RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 KLK5Q9Y337 293 aaPredicted RBP9.76□□□□□ -0.85
CD9-208ENST00000538834 IGHV3OR16-12A0A075B7B8 117 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 ZNF705GA8MUZ8 300 aaPredicted RBP9.75□□□□□ -0.85
CD9-208ENST00000538834 EIF3GO75821 320 aaKnown RBP eCLIP9.75□□□□□ -0.85
CD9-208ENST00000538834 JTBO76095 146 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 MBP02144 154 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 SPART-AS1P0CW21 52 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 UBE2L3P68036 154 aaKnown RBP9.75□□□□□ -0.85
CD9-208ENST00000538834 ERCC8Q13216 396 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 ZNF726P1Q15940 193 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 ZFAND2AQ8N6M9 145 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 RNASE8Q8TDE3 154 aaKnown RBP9.75□□□□□ -0.85
CD9-208ENST00000538834 LINC00476Q8WZB0 136 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 RAB24Q969Q5 203 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 ST6GAL2Q96JF0 529 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 VGLL1Q99990 258 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 APLNQ9ULZ1 77 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 YTHDF2Q9Y5A9 579 aaKnown RBP9.75□□□□□ -0.85
CD9-208ENST00000538834 NACAE9PAV3 2078 aa9.75□□□□□ -0.85
CD9-208ENST00000538834 TRAV10A0A0B4J240 114 aa9.74□□□□□ -0.85
CD9-208ENST00000538834 TEX48A0A1B0GUV7 120 aa9.74□□□□□ -0.85
CD9-208ENST00000538834 A0A1W2PPV4 95 aa9.74□□□□□ -0.85
CD9-208ENST00000538834 H7BYZ3 331 aa9.74□□□□□ -0.85
CD9-208ENST00000538834 ARPC5O15511 151 aa9.74□□□□□ -0.85
CD9-208ENST00000538834 LEPP41159 167 aa9.74□□□□□ -0.85
CD9-208ENST00000538834 CDC34P49427 236 aaPredicted RBP9.74□□□□□ -0.85
CD9-208ENST00000538834 RANP62826 216 aaKnown RBP9.74□□□□□ -0.85
CD9-208ENST00000538834 FAM222AQ5U5X8 452 aa9.74□□□□□ -0.85
CD9-208ENST00000538834 FAM122CQ6P4D5 195 aa9.74□□□□□ -0.85
CD9-208ENST00000538834 SSX7Q7RTT5 188 aa9.74□□□□□ -0.85
CD9-208ENST00000538834 LINC00612Q8N6U2 182 aa9.74□□□□□ -0.85
CD9-208ENST00000538834 TMED6Q8WW62 240 aa9.74□□□□□ -0.85
CD9-208ENST00000538834 OTORQ9NRC9 128 aa9.74□□□□□ -0.85
CD9-208ENST00000538834 IGKV2-40A0A087WW87 121 aaPredicted RBP9.73□□□□□ -0.85
CD9-208ENST00000538834 BORCS7-ASMTA0A0B4J1R7 106 aa9.73□□□□□ -0.85
CD9-208ENST00000538834 DIRC3C9JPN6 131 aa9.73□□□□□ -0.85
CD9-208ENST00000538834 IGKV2D-40P01614 121 aaPredicted RBP9.73□□□□□ -0.85
CD9-208ENST00000538834 ARL14EPLP0DKL9 152 aa9.73□□□□□ -0.85
CD9-208ENST00000538834 ZNF493Q6ZR52 646 aa9.73□□□□□ -0.85
CD9-208ENST00000538834 C2CD4CQ8TF44 421 aa9.73□□□□□ -0.85
CD9-208ENST00000538834 PLA2G2EQ9NZK7 142 aa9.73□□□□□ -0.85
CD9-208ENST00000538834 LENEPQ9Y5L5 61 aa9.73□□□□□ -0.85
CD9-208ENST00000538834 LYRM9A8MSI8 78 aa9.72□□□□□ -0.85
CD9-208ENST00000538834 GCHFRP30047 84 aa9.72□□□□□ -0.85
CD9-208ENST00000538834 CD300CQ08708 224 aa9.72□□□□□ -0.85
CD9-208ENST00000538834 PRR9Q5T870 116 aa9.72□□□□□ -0.85
CD9-208ENST00000538834 LGALS9CQ6DKI2 356 aa9.72□□□□□ -0.85
CD9-208ENST00000538834 RXFP4Q8TDU9 374 aa9.72□□□□□ -0.85
CD9-208ENST00000538834 TMEM263Q8WUH6 116 aaKnown RBP9.72□□□□□ -0.85
CD9-208ENST00000538834 LINC01587Q99440 93 aa9.72□□□□□ -0.85
CD9-208ENST00000538834 NIPSNAP3BQ9BS92 247 aa9.72□□□□□ -0.85
CD9-208ENST00000538834 C7orf71A4D174 169 aa9.71□□□□□ -0.86
CD9-208ENST00000538834 PGPA6NDG6 321 aa9.71□□□□□ -0.86
CD9-208ENST00000538834 HMGB3O15347 200 aaKnown RBP9.71□□□□□ -0.86
CD9-208ENST00000538834 ZNF138P52744 262 aa9.71□□□□□ -0.86
CD9-208ENST00000538834 ZNF767PQ75MW2 155 aa9.71□□□□□ -0.86
CD9-208ENST00000538834 C16orf74Q96GX8 76 aa9.71□□□□□ -0.86
CD9-208ENST00000538834 PYGO2Q9BRQ0 406 aa9.71□□□□□ -0.86
CD9-208ENST00000538834 TMEM208Q9BTX3 173 aa9.71□□□□□ -0.86
CD9-208ENST00000538834 DEFB131BA0A096LNP1 70 aa9.7□□□□□ -0.86
CD9-208ENST00000538834 TRAV12-3A0A0B4J271 114 aa9.7□□□□□ -0.86
CD9-208ENST00000538834 A0A0D9SG52 128 aa9.7□□□□□ -0.86
CD9-208ENST00000538834 ANXA2RQ3ZCQ2 193 aa9.7□□□□□ -0.86
CD9-208ENST00000538834 TMEM78Q5T7P6 136 aa9.7□□□□□ -0.86
CD9-208ENST00000538834 TCTE3Q8IZS6 198 aa9.7□□□□□ -0.86
CD9-208ENST00000538834 C11orf72Q8NBR9 251 aa9.7□□□□□ -0.86
CD9-208ENST00000538834 FAM210BQ96KR6 192 aa9.7□□□□□ -0.86
CD9-208ENST00000538834 ARPC5LQ9BPX5 153 aa9.7□□□□□ -0.86
CD9-208ENST00000538834 ACTR3CQ9C0K3 210 aaPredicted RBP9.7□□□□□ -0.86
CD9-208ENST00000538834 CTXND1A0A1B0GTU2 59 aa9.69□□□□□ -0.86
CD9-208ENST00000538834 CXorf1O96002 111 aa9.69□□□□□ -0.86
CD9-208ENST00000538834 SEC11BP0C7V7 166 aa9.69□□□□□ -0.86
CD9-208ENST00000538834 EMP1P54849 157 aa9.69□□□□□ -0.86
CD9-208ENST00000538834 BTN1A1Q13410 526 aa9.69□□□□□ -0.86
CD9-208ENST00000538834 Q6AWC8 147 aa9.69□□□□□ -0.86
CD9-208ENST00000538834 Q6ZQT7 251 aa9.69□□□□□ -0.86
CD9-208ENST00000538834 TVP23CQ96ET8 276 aa9.69□□□□□ -0.86
CD9-208ENST00000538834 TMEM167BQ9NRX6 74 aa9.69□□□□□ -0.86
CD9-208ENST00000538834 DNAH10Q8IVF4 4471 aa9.69□□□□□ -0.86
CD9-208ENST00000538834 IGHV4-4A0A075B6R2 117 aa9.68□□□□□ -0.86
CD9-208ENST00000538834 A0A1W2PRE2 83 aa9.68□□□□□ -0.86
CD9-208ENST00000538834 GGTLC3B5MD39 225 aa9.68□□□□□ -0.86
CD9-208ENST00000538834 IGLV2-11P01706 119 aa9.68□□□□□ -0.86
CD9-208ENST00000538834 CSN1S1P47710 185 aa9.68□□□□□ -0.86
CD9-208ENST00000538834 DAZ2Q13117 558 aaKnown RBP9.68□□□□□ -0.86
CD9-208ENST00000538834 TP53TG3Q9ULZ0 132 aa9.68□□□□□ -0.86
CD9-208ENST00000538834 TIMM8BQ9Y5J9 83 aaPredicted RBP9.68□□□□□ -0.86
CD9-208ENST00000538834 FRAS1Q86XX4 4008 aa9.67□□□□□ -0.86
CD9-208ENST00000538834 IGLL5B9A064 214 aa9.67□□□□□ -0.86
CD9-208ENST00000538834 BCL2L11O43521 198 aa9.67□□□□□ -0.86
CD9-208ENST00000538834 C5orf17Q8NAS9 161 aa9.67□□□□□ -0.86
CD9-208ENST00000538834 Q8TAT8 98 aa9.67□□□□□ -0.86
CD9-208ENST00000538834 C18orf15Q96N68 181 aa9.67□□□□□ -0.86
CD9-208ENST00000538834 SERTM2A0A1B0GWG4 89 aa9.66□□□□□ -0.86
CD9-208ENST00000538834 CBY3A6NI87 242 aa9.66□□□□□ -0.86
CD9-208ENST00000538834 TCRAP04437 139 aa9.66□□□□□ -0.86
CD9-208ENST00000538834 GPX1P07203 203 aa9.66□□□□□ -0.86
CD9-208ENST00000538834 RNASE4P34096 147 aaKnown RBP9.66□□□□□ -0.86
CD9-208ENST00000538834 TDRG1Q3Y452 100 aa9.66□□□□□ -0.86
CD9-208ENST00000538834 LGALSLQ3ZCW2 172 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms