RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 C12orf45Q8N5I9 185 aaPredicted RBP8.64□□□□□ -1.03
VAMP1-206ENST00000538970 TMEM252Q8N6L7 170 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 ZNF680Q8NEM1 530 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 C18orf15Q96N68 181 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 LINC00467Q9BRT7 94 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 DNAH5Q8TE73 4624 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 UBR4Q5T4S7 5183 aa8.63□□□□□ -1.03
VAMP1-206ENST00000538970 PYYP10082 97 aa8.63□□□□□ -1.03
VAMP1-206ENST00000538970 HIST1H1EP10412 219 aaKnown RBP8.63□□□□□ -1.03
VAMP1-206ENST00000538970 FGF7P21781 194 aa8.63□□□□□ -1.03
VAMP1-206ENST00000538970 HBG1P69891 147 aa8.63□□□□□ -1.03
VAMP1-206ENST00000538970 HBG2P69892 147 aa8.63□□□□□ -1.03
VAMP1-206ENST00000538970 CD300CQ08708 224 aa8.63□□□□□ -1.03
VAMP1-206ENST00000538970 BTN1A1Q13410 526 aa8.63□□□□□ -1.03
VAMP1-206ENST00000538970 RAB32Q13637 225 aa8.63□□□□□ -1.03
VAMP1-206ENST00000538970 PDE6HQ13956 83 aa8.63□□□□□ -1.03
VAMP1-206ENST00000538970 VSIG2Q96IQ7 327 aa8.63□□□□□ -1.03
VAMP1-206ENST00000538970 GSN-AS1Q9NRJ2 163 aa8.63□□□□□ -1.03
VAMP1-206ENST00000538970 PRELID1Q9Y255 219 aa8.63□□□□□ -1.03
VAMP1-206ENST00000538970 TRGV2A0A075B6R0 118 aa8.62□□□□□ -1.03
VAMP1-206ENST00000538970 A0A096LPF7 62 aa8.62□□□□□ -1.03
VAMP1-206ENST00000538970 ZNF324O75467 553 aaPredicted RBP8.62□□□□□ -1.03
VAMP1-206ENST00000538970 BTF3P20290 206 aaKnown RBP8.62□□□□□ -1.03
VAMP1-206ENST00000538970 ANXA2RQ3ZCQ2 193 aa8.62□□□□□ -1.03
VAMP1-206ENST00000538970 GCSAMLQ5JQS6 135 aa8.62□□□□□ -1.03
VAMP1-206ENST00000538970 EXOC3-AS1Q8N2X6 119 aa8.62□□□□□ -1.03
VAMP1-206ENST00000538970 EIF4E3Q8N5X7 224 aaKnown RBP8.62□□□□□ -1.03
VAMP1-206ENST00000538970 LINC00477Q96M19 166 aa8.62□□□□□ -1.03
VAMP1-206ENST00000538970 NPCDR1Q9BY65 106 aa8.62□□□□□ -1.03
VAMP1-206ENST00000538970 AGPAT4-IT1Q9H0P7 198 aa8.62□□□□□ -1.03
VAMP1-206ENST00000538970 SCRT2Q9NQ03 307 aa8.62□□□□□ -1.03
VAMP1-206ENST00000538970 TIMM9Q9Y5J7 89 aa8.62□□□□□ -1.03
VAMP1-206ENST00000538970 TRGV1A0A0A0MS02 117 aa8.61□□□□□ -1.03
VAMP1-206ENST00000538970 SPINK4O60575 86 aa8.61□□□□□ -1.03
VAMP1-206ENST00000538970 MPDU1O75352 247 aa8.61□□□□□ -1.03
VAMP1-206ENST00000538970 H2AFB2P0C5Z0 115 aa8.61□□□□□ -1.03
VAMP1-206ENST00000538970 CRISP2P16562 243 aa8.61□□□□□ -1.03
VAMP1-206ENST00000538970 TCL1AP56279 114 aa8.61□□□□□ -1.03
VAMP1-206ENST00000538970 KRTAP10-2P60368 255 aa8.61□□□□□ -1.03
VAMP1-206ENST00000538970 ATP6V1FQ16864 119 aa8.61□□□□□ -1.03
VAMP1-206ENST00000538970 BLNKQ8WV28 456 aa8.61□□□□□ -1.03
VAMP1-206ENST00000538970 SLC25A2Q9BXI2 301 aa8.61□□□□□ -1.03
VAMP1-206ENST00000538970 GPN1Q9HCN4 374 aaPredicted RBP8.61□□□□□ -1.03
VAMP1-206ENST00000538970 FUT9Q9Y231 359 aa8.61□□□□□ -1.03
VAMP1-206ENST00000538970 IGKV2-40A0A087WW87 121 aaPredicted RBP8.6□□□□□ -1.03
VAMP1-206ENST00000538970 IGKV2D-40P01614 121 aaPredicted RBP8.6□□□□□ -1.03
VAMP1-206ENST00000538970 RNASE4P34096 147 aaKnown RBP8.6□□□□□ -1.03
VAMP1-206ENST00000538970 IBA57Q5T440 356 aaKnown RBP8.6□□□□□ -1.03
VAMP1-206ENST00000538970 PRR9Q5T870 116 aa8.6□□□□□ -1.03
VAMP1-206ENST00000538970 C9orf47Q6ZRZ4 202 aa8.6□□□□□ -1.03
VAMP1-206ENST00000538970 ZFAND2AQ8N6M9 145 aa8.6□□□□□ -1.03
VAMP1-206ENST00000538970 FAM167A-AS1Q96KT0 104 aa8.6□□□□□ -1.03
VAMP1-206ENST00000538970 CCDC32Q9BV29 185 aa8.6□□□□□ -1.03
VAMP1-206ENST00000538970 AAMDCQ9H7C9 122 aa8.6□□□□□ -1.03
VAMP1-206ENST00000538970 KLF12Q9Y4X4 402 aa8.6□□□□□ -1.03
VAMP1-206ENST00000538970 GPX1P07203 203 aa8.59□□□□□ -1.03
VAMP1-206ENST00000538970 NMBP08949 121 aa8.59□□□□□ -1.03
VAMP1-206ENST00000538970 LINC00315P59091 139 aa8.59□□□□□ -1.03
VAMP1-206ENST00000538970 ICAM4Q14773 271 aa8.59□□□□□ -1.03
VAMP1-206ENST00000538970 TMEM78Q5T7P6 136 aa8.59□□□□□ -1.03
VAMP1-206ENST00000538970 FAM122CQ6P4D5 195 aa8.59□□□□□ -1.03
VAMP1-206ENST00000538970 MIR17HGQ75NE6 70 aa8.59□□□□□ -1.03
VAMP1-206ENST00000538970 THAP6Q8TBB0 222 aa8.59□□□□□ -1.03
VAMP1-206ENST00000538970 VGLL1Q99990 258 aa8.59□□□□□ -1.03
VAMP1-206ENST00000538970 TP53TG3Q9ULZ0 132 aa8.59□□□□□ -1.03
VAMP1-206ENST00000538970 FAM240BA0A1B0GVZ2 78 aa8.58□□□□□ -1.04
VAMP1-206ENST00000538970 RGS13O14921 159 aa8.58□□□□□ -1.04
VAMP1-206ENST00000538970 NHLH2Q02577 135 aa8.58□□□□□ -1.04
VAMP1-206ENST00000538970 Q6ZQT7 251 aa8.58□□□□□ -1.04
VAMP1-206ENST00000538970 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
VAMP1-206ENST00000538970 OR5C1Q8NGR4 320 aa8.58□□□□□ -1.04
VAMP1-206ENST00000538970 ST6GAL2Q96JF0 529 aa8.58□□□□□ -1.04
VAMP1-206ENST00000538970 MRPL16Q9NX20 251 aaKnown RBP8.58□□□□□ -1.04
VAMP1-206ENST00000538970 ZNF492Q9P255 531 aa8.58□□□□□ -1.04
VAMP1-206ENST00000538970 DMBT1Q9UGM3 2413 aaPredicted RBP8.57□□□□□ -1.04
VAMP1-206ENST00000538970 IGHV1OR15-1A0A075B7D0 117 aa8.57□□□□□ -1.04
VAMP1-206ENST00000538970 SIVA1O15304 175 aa8.57□□□□□ -1.04
VAMP1-206ENST00000538970 NBEAP1P0C6P0 100 aa8.57□□□□□ -1.04
VAMP1-206ENST00000538970 Q8TAT8 98 aa8.57□□□□□ -1.04
VAMP1-206ENST00000538970 FXYD5Q96DB9 178 aa8.57□□□□□ -1.04
VAMP1-206ENST00000538970 PHYHIPLQ96FC7 376 aa8.57□□□□□ -1.04
VAMP1-206ENST00000538970 NDUFA13Q9P0J0 144 aa8.57□□□□□ -1.04
VAMP1-206ENST00000538970 ICOSQ9Y6W8 199 aa8.57□□□□□ -1.04
VAMP1-206ENST00000538970 TRBV7-9A0A0J9YWB2 115 aa8.56□□□□□ -1.04
VAMP1-206ENST00000538970 PAX4O43316 350 aa8.56□□□□□ -1.04
VAMP1-206ENST00000538970 NXPH4O95158 308 aa8.56□□□□□ -1.04
VAMP1-206ENST00000538970 IGHV3-53P01767 116 aa8.56□□□□□ -1.04
VAMP1-206ENST00000538970 OR10J4P0C629 311 aa8.56□□□□□ -1.04
VAMP1-206ENST00000538970 ZNF138P52744 262 aa8.56□□□□□ -1.04
VAMP1-206ENST00000538970 ARPC5LQ9BPX5 153 aa8.56□□□□□ -1.04
VAMP1-206ENST00000538970 MRPL32Q9BYC8 188 aaKnown RBP8.56□□□□□ -1.04
VAMP1-206ENST00000538970 OR51M1Q9H341 326 aa8.56□□□□□ -1.04
VAMP1-206ENST00000538970 KCNIP2Q9NS61 270 aa8.56□□□□□ -1.04
VAMP1-206ENST00000538970 PRO0255Q9UI72 69 aa8.56□□□□□ -1.04
VAMP1-206ENST00000538970 E5RGE8 158 aa8.55□□□□□ -1.04
VAMP1-206ENST00000538970 SIX6O95475 246 aa8.55□□□□□ -1.04
VAMP1-206ENST00000538970 CRYBA4P53673 196 aa8.55□□□□□ -1.04
VAMP1-206ENST00000538970 ZNF415Q09FC8 603 aa8.55□□□□□ -1.04
VAMP1-206ENST00000538970 ASAH1Q13510 395 aa8.55□□□□□ -1.04
VAMP1-206ENST00000538970 MZT2BQ6NZ67 158 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms