RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 DEFB104AQ8WTQ1 72 aa13.26□□□□□ -0.29
EPB41L3-204ENST00000540638 PRR25Q96S07 402 aa13.26□□□□□ -0.29
EPB41L3-204ENST00000540638 PRSS22Q9GZN4 317 aa13.26□□□□□ -0.29
EPB41L3-204ENST00000540638 ZNF492Q9P255 531 aa13.26□□□□□ -0.29
EPB41L3-204ENST00000540638 MOB4Q9Y3A3 225 aa13.26□□□□□ -0.29
EPB41L3-204ENST00000540638 CELSR2Q9HCU4 2923 aa13.26□□□□□ -0.29
EPB41L3-204ENST00000540638 HSBP1L1C9JCN9 74 aa13.26□□□□□ -0.29
EPB41L3-204ENST00000540638 MSRB1Q9NZV6 116 aa13.26□□□□□ -0.29
EPB41L3-204ENST00000540638 PRRC2AP48634 2157 aaKnown RBP13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 IGKV3-20P01619 116 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 EVI2AP22794 236 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 OR4B1Q8NGF8 309 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 AP5S1Q9NUS5 200 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 hDV102S1A0JD36 115 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 ZNF80P51504 273 aaPredicted RBP13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 PAX8Q06710 450 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 Q8N6K4 173 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 FER1L6-AS1Q8NA97 138 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 ZNF502Q8TBZ5 544 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 CCDC140Q96MF4 163 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 C18orf15Q96N68 181 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 TMEM70Q9BUB7 260 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 KLK15Q9H2R5 256 aa13.25□□□□□ -0.29
EPB41L3-204ENST00000540638 TCAPO15273 167 aa13.24□□□□□ -0.29
EPB41L3-204ENST00000540638 SAPCD1Q5SSQ6 148 aa13.24□□□□□ -0.29
EPB41L3-204ENST00000540638 Q6ZS46 218 aa13.24□□□□□ -0.29
EPB41L3-204ENST00000540638 USP24Q9UPU5 2620 aa13.24□□□□□ -0.29
EPB41L3-204ENST00000540638 C20orf202A1L168 122 aa13.24□□□□□ -0.29
EPB41L3-204ENST00000540638 OR4C46A6NHA9 309 aa13.24□□□□□ -0.29
EPB41L3-204ENST00000540638 KHDC1LQ5JSQ8 128 aa13.24□□□□□ -0.29
EPB41L3-204ENST00000540638 SMAD5-AS1Q9Y6J3 95 aa13.24□□□□□ -0.29
EPB41L3-204ENST00000540638 ZNF25P17030 456 aaPredicted RBP13.24□□□□□ -0.29
EPB41L3-204ENST00000540638 C5orf56Q8N8D9 126 aa13.24□□□□□ -0.29
EPB41L3-204ENST00000540638 MIEN1Q9BRT3 115 aa13.24□□□□□ -0.29
EPB41L3-204ENST00000540638 ZMAT5Q9UDW3 170 aaKnown RBP13.24□□□□□ -0.29
EPB41L3-204ENST00000540638 S100A7P31151 101 aa13.23□□□□□ -0.29
EPB41L3-204ENST00000540638 RASL11AQ6T310 242 aa13.23□□□□□ -0.29
EPB41L3-204ENST00000540638 ERASQ7Z444 233 aa13.23□□□□□ -0.29
EPB41L3-204ENST00000540638 LYPD1Q8N2G4 141 aa13.23□□□□□ -0.29
EPB41L3-204ENST00000540638 CSMD2Q7Z408 3487 aa13.23□□□□□ -0.29
EPB41L3-204ENST00000540638 OR5AL1P0C617 328 aa13.23□□□□□ -0.29
EPB41L3-204ENST00000540638 S100A4P26447 101 aaKnown RBP13.23□□□□□ -0.29
EPB41L3-204ENST00000540638 IFI27P40305 119 aaPredicted RBP13.23□□□□□ -0.29
EPB41L3-204ENST00000540638 PRELID3AQ96N28 172 aa13.23□□□□□ -0.29
EPB41L3-204ENST00000540638 IGHV1-24A0A0C4DH33 117 aa13.23□□□□□ -0.29
EPB41L3-204ENST00000540638 A0A1B0GXF2 115 aa13.22□□□□□ -0.29
EPB41L3-204ENST00000540638 BMI1P35226 326 aa13.22□□□□□ -0.29
EPB41L3-204ENST00000540638 LINC00469Q8N7U9 141 aa13.22□□□□□ -0.29
EPB41L3-204ENST00000540638 MAP1LC3CQ9BXW4 147 aa13.22□□□□□ -0.29
EPB41L3-204ENST00000540638 PAX2Q02962 417 aa13.22□□□□□ -0.29
EPB41L3-204ENST00000540638 KLHDC1Q8N7A1 406 aa13.22□□□□□ -0.29
EPB41L3-204ENST00000540638 WIPF2Q8TF74 440 aaPredicted RBP13.22□□□□□ -0.29
EPB41L3-204ENST00000540638 C2CD3Q4AC94 2353 aa13.21□□□□□ -0.29
EPB41L3-204ENST00000540638 BUB3O43684 328 aa13.21□□□□□ -0.29
EPB41L3-204ENST00000540638 MSMBP08118 114 aa13.21□□□□□ -0.29
EPB41L3-204ENST00000540638 HIST1H1AQ02539 215 aaPredicted RBP13.21□□□□□ -0.29
EPB41L3-204ENST00000540638 PDE6HQ13956 83 aa13.21□□□□□ -0.29
EPB41L3-204ENST00000540638 DNLZQ5SXM8 178 aa13.21□□□□□ -0.29
EPB41L3-204ENST00000540638 UNQ9165/PRO28630Q6UXU0 137 aa13.21□□□□□ -0.29
EPB41L3-204ENST00000540638 TEX43Q6ZNM6 134 aa13.21□□□□□ -0.29
EPB41L3-204ENST00000540638 Q6ZQT7 251 aa13.21□□□□□ -0.29
EPB41L3-204ENST00000540638 F6UB75 175 aa13.21□□□□□ -0.29
EPB41L3-204ENST00000540638 SMIM12Q96EX1 92 aa13.21□□□□□ -0.29
EPB41L3-204ENST00000540638 FAM106AQ4KMX7 169 aa13.21□□□□□ -0.3
EPB41L3-204ENST00000540638 FABP5P3A8MUU1 101 aa13.2□□□□□ -0.3
EPB41L3-204ENST00000540638 CT83Q5H943 113 aa13.2□□□□□ -0.3
EPB41L3-204ENST00000540638 SPANXN1Q5VSR9 72 aa13.2□□□□□ -0.3
EPB41L3-204ENST00000540638 CYB5R2Q6BCY4 276 aa13.2□□□□□ -0.3
EPB41L3-204ENST00000540638 MRPS12O15235 138 aaKnown RBP13.2□□□□□ -0.3
EPB41L3-204ENST00000540638 EBI3Q14213 229 aa13.2□□□□□ -0.3
EPB41L3-204ENST00000540638 C8orf86Q6ZUL3 223 aa13.2□□□□□ -0.3
EPB41L3-204ENST00000540638 C10orf105Q8TEF2 133 aa13.2□□□□□ -0.3
EPB41L3-204ENST00000540638 OVOL3O00110 214 aa13.2□□□□□ -0.3
EPB41L3-204ENST00000540638 ESDP10768 282 aa13.19□□□□□ -0.3
EPB41L3-204ENST00000540638 KIR2DL5BA0A0G2JN68 375 aa13.19□□□□□ -0.3
EPB41L3-204ENST00000540638 KIR2DL5BA0A0G2JPC4 375 aa13.19□□□□□ -0.3
EPB41L3-204ENST00000540638 M0R381 172 aa13.19□□□□□ -0.3
EPB41L3-204ENST00000540638 KIR2DL5AQ8N109 375 aa13.19□□□□□ -0.3
EPB41L3-204ENST00000540638 GFRA4Q9GZZ7 299 aa13.19□□□□□ -0.3
EPB41L3-204ENST00000540638 PPP1R14DQ9NXH3 145 aa13.19□□□□□ -0.3
EPB41L3-204ENST00000540638 UQCR10Q9UDW1 63 aa13.19□□□□□ -0.3
EPB41L3-204ENST00000540638 VPS13CQ709C8 3753 aa13.19□□□□□ -0.3
EPB41L3-204ENST00000540638 AVPP01185 164 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 TM4SF20Q53R12 229 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 OR4X2Q8NGF9 303 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 AGPAT4-IT1Q9H0P7 198 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 FOXE3Q13461 319 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 HIST2H2BDQ6DRA6 164 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 RNF223E7ERA6 249 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 HAX1O00165 279 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 COX6B1P14854 86 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 HTN1P15515 57 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 GATA1P15976 413 aaPredicted RBP13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 ORMDL3Q8N138 153 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 TMEM191AQ9H0A3 160 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 CUBNO60494 3623 aa13.18□□□□□ -0.3
EPB41L3-204ENST00000540638 IGHV4-59P01825 116 aa13.17□□□□□ -0.3
EPB41L3-204ENST00000540638 IGLL1P15814 213 aa13.17□□□□□ -0.3
EPB41L3-204ENST00000540638 LOXL1Q08397 574 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms