RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 WDR61Q9GZS3 305 aaKnown RBP11.28□□□□□ -0.6
TRIM65-203ENST00000540812 Q9H8V8 135 aa11.28□□□□□ -0.6
TRIM65-203ENST00000540812 PXMP4Q9Y6I8 212 aa11.28□□□□□ -0.6
TRIM65-203ENST00000540812 A0A0J9YY99 117 aa11.27□□□□□ -0.61
TRIM65-203ENST00000540812 J3KRW8 73 aa11.27□□□□□ -0.61
TRIM65-203ENST00000540812 HOXA5P20719 270 aa11.27□□□□□ -0.61
TRIM65-203ENST00000540812 MAPKAPK5-AS1Q8N8E1 139 aa11.27□□□□□ -0.61
TRIM65-203ENST00000540812 OR10J6PQ8NGY7 276 aa11.27□□□□□ -0.61
TRIM65-203ENST00000540812 GNPNAT1Q96EK6 184 aaPredicted RBP11.27□□□□□ -0.61
TRIM65-203ENST00000540812 C20orf144Q9BQM9 153 aa11.27□□□□□ -0.61
TRIM65-203ENST00000540812 KCNIP2Q9NS61 270 aa11.27□□□□□ -0.61
TRIM65-203ENST00000540812 GAGE12BA1L429 117 aa11.26□□□□□ -0.61
TRIM65-203ENST00000540812 H3BQ15 152 aa11.26□□□□□ -0.61
TRIM65-203ENST00000540812 GAGE7O76087 117 aa11.26□□□□□ -0.61
TRIM65-203ENST00000540812 GAGE12FP0CL80 117 aa11.26□□□□□ -0.61
TRIM65-203ENST00000540812 GAGE12GP0CL81 117 aa11.26□□□□□ -0.61
TRIM65-203ENST00000540812 GAGE12IP0CL82 117 aa11.26□□□□□ -0.61
TRIM65-203ENST00000540812 IGLC2P0DOY2 106 aa11.26□□□□□ -0.61
TRIM65-203ENST00000540812 SPATA12Q7Z6I5 190 aa11.26□□□□□ -0.61
TRIM65-203ENST00000540812 BPIFA4PQ86YQ2 179 aa11.26□□□□□ -0.61
TRIM65-203ENST00000540812 RXFP4Q8TDU9 374 aa11.26□□□□□ -0.61
TRIM65-203ENST00000540812 AQP10Q96PS8 301 aa11.26□□□□□ -0.61
TRIM65-203ENST00000540812 TRAV5A0A0B4J249 113 aa11.25□□□□□ -0.61
TRIM65-203ENST00000540812 C17orf112F2Z3M2 114 aa11.25□□□□□ -0.61
TRIM65-203ENST00000540812 IFNA5P01569 189 aa11.25□□□□□ -0.61
TRIM65-203ENST00000540812 CT45A10P0DMU9 189 aa11.25□□□□□ -0.61
TRIM65-203ENST00000540812 M6PRP20645 277 aa11.25□□□□□ -0.61
TRIM65-203ENST00000540812 ESRGQ1W209 222 aa11.25□□□□□ -0.61
TRIM65-203ENST00000540812 Q5BKY6 102 aa11.25□□□□□ -0.61
TRIM65-203ENST00000540812 CCDC28AQ8IWP9 274 aa11.25□□□□□ -0.61
TRIM65-203ENST00000540812 OR2T35Q8NGX2 323 aa11.25□□□□□ -0.61
TRIM65-203ENST00000540812 SAT2Q96F10 170 aaPredicted RBP11.25□□□□□ -0.61
TRIM65-203ENST00000540812 SMIM3Q9BZL3 60 aa11.25□□□□□ -0.61
TRIM65-203ENST00000540812 SCGB1C1Q8TD33 95 aa11.24□□□□□ -0.61
TRIM65-203ENST00000540812 ZNF503Q96F45 646 aa11.24□□□□□ -0.61
TRIM65-203ENST00000540812 TRAV12-3A0A0B4J271 114 aa11.23□□□□□ -0.61
TRIM65-203ENST00000540812 INO80EQ8NBZ0 244 aaPredicted RBP11.23□□□□□ -0.61
TRIM65-203ENST00000540812 UPK3BQ9BT76 320 aa11.23□□□□□ -0.61
TRIM65-203ENST00000540812 Q9H3A6 140 aa11.23□□□□□ -0.61
TRIM65-203ENST00000540812 TMPRSS5Q9H3S3 457 aa11.23□□□□□ -0.61
TRIM65-203ENST00000540812 WFDC1Q9HC57 220 aa11.23□□□□□ -0.61
TRIM65-203ENST00000540812 HERC1Q15751 4861 aa11.22□□□□□ -0.61
TRIM65-203ENST00000540812 SNURFLB1AK76 121 aa11.22□□□□□ -0.61
TRIM65-203ENST00000540812 LEPP41159 167 aa11.22□□□□□ -0.61
TRIM65-203ENST00000540812 KRTAP10-2P60368 255 aa11.22□□□□□ -0.61
TRIM65-203ENST00000540812 ZNF266Q14584 549 aa11.22□□□□□ -0.61
TRIM65-203ENST00000540812 TTC32Q5I0X7 151 aa11.22□□□□□ -0.61
TRIM65-203ENST00000540812 Q6ZTI0 123 aa11.22□□□□□ -0.61
TRIM65-203ENST00000540812 ODF3Q96PU9 254 aa11.22□□□□□ -0.61
TRIM65-203ENST00000540812 NPIPB6E9PJ23 425 aa11.21□□□□□ -0.61
TRIM65-203ENST00000540812 G3V3Q6 166 aa11.21□□□□□ -0.61
TRIM65-203ENST00000540812 GCSAMLQ5JQS6 135 aa11.21□□□□□ -0.61
TRIM65-203ENST00000540812 ZNF586Q9NXT0 402 aa11.21□□□□□ -0.61
TRIM65-203ENST00000540812 TNFSF18Q9UNG2 199 aa11.21□□□□□ -0.61
TRIM65-203ENST00000540812 MRPS16Q9Y3D3 137 aaKnown RBP11.21□□□□□ -0.61
TRIM65-203ENST00000540812 FXYD6-FXYD2A0A087WZ82 144 aa11.2□□□□□ -0.62
TRIM65-203ENST00000540812 GUK1Q16774 197 aa11.2□□□□□ -0.62
TRIM65-203ENST00000540812 VSIG2Q96IQ7 327 aa11.2□□□□□ -0.62
TRIM65-203ENST00000540812 PYGO2Q9BRQ0 406 aa11.2□□□□□ -0.62
TRIM65-203ENST00000540812 MRPL32Q9BYC8 188 aaKnown RBP11.2□□□□□ -0.62
TRIM65-203ENST00000540812 TMEM14CQ9P0S9 112 aa11.2□□□□□ -0.62
TRIM65-203ENST00000540812 RNF222A6NCQ9 220 aa11.19□□□□□ -0.62
TRIM65-203ENST00000540812 H3BNG1 76 aa11.19□□□□□ -0.62
TRIM65-203ENST00000540812 M0R3E3 92 aa11.19□□□□□ -0.62
TRIM65-203ENST00000540812 DAZ2Q13117 558 aaKnown RBP11.19□□□□□ -0.62
TRIM65-203ENST00000540812 ERCC8Q13216 396 aa11.19□□□□□ -0.62
TRIM65-203ENST00000540812 FFAR4Q5NUL3 377 aa11.19□□□□□ -0.62
TRIM65-203ENST00000540812 Q8N1X5 172 aa11.19□□□□□ -0.62
TRIM65-203ENST00000540812 C11orf72Q8NBR9 251 aa11.19□□□□□ -0.62
TRIM65-203ENST00000540812 GSN-AS1Q9NRJ2 163 aa11.19□□□□□ -0.62
TRIM65-203ENST00000540812 TIMM9Q9Y5J7 89 aa11.19□□□□□ -0.62
TRIM65-203ENST00000540812 VPS13BQ7Z7G8 4022 aa11.19□□□□□ -0.62
TRIM65-203ENST00000540812 A0A096LPF7 62 aa11.18□□□□□ -0.62
TRIM65-203ENST00000540812 A0A1W2PPQ1 181 aa11.18□□□□□ -0.62
TRIM65-203ENST00000540812 SCRT2Q9NQ03 307 aa11.18□□□□□ -0.62
TRIM65-203ENST00000540812 FUT9Q9Y231 359 aa11.18□□□□□ -0.62
TRIM65-203ENST00000540812 C7orf71A4D174 169 aa11.17□□□□□ -0.62
TRIM65-203ENST00000540812 ZNF253O75346 499 aa11.17□□□□□ -0.62
TRIM65-203ENST00000540812 SLC25A5P05141 298 aaKnown RBP11.17□□□□□ -0.62
TRIM65-203ENST00000540812 HIST1H1EP10412 219 aaKnown RBP11.17□□□□□ -0.62
TRIM65-203ENST00000540812 BTF3P20290 206 aaKnown RBP11.17□□□□□ -0.62
TRIM65-203ENST00000540812 CD300CQ08708 224 aa11.17□□□□□ -0.62
TRIM65-203ENST00000540812 BTN1A1Q13410 526 aa11.17□□□□□ -0.62
TRIM65-203ENST00000540812 MIR17HGQ75NE6 70 aa11.17□□□□□ -0.62
TRIM65-203ENST00000540812 FAM167A-AS1Q96KT0 104 aa11.17□□□□□ -0.62
TRIM65-203ENST00000540812 SLC25A2Q9BXI2 301 aa11.17□□□□□ -0.62
TRIM65-203ENST00000540812 TRBV19A0A075B6N1 114 aa11.16□□□□□ -0.62
TRIM65-203ENST00000540812 TRGV2A0A075B6R0 118 aa11.16□□□□□ -0.62
TRIM65-203ENST00000540812 TRGV1A0A0A0MS02 117 aa11.16□□□□□ -0.62
TRIM65-203ENST00000540812 KLLNB2CW77 178 aa11.16□□□□□ -0.62
TRIM65-203ENST00000540812 ZNF324O75467 553 aaPredicted RBP11.16□□□□□ -0.62
TRIM65-203ENST00000540812 NDUFB4O95168 129 aa11.16□□□□□ -0.62
TRIM65-203ENST00000540812 LINC00315P59091 139 aa11.16□□□□□ -0.62
TRIM65-203ENST00000540812 PDE6HQ13956 83 aa11.16□□□□□ -0.62
TRIM65-203ENST00000540812 ACOT6Q3I5F7 207 aaPredicted RBP11.16□□□□□ -0.62
TRIM65-203ENST00000540812 ZNF680Q8NEM1 530 aa11.16□□□□□ -0.62
TRIM65-203ENST00000540812 MRPL53Q96EL3 112 aaKnown RBP11.16□□□□□ -0.62
TRIM65-203ENST00000540812 FAM19A4Q96LR4 140 aa11.16□□□□□ -0.62
TRIM65-203ENST00000540812 PSMG3Q9BT73 122 aaPredicted RBP11.16□□□□□ -0.62
TRIM65-203ENST00000540812 AGPAT4-IT1Q9H0P7 198 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms