RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 BLCAPP62952 87 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 C8orf86Q6ZUL3 223 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 GLMPQ8WWB7 406 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 C2orf88Q9BSF0 95 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 CLEC5AQ9NY25 188 aa8.76□□□□□ -1.01
SLC28A1-204ENST00000538177 A0A096LNT2 108 aa8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 NDUFA4O00483 81 aa8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 IGLC6P0CF74 106 aa8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 BTF3P20290 206 aaKnown RBP8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 AGPAT4-IT1Q9H0P7 198 aa8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 IGHV1-24A0A0C4DH33 117 aa8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 TRBV12-3P01733 135 aa8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 PMCHL1Q16048 86 aa8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 FAM104BQ5XKR9 115 aa8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 Q6ZS46 218 aa8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 LINC01356Q8N9X3 169 aa8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 FER1L6-AS1Q8NA97 138 aa8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 BBC3Q96PG8 261 aaPredicted RBP8.75□□□□□ -1.01
SLC28A1-204ENST00000538177 TMEM213A2RRL7 107 aa8.74□□□□□ -1.01
SLC28A1-204ENST00000538177 IGLV1-40P01703 118 aa8.74□□□□□ -1.01
SLC28A1-204ENST00000538177 OR5AL1P0C617 328 aa8.74□□□□□ -1.01
SLC28A1-204ENST00000538177 LINC01559Q495D7 138 aa8.74□□□□□ -1.01
SLC28A1-204ENST00000538177 UNQ9165/PRO28630Q6UXU0 137 aa8.74□□□□□ -1.01
SLC28A1-204ENST00000538177 KLK15Q9H2R5 256 aa8.74□□□□□ -1.01
SLC28A1-204ENST00000538177 PPP1R14DQ9NXH3 145 aa8.74□□□□□ -1.01
SLC28A1-204ENST00000538177 ZNF580Q9UK33 172 aa8.74□□□□□ -1.01
SLC28A1-204ENST00000538177 U3KQK5 164 aa8.74□□□□□ -1.01
SLC28A1-204ENST00000538177 MYO18BQ8IUG5 2567 aa8.74□□□□□ -1.01
SLC28A1-204ENST00000538177 USP24Q9UPU5 2620 aa8.74□□□□□ -1.01
SLC28A1-204ENST00000538177 COX6B1P14854 86 aa8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 ZNF138P52744 262 aa8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 C9orf47Q6ZRZ4 202 aa8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 IL17RELQ6ZVW7 336 aa8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 CRXO43186 299 aaPredicted RBP8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 ORM1P02763 201 aa8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 PF4V1P10720 104 aa8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 CFHR3Q02985 330 aa8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 SRSF1Q07955 248 aaKnown RBP eCLIP8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 SPATA45Q537H7 98 aa8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 MRPL52Q86TS9 123 aaKnown RBP8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 TMEM70Q9BUB7 260 aa8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 SNHG12Q9BXW3 62 aa8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 CNFNQ9BYD5 112 aa8.73□□□□□ -1.01
SLC28A1-204ENST00000538177 A0A0G2JLM5 398 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 J3QLI3 93 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 EREGO14944 169 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 SMAD7O15105 426 aaKnown RBP8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 HIST1H1AQ02539 215 aaPredicted RBP8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 TMEM78Q5T7P6 136 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 ZNF705AQ6ZN79 300 aaPredicted RBP8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 C9orf139Q6ZV77 190 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 ZNF843Q8N446 348 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 CSPG4Q6UVK1 2322 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 M0R143 59 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 LEPROTL1O95214 131 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 IGHV3-11P01762 117 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 AMN1Q8IY45 258 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 OR4X2Q8NGF9 303 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 C16orf92Q96LL3 132 aa8.72□□□□□ -1.01
SLC28A1-204ENST00000538177 VPS13CQ709C8 3753 aa8.71□□□□□ -1.01
SLC28A1-204ENST00000538177 D6R8Y8 96 aa8.71□□□□□ -1.01
SLC28A1-204ENST00000538177 CSN3P07498 182 aa8.71□□□□□ -1.01
SLC28A1-204ENST00000538177 LINC00173Q6ZV60 143 aa8.71□□□□□ -1.01
SLC28A1-204ENST00000538177 GPHB5Q86YW7 130 aa8.71□□□□□ -1.01
SLC28A1-204ENST00000538177 ZFYVE26Q68DK2 2539 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 ZNF462Q96JM2 2506 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 MUC21A0A0G2JKD1 596 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 MUC21A0A140T8X8 626 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 SYS1-DBNDD2H3BUS1 97 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 TWIST1Q15672 202 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 DEFB112Q30KQ8 113 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 MRPL51Q4U2R6 128 aaKnown RBP8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 MUC21Q5SSG8 566 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 SPATA12Q7Z6I5 190 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 NPFFR1Q9GZQ6 430 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 TMEM191AQ9H0A3 160 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 AP5S1Q9NUS5 200 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 LENEPQ9Y5L5 61 aa8.71□□□□□ -1.02
SLC28A1-204ENST00000538177 TRAV9-2A0A087WT02 112 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 IGKV3D-20A0A0C4DH25 116 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 A0A1B0GV90 55 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 C20orf202A1L168 122 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 SOCS3O14543 225 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 IGLC3P0DOY3 106 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 SSTP61278 116 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 ORMDL3Q8N138 153 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 KLHDC1Q8N7A1 406 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 PRSS3P2Q8NHM4 247 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 C20orf173Q96LM9 149 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 PRELID3AQ96N28 172 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 C11orf21Q9P2W6 132 aa8.7□□□□□ -1.02
SLC28A1-204ENST00000538177 FAM208BQ5VWN6 2430 aa8.69□□□□□ -1.02
SLC28A1-204ENST00000538177 IGHV4-59P01825 116 aa8.69□□□□□ -1.02
SLC28A1-204ENST00000538177 LOXL1Q08397 574 aaPredicted RBP8.69□□□□□ -1.02
SLC28A1-204ENST00000538177 LCNL1Q6ZST4 164 aa8.69□□□□□ -1.02
SLC28A1-204ENST00000538177 FA2HQ7L5A8 372 aa8.69□□□□□ -1.02
SLC28A1-204ENST00000538177 ATOH7Q8N100 152 aa8.69□□□□□ -1.02
SLC28A1-204ENST00000538177 UQCR10Q9UDW1 63 aa8.69□□□□□ -1.02
SLC28A1-204ENST00000538177 HSPB8Q9UJY1 196 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms