RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 ARL14EPLP0DKL9 152 aa11.17□□□□□ -0.62
SPTB-205ENST00000542694 C16orf74Q96GX8 76 aa11.17□□□□□ -0.62
SPTB-205ENST00000542694 SH3BGRL3Q9H299 93 aa11.17□□□□□ -0.62
SPTB-205ENST00000542694 LENEPQ9Y5L5 61 aa11.17□□□□□ -0.62
SPTB-205ENST00000542694 CTXND1A0A1B0GTU2 59 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 SERTM2A0A1B0GWG4 89 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 LYRM9A8MSI8 78 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 ZNF705GA8MUZ8 300 aaPredicted RBP11.16□□□□□ -0.62
SPTB-205ENST00000542694 SMLR1H3BR10 107 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 GPX1P07203 203 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 CRISP2P16562 243 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 GCHFRP30047 84 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 ZNF138P52744 262 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 ERCC8Q13216 396 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 Q6ZNX1 250 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 TMED6Q8WW62 240 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 PYGO2Q9BRQ0 406 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 ZNF492Q9P255 531 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 DKK2Q9UBU2 259 aa11.16□□□□□ -0.62
SPTB-205ENST00000542694 LCE6AA0A183 80 aa11.15□□□□□ -0.62
SPTB-205ENST00000542694 C7orf71A4D174 169 aa11.15□□□□□ -0.62
SPTB-205ENST00000542694 DIRC3C9JPN6 131 aa11.15□□□□□ -0.62
SPTB-205ENST00000542694 K7EQM0 130 aa11.15□□□□□ -0.62
SPTB-205ENST00000542694 PFDN1O60925 122 aa11.15□□□□□ -0.62
SPTB-205ENST00000542694 GFI1BQ5VTD9 330 aa11.15□□□□□ -0.62
SPTB-205ENST00000542694 STOML3Q8TAV4 291 aa11.15□□□□□ -0.62
SPTB-205ENST00000542694 SUN5Q8TC36 379 aa11.15□□□□□ -0.62
SPTB-205ENST00000542694 HYLS1Q96M11 299 aa11.15□□□□□ -0.62
SPTB-205ENST00000542694 NKX6-2Q9C056 277 aaPredicted RBP11.15□□□□□ -0.62
SPTB-205ENST00000542694 CYTL1Q9NRR1 136 aa11.15□□□□□ -0.62
SPTB-205ENST00000542694 YTHDF2Q9Y5A9 579 aaKnown RBP11.15□□□□□ -0.62
SPTB-205ENST00000542694 IGKV2-40A0A087WW87 121 aaPredicted RBP11.14□□□□□ -0.63
SPTB-205ENST00000542694 A0A1B0GVG6 124 aa11.14□□□□□ -0.63
SPTB-205ENST00000542694 KLLNB2CW77 178 aa11.14□□□□□ -0.63
SPTB-205ENST00000542694 UMAD1C9J7I0 102 aa11.14□□□□□ -0.63
SPTB-205ENST00000542694 HMGB3O15347 200 aaKnown RBP11.14□□□□□ -0.63
SPTB-205ENST00000542694 IGKV2D-40P01614 121 aaPredicted RBP11.14□□□□□ -0.63
SPTB-205ENST00000542694 SEC11BP0C7V7 166 aa11.14□□□□□ -0.63
SPTB-205ENST00000542694 HTN1P15515 57 aa11.14□□□□□ -0.63
SPTB-205ENST00000542694 C12orf74Q32Q52 190 aa11.14□□□□□ -0.63
SPTB-205ENST00000542694 FAM222AQ5U5X8 452 aa11.14□□□□□ -0.63
SPTB-205ENST00000542694 TCTE3Q8IZS6 198 aa11.14□□□□□ -0.63
SPTB-205ENST00000542694 TMEM263Q8WUH6 116 aaKnown RBP11.14□□□□□ -0.63
SPTB-205ENST00000542694 ST6GAL2Q96JF0 529 aa11.14□□□□□ -0.63
SPTB-205ENST00000542694 FAM19A4Q96LR4 140 aa11.14□□□□□ -0.63
SPTB-205ENST00000542694 VGLL1Q99990 258 aa11.14□□□□□ -0.63
SPTB-205ENST00000542694 TIMM8BQ9Y5J9 83 aaPredicted RBP11.14□□□□□ -0.63
SPTB-205ENST00000542694 DEFB131BA0A096LNP1 70 aa11.13□□□□□ -0.63
SPTB-205ENST00000542694 TRAV12-3A0A0B4J271 114 aa11.13□□□□□ -0.63
SPTB-205ENST00000542694 FBLL1A6NHQ2 334 aaKnown RBP11.13□□□□□ -0.63
SPTB-205ENST00000542694 BCL2L11O43521 198 aa11.13□□□□□ -0.63
SPTB-205ENST00000542694 DAD1P61803 113 aa11.13□□□□□ -0.63
SPTB-205ENST00000542694 EIF5AL1Q6IS14 154 aaKnown RBP11.13□□□□□ -0.63
SPTB-205ENST00000542694 Q6ZTC4 211 aa11.13□□□□□ -0.63
SPTB-205ENST00000542694 OR11H4Q8NGC9 324 aa11.13□□□□□ -0.63
SPTB-205ENST00000542694 FAM210BQ96KR6 192 aa11.13□□□□□ -0.63
SPTB-205ENST00000542694 ZNF471Q9BX82 626 aaPredicted RBP11.13□□□□□ -0.63
SPTB-205ENST00000542694 CELA1Q9UNI1 258 aa11.13□□□□□ -0.63
SPTB-205ENST00000542694 CSMD3Q7Z407 3707 aa11.13□□□□□ -0.63
SPTB-205ENST00000542694 A0A1W2PRE2 83 aa11.12□□□□□ -0.63
SPTB-205ENST00000542694 J3KRW8 73 aa11.12□□□□□ -0.63
SPTB-205ENST00000542694 PRB4P10163 310 aaPredicted RBP11.12□□□□□ -0.63
SPTB-205ENST00000542694 RNASE4P34096 147 aaKnown RBP11.12□□□□□ -0.63
SPTB-205ENST00000542694 IQCF2Q8IXL9 164 aa11.12□□□□□ -0.63
SPTB-205ENST00000542694 C5orf17Q8NAS9 161 aa11.12□□□□□ -0.63
SPTB-205ENST00000542694 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
SPTB-205ENST00000542694 BOLA1Q9Y3E2 137 aa11.12□□□□□ -0.63
SPTB-205ENST00000542694 IGLL5B9A064 214 aa11.11□□□□□ -0.63
SPTB-205ENST00000542694 TPT1P13693 172 aaKnown RBP11.11□□□□□ -0.63
SPTB-205ENST00000542694 DPPA3Q6W0C5 159 aa11.11□□□□□ -0.63
SPTB-205ENST00000542694 TMUB2Q71RG4 321 aa11.11□□□□□ -0.63
SPTB-205ENST00000542694 ZNF680Q8NEM1 530 aa11.11□□□□□ -0.63
SPTB-205ENST00000542694 NDFIP1Q9BT67 221 aa11.11□□□□□ -0.63
SPTB-205ENST00000542694 SNURFLB1AK76 121 aa11.1□□□□□ -0.63
SPTB-205ENST00000542694 ZNF324O75467 553 aaPredicted RBP11.1□□□□□ -0.63
SPTB-205ENST00000542694 EIF3GO75821 320 aaKnown RBP eCLIP11.1□□□□□ -0.63
SPTB-205ENST00000542694 AZU1P20160 251 aa11.1□□□□□ -0.63
SPTB-205ENST00000542694 SUMO1P63165 101 aaKnown RBP11.1□□□□□ -0.63
SPTB-205ENST00000542694 GOLT1AQ6ZVE7 132 aa11.1□□□□□ -0.63
SPTB-205ENST00000542694 AKAP14Q86UN6 197 aa11.1□□□□□ -0.63
SPTB-205ENST00000542694 ZFAND2AQ8N6M9 145 aa11.1□□□□□ -0.63
SPTB-205ENST00000542694 RGS13O14921 159 aa11.09□□□□□ -0.63
SPTB-205ENST00000542694 C1QBP02746 253 aa11.09□□□□□ -0.63
SPTB-205ENST00000542694 KIR3DS1Q14943 382 aa11.09□□□□□ -0.63
SPTB-205ENST00000542694 ANXA2RQ3ZCQ2 193 aa11.09□□□□□ -0.63
SPTB-205ENST00000542694 LGALSLQ3ZCW2 172 aaPredicted RBP11.09□□□□□ -0.63
SPTB-205ENST00000542694 EIF4E3Q8N5X7 224 aaKnown RBP11.09□□□□□ -0.63
SPTB-205ENST00000542694 RNASE8Q8TDE3 154 aaKnown RBP11.09□□□□□ -0.63
SPTB-205ENST00000542694 RPH3ALQ9UNE2 315 aa11.09□□□□□ -0.63
SPTB-205ENST00000542694 MAP1LC3B2A6NCE7 125 aa11.08□□□□□ -0.64
SPTB-205ENST00000542694 CBY3A6NI87 242 aa11.08□□□□□ -0.64
SPTB-205ENST00000542694 F6UZH7 168 aa11.08□□□□□ -0.64
SPTB-205ENST00000542694 RAB5CP51148 216 aa11.08□□□□□ -0.64
SPTB-205ENST00000542694 CD300CQ08708 224 aa11.08□□□□□ -0.64
SPTB-205ENST00000542694 BTN1A1Q13410 526 aa11.08□□□□□ -0.64
SPTB-205ENST00000542694 ZNF767PQ75MW2 155 aa11.08□□□□□ -0.64
SPTB-205ENST00000542694 NDUFAF3Q9BU61 184 aa11.08□□□□□ -0.64
SPTB-205ENST00000542694 MAP1LC3BQ9GZQ8 125 aa11.08□□□□□ -0.64
SPTB-205ENST00000542694 EPDR1Q9UM22 224 aa11.08□□□□□ -0.64
SPTB-205ENST00000542694 IFNA7P01567 189 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms