RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 ZNF253O75346 499 aa10.05□□□□□ -0.8
MSRB3-209ENST00000540804 IGKV2D-40P01614 121 aaPredicted RBP10.05□□□□□ -0.8
MSRB3-209ENST00000540804 RLN2P04090 185 aa10.05□□□□□ -0.8
MSRB3-209ENST00000540804 ICAM4Q14773 271 aa10.05□□□□□ -0.8
MSRB3-209ENST00000540804 ATP6V1FQ16864 119 aa10.05□□□□□ -0.8
MSRB3-209ENST00000540804 PRR9Q5T870 116 aa10.05□□□□□ -0.8
MSRB3-209ENST00000540804 FAM122CQ6P4D5 195 aa10.05□□□□□ -0.8
MSRB3-209ENST00000540804 C6orf223Q8N319 242 aa10.05□□□□□ -0.8
MSRB3-209ENST00000540804 OR5C1Q8NGR4 320 aa10.05□□□□□ -0.8
MSRB3-209ENST00000540804 GNPNAT1Q96EK6 184 aaPredicted RBP10.05□□□□□ -0.8
MSRB3-209ENST00000540804 FAM167A-AS1Q96KT0 104 aa10.05□□□□□ -0.8
MSRB3-209ENST00000540804 FAM19A4Q96LR4 140 aa10.05□□□□□ -0.8
MSRB3-209ENST00000540804 ODF3Q96PU9 254 aa10.05□□□□□ -0.8
MSRB3-209ENST00000540804 KRTAP1-5Q9BYS1 174 aa10.05□□□□□ -0.8
MSRB3-209ENST00000540804 C7orf71A4D174 169 aa10.04□□□□□ -0.8
MSRB3-209ENST00000540804 ZNF324O75467 553 aaPredicted RBP10.04□□□□□ -0.8
MSRB3-209ENST00000540804 M6PRP20645 277 aa10.04□□□□□ -0.8
MSRB3-209ENST00000540804 RNASE4P34096 147 aaKnown RBP10.04□□□□□ -0.8
MSRB3-209ENST00000540804 ESRGQ1W209 222 aa10.04□□□□□ -0.8
MSRB3-209ENST00000540804 C11orf72Q8NBR9 251 aa10.04□□□□□ -0.8
MSRB3-209ENST00000540804 RXFP4Q8TDU9 374 aa10.04□□□□□ -0.8
MSRB3-209ENST00000540804 MRPL53Q96EL3 112 aaKnown RBP10.04□□□□□ -0.8
MSRB3-209ENST00000540804 VGLL1Q99990 258 aa10.04□□□□□ -0.8
MSRB3-209ENST00000540804 KRTAP4-5Q9BYR2 181 aa10.04□□□□□ -0.8
MSRB3-209ENST00000540804 TP53TG3Q9ULZ0 132 aa10.04□□□□□ -0.8
MSRB3-209ENST00000540804 KLLNB2CW77 178 aa10.03□□□□□ -0.8
MSRB3-209ENST00000540804 EIF3GO75821 320 aaKnown RBP eCLIP10.03□□□□□ -0.8
MSRB3-209ENST00000540804 SLC25A5P05141 298 aaKnown RBP10.03□□□□□ -0.8
MSRB3-209ENST00000540804 ENKURQ8TC29 256 aa10.03□□□□□ -0.8
MSRB3-209ENST00000540804 PYGO2Q9BRQ0 406 aa10.03□□□□□ -0.8
MSRB3-209ENST00000540804 Q9H8V8 135 aa10.03□□□□□ -0.8
MSRB3-209ENST00000540804 KLF12Q9Y4X4 402 aa10.03□□□□□ -0.8
MSRB3-209ENST00000540804 OR10J4P0C629 311 aa10.02□□□□□ -0.81
MSRB3-209ENST00000540804 DAZ2Q13117 558 aaKnown RBP10.02□□□□□ -0.81
MSRB3-209ENST00000540804 VSIG2Q96IQ7 327 aa10.02□□□□□ -0.81
MSRB3-209ENST00000540804 LINC00477Q96M19 166 aa10.02□□□□□ -0.81
MSRB3-209ENST00000540804 DNAH5Q8TE73 4624 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 TRGV1A0A0A0MS02 117 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 E5RGE8 158 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 MPDU1O75352 247 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 UPK1BO75841 260 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 NBEAP1P0C6P0 100 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 H2BFSP57053 126 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 ZFAND2AQ8N6M9 145 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 Q8TAT8 98 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 S100ZQ8WXG8 99 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 FXYD5Q96DB9 178 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 PHYHIPLQ96FC7 376 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 NMES1Q9C002 83 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 WDR61Q9GZS3 305 aaKnown RBP10.01□□□□□ -0.81
MSRB3-209ENST00000540804 OR51M1Q9H341 326 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 PRELID1Q9Y255 219 aa10.01□□□□□ -0.81
MSRB3-209ENST00000540804 APOBP04114 4563 aaKnown RBP10□□□□□ -0.81
MSRB3-209ENST00000540804 TRGV2A0A075B6R0 118 aa10□□□□□ -0.81
MSRB3-209ENST00000540804 IGHV3-53P01767 116 aa10□□□□□ -0.81
MSRB3-209ENST00000540804 GPX1P07203 203 aa10□□□□□ -0.81
MSRB3-209ENST00000540804 CRISP2P16562 243 aa10□□□□□ -0.81
MSRB3-209ENST00000540804 PDE6HQ13956 83 aa10□□□□□ -0.81
MSRB3-209ENST00000540804 C9orf47Q6ZRZ4 202 aa10□□□□□ -0.81
MSRB3-209ENST00000540804 EIF4E3Q8N5X7 224 aaKnown RBP10□□□□□ -0.81
MSRB3-209ENST00000540804 ZNF503Q96F45 646 aa10□□□□□ -0.81
MSRB3-209ENST00000540804 SLC25A31Q9H0C2 315 aa10□□□□□ -0.81
MSRB3-209ENST00000540804 AAMDCQ9H7C9 122 aa10□□□□□ -0.81
MSRB3-209ENST00000540804 FUT9Q9Y231 359 aa10□□□□□ -0.81
MSRB3-209ENST00000540804 A0A096LPF7 62 aa9.99□□□□□ -0.81
MSRB3-209ENST00000540804 C16orf90A8MZG2 172 aa9.99□□□□□ -0.81
MSRB3-209ENST00000540804 INMT-MINDY4F8WBC2 141 aa9.99□□□□□ -0.81
MSRB3-209ENST00000540804 LINC00299Q6ZSB3 139 aa9.99□□□□□ -0.81
MSRB3-209ENST00000540804 PAXXQ9BUH6 204 aa9.99□□□□□ -0.81
MSRB3-209ENST00000540804 MRPL16Q9NX20 251 aaKnown RBP9.99□□□□□ -0.81
MSRB3-209ENST00000540804 SPINK4O60575 86 aa9.98□□□□□ -0.81
MSRB3-209ENST00000540804 RANP62826 216 aaKnown RBP9.98□□□□□ -0.81
MSRB3-209ENST00000540804 ANXA2RQ3ZCQ2 193 aa9.98□□□□□ -0.81
MSRB3-209ENST00000540804 TMEM78Q5T7P6 136 aa9.98□□□□□ -0.81
MSRB3-209ENST00000540804 ZNF680Q8NEM1 530 aa9.98□□□□□ -0.81
MSRB3-209ENST00000540804 PPP1R1CQ8WVI7 109 aa9.98□□□□□ -0.81
MSRB3-209ENST00000540804 LINC00467Q9BRT7 94 aa9.98□□□□□ -0.81
MSRB3-209ENST00000540804 SMIM3Q9BZL3 60 aa9.98□□□□□ -0.81
MSRB3-209ENST00000540804 ZNF492Q9P255 531 aa9.98□□□□□ -0.81
MSRB3-209ENST00000540804 IGHV1OR15-1A0A075B7D0 117 aa9.97□□□□□ -0.81
MSRB3-209ENST00000540804 A6NHS1 94 aa9.97□□□□□ -0.81
MSRB3-209ENST00000540804 RGS13O14921 159 aa9.97□□□□□ -0.81
MSRB3-209ENST00000540804 OR7C2O60412 319 aa9.97□□□□□ -0.81
MSRB3-209ENST00000540804 TCL1AP56279 114 aa9.97□□□□□ -0.81
MSRB3-209ENST00000540804 MUC21Q5SSG8 566 aa9.97□□□□□ -0.81
MSRB3-209ENST00000540804 Q9H3A6 140 aa9.97□□□□□ -0.81
MSRB3-209ENST00000540804 MRPS16Q9Y3D3 137 aaKnown RBP9.97□□□□□ -0.81
MSRB3-209ENST00000540804 H3BNG1 76 aa9.96□□□□□ -0.82
MSRB3-209ENST00000540804 ZNF138P52744 262 aa9.96□□□□□ -0.82
MSRB3-209ENST00000540804 FFAR4Q5NUL3 377 aa9.96□□□□□ -0.82
MSRB3-209ENST00000540804 SPATA12Q7Z6I5 190 aa9.96□□□□□ -0.82
MSRB3-209ENST00000540804 ATP5SQ99766 215 aa9.96□□□□□ -0.82
MSRB3-209ENST00000540804 UPK3BQ9BT76 320 aa9.96□□□□□ -0.82
MSRB3-209ENST00000540804 MRPL32Q9BYC8 188 aaKnown RBP9.96□□□□□ -0.82
MSRB3-209ENST00000540804 WFDC1Q9HC57 220 aa9.96□□□□□ -0.82
MSRB3-209ENST00000540804 HSPB11Q9Y547 144 aa9.96□□□□□ -0.82
MSRB3-209ENST00000540804 PRAF2O60831 178 aa9.95□□□□□ -0.82
MSRB3-209ENST00000540804 MPC2O95563 127 aa9.95□□□□□ -0.82
MSRB3-209ENST00000540804 C18orf15Q96N68 181 aa9.95□□□□□ -0.82
MSRB3-209ENST00000540804 MARVELD1Q9BSK0 173 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms