RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 TDHQ8IZJ6 230 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 SLC25A45Q8N413 288 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 FGFBP3Q8TAT2 258 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 UPK3BQ9BT76 320 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 TTTY13Q9BZ97 58 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 ZNF71Q9NQZ8 489 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-211ENST00000539921 TPSG1Q9NRR2 321 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 PCNTO95613 3336 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 HCFC1P51610 2035 aa4.79□□□□□ -1.64
SNHG1-211ENST00000539921 LRP4O75096 1905 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 IGLV2-18A0A075B6J9 118 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 IGHV1-45A0A0A0MS14 117 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 A0A0J9YY99 117 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 ZNF815PA8K554 130 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 CDX4O14627 284 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-211ENST00000539921 SPINT2O43291 252 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 PYYP10082 97 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 ZNF32P17041 273 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 ATP5EP56381 51 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-211ENST00000539921 NPC2P61916 151 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 FOXF2Q12947 444 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 LAGE3Q14657 143 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 ZNF672Q499Z4 452 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-211ENST00000539921 ORMDL2Q53FV1 153 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 FAM222AQ5U5X8 452 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 C2orf82Q6UX34 121 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 SCGB1D4Q6XE38 83 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 ZCCHC24Q8N2G6 241 aaKnown RBP4.78□□□□□ -1.64
SNHG1-211ENST00000539921 SRSF12Q8WXF0 261 aaKnown RBP4.78□□□□□ -1.64
SNHG1-211ENST00000539921 CCDC140Q96MF4 163 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 S1PR3Q99500 378 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 C1orf43Q9BWL3 253 aa4.78□□□□□ -1.64
SNHG1-211ENST00000539921 FGF23Q9GZV9 251 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-211ENST00000539921 TIMM8BQ9Y5J9 83 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-211ENST00000539921 SMIM26A0A096LP01 95 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 IGHV1-69DA0A0B4J2H0 117 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 TEX49A0A1B0GTD5 131 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 HSPB6O14558 160 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 WNT9BO14905 357 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 NGFP01138 241 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 RNASE2P10153 161 aaKnown RBP4.77□□□□□ -1.65
SNHG1-211ENST00000539921 WT1P19544 449 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-211ENST00000539921 CD24P25063 80 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 PRDX2P32119 198 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 PDE6HQ13956 83 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 IL11RAQ14626 422 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 C4orf26Q17RF5 130 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 FAM201AQ5SY85 155 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 C1orf195Q5TG92 126 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 PVRIGQ6DKI7 326 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 CXCL17Q6UXB2 119 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 IL17RELQ6ZVW7 336 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 MDP1Q86V88 176 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 TMEM263Q8WUH6 116 aaKnown RBP4.77□□□□□ -1.65
SNHG1-211ENST00000539921 FOXB1Q99853 325 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 FAM173AQ9BQD7 235 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 Q9H3A6 140 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 GOLGA4Q13439 2230 aaKnown RBP4.77□□□□□ -1.65
SNHG1-211ENST00000539921 SPAG17Q6Q759 2223 aa4.77□□□□□ -1.65
SNHG1-211ENST00000539921 TMSB15BA0A087X1C1 80 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 TRGV5A0A0B4J1U4 118 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 SDHAF1A6NFY7 115 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 LINC01548A6NM66 108 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 FCGR3BO75015 233 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 INAFM2P0DMQ5 153 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 LOXP28300 417 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-211ENST00000539921 SPINK9Q5DT21 86 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 PATE2Q6UY27 113 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 Q6ZT83 130 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 LINC00336Q6ZUF6 198 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 PLXDC1Q8IUK5 500 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 NEXN-AS1Q8NBZ9 246 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 LINC00477Q96M19 166 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 DEC1Q9P2X7 70 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 CCL26Q9Y258 94 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 TANC2Q9HCD6 1990 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 AGRNO00468 2067 aa4.76□□□□□ -1.65
SNHG1-211ENST00000539921 A0A0J9YW62 118 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 LOC389332A0A1B0GUA5 103 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 LILRA5A6NI73 299 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 C11orf86A6NJI1 115 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 LST1O00453 97 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 CCL16O15467 120 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 PPP1R17O96001 155 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 IGHV3-13P01766 116 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 RPL35AP18077 110 aaKnown RBP4.75□□□□□ -1.65
SNHG1-211ENST00000539921 ERHP84090 104 aaKnown RBP4.75□□□□□ -1.65
SNHG1-211ENST00000539921 MZT1Q08AG7 82 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 ATP5EP2Q5VTU8 51 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 Q6JHZ5 121 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 LYZL1Q6UWQ5 148 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 LINC00305Q7Z4B0 112 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 UBALD1Q8TB05 177 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 TOMM6Q96B49 74 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 RNF185Q96GF1 192 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 VSIG2Q96IQ7 327 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 FAM19A4Q96LR4 140 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 PRR25Q96S07 402 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 DPH3P1Q9H4G8 78 aa4.75□□□□□ -1.65
SNHG1-211ENST00000539921 FSCN3Q9NQT6 498 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms