RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 MORN5Q5VZ52 161 aa9.53□□□□□ -0.88
SMARCA4-206ENST00000538456 NFE4Q86UQ8 179 aa9.53□□□□□ -0.88
SMARCA4-206ENST00000538456 ZBTB8BQ8NAP8 495 aaPredicted RBP9.53□□□□□ -0.88
SMARCA4-206ENST00000538456 RNF24Q9Y225 148 aa9.53□□□□□ -0.88
SMARCA4-206ENST00000538456 FAM229AH3BQW9 127 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 J3QL48 77 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 CCSO14618 274 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 SIX6O95475 246 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 IGHV3-53P01767 116 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 GCSHP23434 173 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 TEPPQ6URK8 271 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 Q6ZSN1 163 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 BPIFA4PQ86YQ2 179 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 C11orf72Q8NBR9 251 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 ZNF680Q8NEM1 530 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 OR2T35Q8NGX2 323 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 NPVFQ9HCQ7 196 aa9.52□□□□□ -0.89
SMARCA4-206ENST00000538456 NPIPB6E9PJ23 425 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 G3V3Q6 166 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 H3BQ15 152 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 K7EPK0 472 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 COX7A2P2O60397 106 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 CYCSP99999 105 aaKnown RBP9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 ID3Q02535 119 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 OPCMLQ14982 345 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 ZNF546Q86UE3 836 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 HYLS1Q96M11 299 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 ODF3Q96PU9 254 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 NMES1Q9C002 83 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 KLF12Q9Y4X4 402 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 PXMP4Q9Y6I8 212 aa9.51□□□□□ -0.89
SMARCA4-206ENST00000538456 C7orf71A4D174 169 aa9.5□□□□□ -0.89
SMARCA4-206ENST00000538456 C5orf51A6NDU8 294 aa9.5□□□□□ -0.89
SMARCA4-206ENST00000538456 AGPAT2O15120 278 aa9.5□□□□□ -0.89
SMARCA4-206ENST00000538456 ZNF324O75467 553 aaPredicted RBP9.5□□□□□ -0.89
SMARCA4-206ENST00000538456 IGLC2P0DOY2 106 aa9.5□□□□□ -0.89
SMARCA4-206ENST00000538456 PXDC1Q5TGL8 231 aa9.5□□□□□ -0.89
SMARCA4-206ENST00000538456 LYPD5Q6UWN5 251 aa9.5□□□□□ -0.89
SMARCA4-206ENST00000538456 OR10P1Q8NGE3 313 aa9.5□□□□□ -0.89
SMARCA4-206ENST00000538456 C2orf50Q96LR7 162 aa9.5□□□□□ -0.89
SMARCA4-206ENST00000538456 MSRB1Q9NZV6 116 aa9.5□□□□□ -0.89
SMARCA4-206ENST00000538456 LY96Q9Y6Y9 160 aa9.5□□□□□ -0.89
SMARCA4-206ENST00000538456 TRAV9-2A0A087WT02 112 aa9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 FAM25EA8MYX2 175 aa9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 SMLR1H3BR10 107 aa9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 SCGB1D2O95969 90 aa9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 SLC25A5P05141 298 aaKnown RBP9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 ERCC8Q13216 396 aa9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 BTN1A1Q13410 526 aa9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 C10orf113Q5VZT2 155 aa9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 TMEM14EPQ6UXP3 125 aa9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 TMEM37Q8WXS4 190 aa9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 SAT2Q96F10 170 aaPredicted RBP9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 SMIM8Q96KF7 97 aa9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 C8orf49Q96NF6 230 aa9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 LINC00467Q9BRT7 94 aa9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 MRPL16Q9NX20 251 aaKnown RBP9.49□□□□□ -0.89
SMARCA4-206ENST00000538456 FNDC10F2Z333 226 aa9.48□□□□□ -0.89
SMARCA4-206ENST00000538456 SPINK4O60575 86 aa9.48□□□□□ -0.89
SMARCA4-206ENST00000538456 RNASE4P34096 147 aaKnown RBP9.48□□□□□ -0.89
SMARCA4-206ENST00000538456 IAH1Q2TAA2 248 aaPredicted RBP9.48□□□□□ -0.89
SMARCA4-206ENST00000538456 WFDC10BQ8IUB3 73 aa9.48□□□□□ -0.89
SMARCA4-206ENST00000538456 EIF4E3Q8N5X7 224 aaKnown RBP9.48□□□□□ -0.89
SMARCA4-206ENST00000538456 PPP1R1CQ8WVI7 109 aa9.48□□□□□ -0.89
SMARCA4-206ENST00000538456 MGST2Q99735 147 aa9.48□□□□□ -0.89
SMARCA4-206ENST00000538456 PRO0255Q9UI72 69 aa9.48□□□□□ -0.89
SMARCA4-206ENST00000538456 TRAV5A0A0B4J249 113 aa9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 M0R3E3 92 aa9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 NKX2-5P52952 324 aaPredicted RBP9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 CRYBA4P53673 196 aa9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 TCL1AP56279 114 aa9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 ARL16Q0P5N6 197 aa9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 IL15RAQ13261 267 aa9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 MRPL23Q16540 153 aaKnown RBP9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 Q5BKY6 102 aa9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 NEGR1Q7Z3B1 354 aa9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 OR11H4Q8NGC9 324 aa9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 TP53TG3Q9ULZ0 132 aa9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 HHLA3Q9XRX5 114 aa9.47□□□□□ -0.89
SMARCA4-206ENST00000538456 IGLV5-52A0A0A0MRZ9 124 aa9.46□□□□□ -0.9
SMARCA4-206ENST00000538456 HMSDA8MTL9 139 aa9.46□□□□□ -0.9
SMARCA4-206ENST00000538456 KLLNB2CW77 178 aa9.46□□□□□ -0.9
SMARCA4-206ENST00000538456 E5RGE8 158 aa9.46□□□□□ -0.9
SMARCA4-206ENST00000538456 MPC2O95563 127 aa9.46□□□□□ -0.9
SMARCA4-206ENST00000538456 EVI2AP22794 236 aa9.46□□□□□ -0.9
SMARCA4-206ENST00000538456 GUK1Q16774 197 aa9.46□□□□□ -0.9
SMARCA4-206ENST00000538456 ANXA2RQ3ZCQ2 193 aa9.46□□□□□ -0.9
SMARCA4-206ENST00000538456 RGS13O14921 159 aa9.45□□□□□ -0.9
SMARCA4-206ENST00000538456 MPDU1O75352 247 aa9.45□□□□□ -0.9
SMARCA4-206ENST00000538456 PET100P0DJ07 73 aa9.45□□□□□ -0.9
SMARCA4-206ENST00000538456 FHL2Q14192 279 aa9.45□□□□□ -0.9
SMARCA4-206ENST00000538456 C9orf62Q8N4C0 152 aa9.45□□□□□ -0.9
SMARCA4-206ENST00000538456 VGLL1Q99990 258 aa9.45□□□□□ -0.9
SMARCA4-206ENST00000538456 RCL1Q9Y2P8 373 aaKnown RBP9.45□□□□□ -0.9
SMARCA4-206ENST00000538456 PSCAO43653 123 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 TSC22D2O75157 780 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 GPX1P07203 203 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 SRIP30626 198 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 SLAQ13239 276 aa9.44□□□□□ -0.9
SMARCA4-206ENST00000538456 RAB32Q13637 225 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms