RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 ZNF137PP52743 207 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 RPL15P61313 204 aaKnown RBP6.88□□□□□ -1.31
GGA3-202ENST00000538886 B5MCH6 92 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 IGKV1-39P01597 117 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 IGKV1D-39P04432 117 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 IL4P05112 153 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 HTN1P15515 57 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 RCHY1Q96PM5 261 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 TMEM191AQ9H0A3 160 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 LY6LH3BQJ8 138 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 H3BTX0 84 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 CCL24O00175 119 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 IGKV3-20P01619 116 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 IGLC1P0CG04 106 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 SLURP1P55000 103 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 RPS20P60866 119 aaKnown RBP6.88□□□□□ -1.31
GGA3-202ENST00000538886 C18orf65Q6ZTR6 163 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 PIFOQ8TCI5 191 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 NPVFQ9HCQ7 196 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 VPS13CQ709C8 3753 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 A0A1W2PS18 150 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 J3KRW8 73 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 HOXD3P31249 432 aaPredicted RBP6.87□□□□□ -1.31
GGA3-202ENST00000538886 FCGR2BP31994 310 aaPredicted RBP6.87□□□□□ -1.31
GGA3-202ENST00000538886 ATP5G3P48201 142 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 WT1-ASQ06250 92 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 TMEM86BQ8N661 226 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 DEFB125Q8N687 156 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 MRAP2Q96G30 205 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 RAB40CQ96S21 281 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 ANAPC13Q9BS18 74 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 CGB1A6NKQ9 187 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 COX7A2P2O60397 106 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 CTRLP40313 264 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 ANXA2RQ3ZCQ2 193 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 C8orf31Q8N9H6 132 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 LINC00574Q9H8X3 128 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 IGLV2-14P01704 120 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 IGHG2P01859 326 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 MTURNQ8N3F0 131 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 ZNF702PQ9H963 129 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 ST20Q9HBF5 79 aa6.87□□□□□ -1.31
GGA3-202ENST00000538886 CTXND1A0A1B0GTU2 59 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 APCSP02743 223 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 ZNF726P1Q15940 193 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 TMEM147Q9BVK8 224 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 TMEM160Q9NX00 188 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 SLC25A6P12236 298 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 PRCDQ00LT1 54 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 TIGITQ495A1 244 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 FA2HQ7L5A8 372 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 TMEM116Q8NCL8 245 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 ZNF479Q96JC4 524 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 TMEM70Q9BUB7 260 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 TRAV1-1A0A0B4J248 108 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 FRMD6-AS1P0C7T7 363 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 SERF2P84101 59 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 TP53TG3Q9ULZ0 132 aa6.86□□□□□ -1.31
GGA3-202ENST00000538886 TMEM50AO95807 157 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 LINC00869P0C866 280 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 CD300EQ496F6 205 aaPredicted RBP6.85□□□□□ -1.31
GGA3-202ENST00000538886 NPPCP23582 126 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 ODF1Q14990 250 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 RPP25LQ8N5L8 163 aaKnown RBP6.85□□□□□ -1.31
GGA3-202ENST00000538886 HSPB8Q9UJY1 196 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 F11RQ9Y624 299 aaKnown RBP6.85□□□□□ -1.31
GGA3-202ENST00000538886 IGHV3OR16-12A0A075B7B8 117 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 CSN3P07498 182 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 ELANEP08246 267 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 ADAMTSL5Q6ZMM2 481 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 ZNF114Q8NC26 417 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 MBD3L1Q8WWY6 194 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 CACNG8Q8WXS5 425 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 METTL26Q96S19 204 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 ZNF257Q9Y2Q1 563 aa6.85□□□□□ -1.31
GGA3-202ENST00000538886 TRBV12-3P01733 135 aa6.84□□□□□ -1.31
GGA3-202ENST00000538886 FCER1GP30273 86 aa6.84□□□□□ -1.31
GGA3-202ENST00000538886 BRWD1-AS2P59051 145 aa6.84□□□□□ -1.31
GGA3-202ENST00000538886 TMEM97Q5BJF2 176 aa6.84□□□□□ -1.31
GGA3-202ENST00000538886 DDB2Q92466 427 aa6.84□□□□□ -1.31
GGA3-202ENST00000538886 GRAMD2BQ96HH9 432 aa6.84□□□□□ -1.31
GGA3-202ENST00000538886 CHEK1O14757 476 aa6.84□□□□□ -1.31
GGA3-202ENST00000538886 IGLV2-23P01705 113 aa6.84□□□□□ -1.31
GGA3-202ENST00000538886 SPINK8P0C7L1 97 aa6.84□□□□□ -1.31
GGA3-202ENST00000538886 SCGB1A1P11684 91 aa6.84□□□□□ -1.31
GGA3-202ENST00000538886 NPBQ8NG41 125 aa6.84□□□□□ -1.31
GGA3-202ENST00000538886 TSKUQ8WUA8 353 aa6.84□□□□□ -1.31
GGA3-202ENST00000538886 LINC01619G3V211 115 aa6.84□□□□□ -1.32
GGA3-202ENST00000538886 OVOL1O14753 267 aa6.84□□□□□ -1.32
GGA3-202ENST00000538886 AMY1AP04745 511 aa6.84□□□□□ -1.32
GGA3-202ENST00000538886 GCSHP23434 173 aa6.84□□□□□ -1.32
GGA3-202ENST00000538886 ETDBQ3ZM63 59 aa6.84□□□□□ -1.32
GGA3-202ENST00000538886 IL36BQ9NZH7 164 aa6.84□□□□□ -1.32
GGA3-202ENST00000538886 MRPL27Q9P0M9 148 aaKnown RBP6.84□□□□□ -1.32
GGA3-202ENST00000538886 CUBNO60494 3623 aa6.83□□□□□ -1.32
GGA3-202ENST00000538886 HELTA6NFD8 242 aa6.83□□□□□ -1.32
GGA3-202ENST00000538886 LEPROTL1O95214 131 aa6.83□□□□□ -1.32
GGA3-202ENST00000538886 MFAP2P55001 183 aa6.83□□□□□ -1.32
GGA3-202ENST00000538886 FOXA3P55318 350 aaPredicted RBP6.83□□□□□ -1.32
GGA3-202ENST00000538886 HIST1H1AQ02539 215 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms