RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 SMIM12Q96EX1 92 aa9.92□□□□□ -0.82
CHFR-221ENST00000542714 C8orf49Q96NF6 230 aa9.92□□□□□ -0.82
CHFR-221ENST00000542714 GPR61Q9BZJ8 451 aa9.92□□□□□ -0.82
CHFR-221ENST00000542714 NIPBLQ6KC79 2804 aaeCLIP9.91□□□□□ -0.82
CHFR-221ENST00000542714 TRAV25A0A0B4J276 109 aa9.91□□□□□ -0.82
CHFR-221ENST00000542714 FBLL1A6NHQ2 334 aaKnown RBP9.91□□□□□ -0.82
CHFR-221ENST00000542714 ZNF688P0C7X2 276 aa9.91□□□□□ -0.82
CHFR-221ENST00000542714 LINC00322Q6ZN03 302 aaPredicted RBP9.91□□□□□ -0.82
CHFR-221ENST00000542714 RBPMS2Q6ZRY4 209 aaKnown RBP9.91□□□□□ -0.82
CHFR-221ENST00000542714 ZC2HC1AQ96GY0 325 aa9.91□□□□□ -0.82
CHFR-221ENST00000542714 SFRP2Q96HF1 295 aa9.91□□□□□ -0.82
CHFR-221ENST00000542714 ZNF747Q9BV97 191 aa9.91□□□□□ -0.82
CHFR-221ENST00000542714 ZFP30Q9Y2G7 519 aa9.91□□□□□ -0.82
CHFR-221ENST00000542714 SAP30O75446 220 aa9.9□□□□□ -0.82
CHFR-221ENST00000542714 IGLV1-51P01701 117 aa9.9□□□□□ -0.82
CHFR-221ENST00000542714 MT-ND4LP03901 98 aa9.9□□□□□ -0.82
CHFR-221ENST00000542714 PAFAH1B2P68402 229 aa9.9□□□□□ -0.82
CHFR-221ENST00000542714 PSMG4Q5JS54 123 aa9.9□□□□□ -0.82
CHFR-221ENST00000542714 COX8CQ7Z4L0 72 aa9.9□□□□□ -0.82
CHFR-221ENST00000542714 OR8A1Q8NGG7 326 aa9.9□□□□□ -0.82
CHFR-221ENST00000542714 PRR25Q96S07 402 aa9.9□□□□□ -0.82
CHFR-221ENST00000542714 CTDSP1Q9GZU7 261 aa9.9□□□□□ -0.82
CHFR-221ENST00000542714 RNASE7Q9H1E1 156 aaKnown RBP9.9□□□□□ -0.82
CHFR-221ENST00000542714 OSTCQ9NRP0 149 aa9.9□□□□□ -0.82
CHFR-221ENST00000542714 ZNF492Q9P255 531 aa9.9□□□□□ -0.82
CHFR-221ENST00000542714 C19orf71A6NCJ1 209 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 CT45A10P0DMU9 189 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 CRIP1P50238 77 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 ZNF138P52744 262 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 GDF5OSQ5U4N7 250 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 PRR27Q6MZM9 219 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 FAM231DQ6ZW35 169 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 OR10G8Q8NGN5 311 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 ANAPC16Q96DE5 110 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 YPEL4Q96NS1 127 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 SPAG8Q99932 426 aaPredicted RBP9.89□□□□□ -0.83
CHFR-221ENST00000542714 SMCO4Q9NRQ5 59 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 TMEM242Q9NWH2 141 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 PPP1R14DQ9NXH3 145 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 ZNF256Q9Y2P7 627 aaPredicted RBP9.89□□□□□ -0.83
CHFR-221ENST00000542714 V9GYV3 84 aa9.89□□□□□ -0.83
CHFR-221ENST00000542714 TENM1Q9UKZ4 2725 aa9.88□□□□□ -0.83
CHFR-221ENST00000542714 H7BYZ3 331 aa9.88□□□□□ -0.83
CHFR-221ENST00000542714 ERVFC1-1P60608 527 aa9.88□□□□□ -0.83
CHFR-221ENST00000542714 SNRPD3P62318 126 aaKnown RBP9.88□□□□□ -0.83
CHFR-221ENST00000542714 HIST1H1AQ02539 215 aaPredicted RBP9.88□□□□□ -0.83
CHFR-221ENST00000542714 TMEM78Q5T7P6 136 aa9.88□□□□□ -0.83
CHFR-221ENST00000542714 NUDT10Q8NFP7 164 aa9.88□□□□□ -0.83
CHFR-221ENST00000542714 OR10J6PQ8NGY7 276 aa9.88□□□□□ -0.83
CHFR-221ENST00000542714 NUDT11Q96G61 164 aa9.88□□□□□ -0.83
CHFR-221ENST00000542714 FAM19A4Q96LR4 140 aa9.88□□□□□ -0.83
CHFR-221ENST00000542714 AGRNO00468 2067 aa9.87□□□□□ -0.83
CHFR-221ENST00000542714 A0A0J9YX75 114 aa9.87□□□□□ -0.83
CHFR-221ENST00000542714 OR4C46A6NHA9 309 aa9.87□□□□□ -0.83
CHFR-221ENST00000542714 PPP1R2P9O14990 202 aa9.87□□□□□ -0.83
CHFR-221ENST00000542714 ZNF80P51504 273 aaPredicted RBP9.87□□□□□ -0.83
CHFR-221ENST00000542714 SAPCD1Q5SSQ6 148 aa9.87□□□□□ -0.83
CHFR-221ENST00000542714 IBA57Q5T440 356 aaKnown RBP9.87□□□□□ -0.83
CHFR-221ENST00000542714 OR2K2Q8NGT1 345 aa9.87□□□□□ -0.83
CHFR-221ENST00000542714 TUBA4BQ9H853 241 aa9.87□□□□□ -0.83
CHFR-221ENST00000542714 MAP6D1Q9H9H5 199 aa9.87□□□□□ -0.83
CHFR-221ENST00000542714 SORL1Q92673 2214 aa9.86□□□□□ -0.83
CHFR-221ENST00000542714 CD33P20138 364 aa9.86□□□□□ -0.83
CHFR-221ENST00000542714 DEFB131AP59861 70 aa9.86□□□□□ -0.83
CHFR-221ENST00000542714 ATRQ13535 2644 aa9.86□□□□□ -0.83
CHFR-221ENST00000542714 ODF3L2Q3SX64 289 aa9.86□□□□□ -0.83
CHFR-221ENST00000542714 PRR9Q5T870 116 aa9.86□□□□□ -0.83
CHFR-221ENST00000542714 C15orf54Q8N8G6 183 aa9.86□□□□□ -0.83
CHFR-221ENST00000542714 LINC00477Q96M19 166 aa9.86□□□□□ -0.83
CHFR-221ENST00000542714 NDFIP1Q9BT67 221 aa9.86□□□□□ -0.83
CHFR-221ENST00000542714 SAV1Q9H4B6 383 aaPredicted RBP9.86□□□□□ -0.83
CHFR-221ENST00000542714 BIN3Q9NQY0 253 aa9.86□□□□□ -0.83
CHFR-221ENST00000542714 LENEPQ9Y5L5 61 aa9.86□□□□□ -0.83
CHFR-221ENST00000542714 CXorf65A6NEN9 183 aa9.85□□□□□ -0.83
CHFR-221ENST00000542714 KNCNA6PVL3 124 aa9.85□□□□□ -0.83
CHFR-221ENST00000542714 GATCO43716 136 aaKnown RBP9.85□□□□□ -0.83
CHFR-221ENST00000542714 SH2D1AO60880 128 aa9.85□□□□□ -0.83
CHFR-221ENST00000542714 PFN1P07737 140 aaKnown RBP9.85□□□□□ -0.83
CHFR-221ENST00000542714 ZNF124Q15973 351 aa9.85□□□□□ -0.83
CHFR-221ENST00000542714 FOXI2Q6ZQN5 318 aa9.85□□□□□ -0.83
CHFR-221ENST00000542714 ZFAND2AQ8N6M9 145 aa9.85□□□□□ -0.83
CHFR-221ENST00000542714 TMEM158Q8WZ71 300 aa9.85□□□□□ -0.83
CHFR-221ENST00000542714 COLCA2A8K830 154 aa9.84□□□□□ -0.83
CHFR-221ENST00000542714 A8MTW9 85 aa9.84□□□□□ -0.83
CHFR-221ENST00000542714 CA1P00915 261 aaPredicted RBP9.84□□□□□ -0.83
CHFR-221ENST00000542714 ELOBQ15370 118 aa9.84□□□□□ -0.83
CHFR-221ENST00000542714 BEAN1Q3B7T3 259 aa9.84□□□□□ -0.83
CHFR-221ENST00000542714 SMUG1Q53HV7 270 aa9.84□□□□□ -0.83
CHFR-221ENST00000542714 SHISA2Q6UWI4 295 aa9.84□□□□□ -0.83
CHFR-221ENST00000542714 C12orf54Q6X4T0 127 aa9.84□□□□□ -0.83
CHFR-221ENST00000542714 C3orf56Q8N813 242 aa9.84□□□□□ -0.83
CHFR-221ENST00000542714 RPP21Q9H633 154 aaKnown RBP9.84□□□□□ -0.83
CHFR-221ENST00000542714 IL36BQ9NZH7 164 aa9.84□□□□□ -0.83
CHFR-221ENST00000542714 URGCP-MRPS24S4R325 110 aa9.84□□□□□ -0.83
CHFR-221ENST00000542714 FBN1P35555 2871 aaKnown RBP9.84□□□□□ -0.83
CHFR-221ENST00000542714 ZNF705GA8MUZ8 300 aaPredicted RBP9.83□□□□□ -0.84
CHFR-221ENST00000542714 CXCL1P09341 107 aa9.83□□□□□ -0.84
CHFR-221ENST00000542714 CRISP2P16562 243 aa9.83□□□□□ -0.84
CHFR-221ENST00000542714 KIR3DS1Q14943 382 aa9.83□□□□□ -0.84
CHFR-221ENST00000542714 FAM162BQ5T6X4 162 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms