RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 LCN12Q6JVE5 192 aa10.76□□□□□ -0.69
CYB561A3-216ENST00000540755 Q86TA4 180 aa10.76□□□□□ -0.69
CYB561A3-216ENST00000540755 BAGE2Q86Y30 109 aa10.76□□□□□ -0.69
CYB561A3-216ENST00000540755 NDUFA11Q86Y39 141 aa10.76□□□□□ -0.69
CYB561A3-216ENST00000540755 OR10G8Q8NGN5 311 aa10.76□□□□□ -0.69
CYB561A3-216ENST00000540755 AURKAIP1Q9NWT8 199 aaPredicted RBP10.76□□□□□ -0.69
CYB561A3-216ENST00000540755 LOC105371267A0A1B0GV96 52 aa10.75□□□□□ -0.69
CYB561A3-216ENST00000540755 KRTAP10-3P60369 221 aa10.75□□□□□ -0.69
CYB561A3-216ENST00000540755 RPL11P62913 178 aaKnown RBP10.75□□□□□ -0.69
CYB561A3-216ENST00000540755 ADAMTSL5Q6ZMM2 481 aa10.75□□□□□ -0.69
CYB561A3-216ENST00000540755 RNF182Q8N6D2 247 aa10.75□□□□□ -0.69
CYB561A3-216ENST00000540755 FAM210BQ96KR6 192 aa10.75□□□□□ -0.69
CYB561A3-216ENST00000540755 OSTCQ9NRP0 149 aa10.75□□□□□ -0.69
CYB561A3-216ENST00000540755 TRAV8-1A0A0A6YYK1 113 aa10.74□□□□□ -0.69
CYB561A3-216ENST00000540755 RBAKDNA6NC62 111 aa10.74□□□□□ -0.69
CYB561A3-216ENST00000540755 SGK494Q96LW2 274 aa10.74□□□□□ -0.69
CYB561A3-216ENST00000540755 MLST8Q9BVC4 326 aa10.74□□□□□ -0.69
CYB561A3-216ENST00000540755 PSG8Q9UQ74 426 aa10.74□□□□□ -0.69
CYB561A3-216ENST00000540755 ZFP30Q9Y2G7 519 aa10.74□□□□□ -0.69
CYB561A3-216ENST00000540755 ZNF705FA8MVS1 300 aaPredicted RBP10.74□□□□□ -0.69
CYB561A3-216ENST00000540755 CSN3P07498 182 aa10.74□□□□□ -0.69
CYB561A3-216ENST00000540755 FAM231DQ6ZW35 169 aa10.74□□□□□ -0.69
CYB561A3-216ENST00000540755 TMEM183AQ8IXX5 376 aa10.74□□□□□ -0.69
CYB561A3-216ENST00000540755 DCANP1Q8TF63 244 aa10.74□□□□□ -0.69
CYB561A3-216ENST00000540755 TYMSP04818 313 aa10.73□□□□□ -0.69
CYB561A3-216ENST00000540755 MGST1P10620 155 aaKnown RBP10.73□□□□□ -0.69
CYB561A3-216ENST00000540755 ID1P41134 155 aa10.73□□□□□ -0.69
CYB561A3-216ENST00000540755 RPS10P46783 165 aaKnown RBP10.73□□□□□ -0.69
CYB561A3-216ENST00000540755 OR5I1Q13606 314 aa10.73□□□□□ -0.69
CYB561A3-216ENST00000540755 PRNTQ86SH4 94 aa10.73□□□□□ -0.69
CYB561A3-216ENST00000540755 C20orf173Q96LM9 149 aa10.73□□□□□ -0.69
CYB561A3-216ENST00000540755 MS4A6AQ9H2W1 248 aa10.73□□□□□ -0.69
CYB561A3-216ENST00000540755 SRD5A3Q9H8P0 318 aa10.73□□□□□ -0.69
CYB561A3-216ENST00000540755 URGCP-MRPS24S4R325 110 aa10.73□□□□□ -0.69
CYB561A3-216ENST00000540755 IGKV3-7A0A075B6H7 116 aa10.72□□□□□ -0.69
CYB561A3-216ENST00000540755 IGKV2-40A0A087WW87 121 aaPredicted RBP10.72□□□□□ -0.69
CYB561A3-216ENST00000540755 PRAC2D3DTV9 90 aa10.72□□□□□ -0.69
CYB561A3-216ENST00000540755 OVOL1O14753 267 aa10.72□□□□□ -0.69
CYB561A3-216ENST00000540755 IGKV2D-40P01614 121 aaPredicted RBP10.72□□□□□ -0.69
CYB561A3-216ENST00000540755 FAM3BP58499 235 aaPredicted RBP10.72□□□□□ -0.69
CYB561A3-216ENST00000540755 NSUN5P1Q3KNT7 163 aa10.72□□□□□ -0.69
CYB561A3-216ENST00000540755 COX19Q49B96 90 aa10.72□□□□□ -0.69
CYB561A3-216ENST00000540755 NHLRC2Q8NBF2 726 aa10.72□□□□□ -0.69
CYB561A3-216ENST00000540755 SIGLEC8Q9NYZ4 499 aa10.72□□□□□ -0.69
CYB561A3-216ENST00000540755 IL36BQ9NZH7 164 aa10.72□□□□□ -0.69
CYB561A3-216ENST00000540755 K7EQG2 157 aa10.71□□□□□ -0.69
CYB561A3-216ENST00000540755 CXCL1P09341 107 aa10.71□□□□□ -0.69
CYB561A3-216ENST00000540755 ERVFC1-1P60608 527 aa10.71□□□□□ -0.69
CYB561A3-216ENST00000540755 ZNF738Q8NE65 137 aa10.71□□□□□ -0.69
CYB561A3-216ENST00000540755 VGLL1Q99990 258 aa10.71□□□□□ -0.69
CYB561A3-216ENST00000540755 SELENOKQ9Y6D0 94 aa10.71□□□□□ -0.69
CYB561A3-216ENST00000540755 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
CYB561A3-216ENST00000540755 TRAV2A0A0B4J234 112 aa10.7□□□□□ -0.7
CYB561A3-216ENST00000540755 S100A6P06703 90 aa10.7□□□□□ -0.7
CYB561A3-216ENST00000540755 PAFAH1B2P68402 229 aa10.7□□□□□ -0.7
CYB561A3-216ENST00000540755 SAPCD1Q5SSQ6 148 aa10.7□□□□□ -0.7
CYB561A3-216ENST00000540755 IBA57Q5T440 356 aaKnown RBP10.7□□□□□ -0.7
CYB561A3-216ENST00000540755 COX8CQ7Z4L0 72 aa10.7□□□□□ -0.7
CYB561A3-216ENST00000540755 GBGT1Q8N5D6 347 aa10.7□□□□□ -0.7
CYB561A3-216ENST00000540755 DYNLRB2Q8TF09 96 aa10.7□□□□□ -0.7
CYB561A3-216ENST00000540755 ZNF492Q9P255 531 aa10.7□□□□□ -0.7
CYB561A3-216ENST00000540755 CMYA5Q8N3K9 4069 aa10.7□□□□□ -0.7
CYB561A3-216ENST00000540755 PRKDCP78527 4128 aaKnown RBP10.7□□□□□ -0.7
CYB561A3-216ENST00000540755 PRB4P10163 310 aaPredicted RBP10.69□□□□□ -0.7
CYB561A3-216ENST00000540755 DEFB114Q30KQ6 69 aa10.69□□□□□ -0.7
CYB561A3-216ENST00000540755 C9orf47Q6ZRZ4 202 aa10.69□□□□□ -0.7
CYB561A3-216ENST00000540755 RNASE7Q9H1E1 156 aaKnown RBP10.69□□□□□ -0.7
CYB561A3-216ENST00000540755 PPP1R14DQ9NXH3 145 aa10.69□□□□□ -0.7
CYB561A3-216ENST00000540755 SNRPD3P62318 126 aaKnown RBP10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 RBPMS2Q6ZRY4 209 aaKnown RBP10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 WFDC3Q8IUB2 231 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 PRR25Q96S07 402 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 CITED1Q99966 193 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 NDFIP1Q9BT67 221 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 V9GYV3 84 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 TRAV25A0A0B4J276 109 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 C19orf71A6NCJ1 209 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 ERCC8Q13216 396 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 CT83Q5H943 113 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 TMEM78Q5T7P6 136 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 PRR27Q6MZM9 219 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 ZC2HC1AQ96GY0 325 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 AGPAT4-IT1Q9H0P7 198 aa10.68□□□□□ -0.7
CYB561A3-216ENST00000540755 A0A1W2PPQ1 181 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 NPIPB6E9PJ23 425 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 TFPI2P48307 235 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 ZNF138P52744 262 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 TMEM61Q8N0U2 210 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 NUDT10Q8NFP7 164 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 OR8A1Q8NGG7 326 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 OR10J6PQ8NGY7 276 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 Q8TAT8 98 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 NUDT11Q96G61 164 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 LINC00477Q96M19 166 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 C8orf49Q96NF6 230 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 LENEPQ9Y5L5 61 aa10.67□□□□□ -0.7
CYB561A3-216ENST00000540755 FAM231BA6NCW3 169 aa10.66□□□□□ -0.7
CYB561A3-216ENST00000540755 ZNF705GA8MUZ8 300 aaPredicted RBP10.66□□□□□ -0.7
CYB561A3-216ENST00000540755 GATCO43716 136 aaKnown RBP10.66□□□□□ -0.7
CYB561A3-216ENST00000540755 CT45A10P0DMU9 189 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms