RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 UMAD1C9J7I0 102 aa5.07□□□□□ -1.6
LPCAT3-209ENST00000540060 BOLA2-SMG1P6H3BVE0 249 aa5.07□□□□□ -1.6
LPCAT3-209ENST00000540060 M0R2Z0 102 aa5.07□□□□□ -1.6
LPCAT3-209ENST00000540060 FHITP49789 147 aa5.07□□□□□ -1.6
LPCAT3-209ENST00000540060 NKX2-5P52952 324 aaPredicted RBP5.07□□□□□ -1.6
LPCAT3-209ENST00000540060 FXYD7P58549 80 aa5.07□□□□□ -1.6
LPCAT3-209ENST00000540060 RANP62826 216 aaKnown RBP5.07□□□□□ -1.6
LPCAT3-209ENST00000540060 SPINK13Q1W4C9 94 aa5.07□□□□□ -1.6
LPCAT3-209ENST00000540060 SLC51BQ86UW2 128 aa5.07□□□□□ -1.6
LPCAT3-209ENST00000540060 OR10J6PQ8NGY7 276 aa5.07□□□□□ -1.6
LPCAT3-209ENST00000540060 MAP1LC3BQ9GZQ8 125 aa5.07□□□□□ -1.6
LPCAT3-209ENST00000540060 X6R8D5 127 aa5.07□□□□□ -1.6
LPCAT3-209ENST00000540060 IGKV2-40A0A087WW87 121 aaPredicted RBP5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 GGTLC3B5MD39 225 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 CRXO43186 299 aaPredicted RBP5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 IGKV2D-40P01614 121 aaPredicted RBP5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 AMBPP02760 352 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 FGF8P55075 233 aaPredicted RBP5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 DPPA3Q6W0C5 159 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 ZNF705AQ6ZN79 300 aaPredicted RBP5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 C9orf47Q6ZRZ4 202 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 Q8NAQ8 132 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 OR11H2Q8NH07 326 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 FAM213BQ8TBF2 198 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 WWC2-AS2Q96NR7 200 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 ODF3Q96PU9 254 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 RARRES2Q99969 163 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 C11orf68Q9H3H3 251 aaKnown RBP5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 TMPRSS5Q9H3S3 457 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 OTORQ9NRC9 128 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 TMEM167BQ9NRX6 74 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 STARD9Q9P2P6 4700 aa5.06□□□□□ -1.6
LPCAT3-209ENST00000540060 TRAV12-2A0A075B6T6 113 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 A0A0J9YWU9 116 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 RBAKDNA6NC62 111 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 DIRC3C9JPN6 131 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 INSP01308 110 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 SLC25A5P05141 298 aaKnown RBP5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 RBMY1A1P0DJD3 496 aaKnown RBP5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 RBMY1CP0DJD4 496 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 CT45A10P0DMU9 189 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 MIFP14174 115 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 CDKN1BP46527 198 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 CSN1S1P47710 185 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 SULT1A2P50226 295 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 GNG5P63218 68 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 ERCC8Q13216 396 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 RBMY1FQ15415 496 aaKnown RBP5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 FAM74A1Q5RGS3 127 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 EIF5AL1Q6IS14 154 aaKnown RBP5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 IQCF2Q8IXL9 164 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 C1orf158Q8N1D5 194 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 ARL6IP6Q8N6S5 226 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 C5orf17Q8NAS9 161 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 RXFP4Q8TDU9 374 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 MBD3L1Q8WWY6 194 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 FAM19A4Q96LR4 140 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 IGF2BP2-AS1Q96M15 143 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 VGLL1Q99990 258 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 AGPAT4-IT1Q9H0P7 198 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 YTHDF2Q9Y5A9 579 aaKnown RBP5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 TENM2Q9NT68 2774 aa5.05□□□□□ -1.6
LPCAT3-209ENST00000540060 IGHV4-28A0A0C4DH34 117 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 A0A1W2PRE2 83 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 PGPA6NDG6 321 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 FAM74A7A6NL05 159 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 CRISP2P16562 243 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 TSPOP30536 169 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 LEPP41159 167 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 RAB5CP51148 216 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 UBE2G2P60604 165 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 KIR3DS1Q14943 382 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 TMEM78Q5T7P6 136 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 GFI1BQ5VTD9 330 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 Q8TAT8 98 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 CMTM2Q8TAZ6 248 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 LINC00477Q96M19 166 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 NEU1Q99519 415 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 PPP1R14DQ9NXH3 145 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 ZNF492Q9P255 531 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 RPH3ALQ9UNE2 315 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 ARL2-SNX15V9GYD0 113 aa5.04□□□□□ -1.6
LPCAT3-209ENST00000540060 IGHV3OR16-12A0A075B7B8 117 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 TRBV7-9A0A0J9YWB2 115 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 A0A1B0GV50 99 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 SERTM2A0A1B0GWG4 89 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 KLLNB2CW77 178 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 DEFB4AO15263 64 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 TCRAP04437 139 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 H2AFB1P0C5Y9 115 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 ZNF138P52744 262 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 SUMO1P63165 101 aaKnown RBP5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 PRR9Q5T870 116 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 ALKAL2Q6UX46 152 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 GOLT1AQ6ZVE7 132 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 TMEM256Q8N2U0 113 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 ZFAND2AQ8N6M9 145 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 SFT2D1Q8WV19 159 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 C20orf144Q9BQM9 153 aa5.03□□□□□ -1.6
LPCAT3-209ENST00000540060 GOLT1BQ9Y3E0 138 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms