RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 RAB4AP20338 218 aa12□□□□□ -0.49
MKS1-204ENST00000537529 DEFB112Q30KQ8 113 aa12□□□□□ -0.49
MKS1-204ENST00000537529 TMEM78Q5T7P6 136 aa12□□□□□ -0.49
MKS1-204ENST00000537529 Q6ZS46 218 aa12□□□□□ -0.49
MKS1-204ENST00000537529 OR4X2Q8NGF9 303 aa12□□□□□ -0.49
MKS1-204ENST00000537529 C16orf92Q96LL3 132 aa12□□□□□ -0.49
MKS1-204ENST00000537529 KLK15Q9H2R5 256 aa12□□□□□ -0.49
MKS1-204ENST00000537529 TGFAP01135 160 aa11.99□□□□□ -0.49
MKS1-204ENST00000537529 ZNF138P52744 262 aa11.99□□□□□ -0.49
MKS1-204ENST00000537529 CFHR3Q02985 330 aa11.99□□□□□ -0.49
MKS1-204ENST00000537529 LOXL1Q08397 574 aaPredicted RBP11.99□□□□□ -0.49
MKS1-204ENST00000537529 UNQ9165/PRO28630Q6UXU0 137 aa11.99□□□□□ -0.49
MKS1-204ENST00000537529 IL17RELQ6ZVW7 336 aa11.99□□□□□ -0.49
MKS1-204ENST00000537529 M0QZ24 198 aa11.99□□□□□ -0.49
MKS1-204ENST00000537529 IGHV4-59P01825 116 aa11.99□□□□□ -0.49
MKS1-204ENST00000537529 ORM1P02763 201 aa11.99□□□□□ -0.49
MKS1-204ENST00000537529 LINC00614P0C842 121 aa11.99□□□□□ -0.49
MKS1-204ENST00000537529 NPFFR1Q9GZQ6 430 aa11.99□□□□□ -0.49
MKS1-204ENST00000537529 AGPAT4-IT1Q9H0P7 198 aa11.99□□□□□ -0.49
MKS1-204ENST00000537529 PAM16Q9Y3D7 125 aa11.99□□□□□ -0.49
MKS1-204ENST00000537529 USP9XQ93008 2570 aaPredicted RBP11.98□□□□□ -0.49
MKS1-204ENST00000537529 SPTAN1Q13813 2472 aaKnown RBP11.98□□□□□ -0.49
MKS1-204ENST00000537529 IGLC6P0CF74 106 aa11.98□□□□□ -0.49
MKS1-204ENST00000537529 TDRG1Q3Y452 100 aa11.98□□□□□ -0.49
MKS1-204ENST00000537529 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
MKS1-204ENST00000537529 TMEM213A2RRL7 107 aa11.98□□□□□ -0.49
MKS1-204ENST00000537529 SMAD7O15105 426 aaKnown RBP11.98□□□□□ -0.49
MKS1-204ENST00000537529 BTF3P20290 206 aaKnown RBP11.98□□□□□ -0.49
MKS1-204ENST00000537529 HIST1H1AQ02539 215 aaPredicted RBP11.98□□□□□ -0.49
MKS1-204ENST00000537529 C9orf47Q6ZRZ4 202 aa11.98□□□□□ -0.49
MKS1-204ENST00000537529 BEX4Q9NWD9 120 aaPredicted RBP11.98□□□□□ -0.49
MKS1-204ENST00000537529 CACNA1BQ00975 2339 aa11.98□□□□□ -0.49
MKS1-204ENST00000537529 IGHV1-24A0A0C4DH33 117 aa11.97□□□□□ -0.49
MKS1-204ENST00000537529 USP24Q9UPU5 2620 aa11.96□□□□□ -0.49
MKS1-204ENST00000537529 RNF223E7ERA6 249 aa11.96□□□□□ -0.49
MKS1-204ENST00000537529 FAM104BQ5XKR9 115 aa11.96□□□□□ -0.49
MKS1-204ENST00000537529 EBLN2Q6P2I7 272 aa11.96□□□□□ -0.49
MKS1-204ENST00000537529 ZNF738Q8NE65 137 aa11.96□□□□□ -0.49
MKS1-204ENST00000537529 PPP1R14DQ9NXH3 145 aa11.96□□□□□ -0.49
MKS1-204ENST00000537529 OR5AL1P0C617 328 aa11.96□□□□□ -0.5
MKS1-204ENST00000537529 PMCHL1Q16048 86 aa11.96□□□□□ -0.5
MKS1-204ENST00000537529 LCNL1Q6ZST4 164 aa11.96□□□□□ -0.5
MKS1-204ENST00000537529 MAPK1IP1LQ8NDC0 245 aa11.96□□□□□ -0.5
MKS1-204ENST00000537529 U3KQK5 164 aa11.96□□□□□ -0.5
MKS1-204ENST00000537529 ASH1LQ9NR48 2969 aaKnown RBP11.96□□□□□ -0.5
MKS1-204ENST00000537529 C2orf70A6NJV1 201 aa11.95□□□□□ -0.5
MKS1-204ENST00000537529 TWIST1Q15672 202 aa11.95□□□□□ -0.5
MKS1-204ENST00000537529 MIEN1Q9BRT3 115 aa11.95□□□□□ -0.5
MKS1-204ENST00000537529 CSN3P07498 182 aa11.95□□□□□ -0.5
MKS1-204ENST00000537529 IGHV4-31P0DP07 118 aa11.95□□□□□ -0.5
MKS1-204ENST00000537529 SSTP61278 116 aa11.95□□□□□ -0.5
MKS1-204ENST00000537529 LBHQ53QV2 105 aaPredicted RBP11.95□□□□□ -0.5
MKS1-204ENST00000537529 PEF1Q9UBV8 284 aaKnown RBP11.95□□□□□ -0.5
MKS1-204ENST00000537529 LENEPQ9Y5L5 61 aa11.95□□□□□ -0.5
MKS1-204ENST00000537529 MUC21A0A0G2JKD1 596 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 IGHV7-4-1A0A0J9YVY3 117 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 MUC21A0A140T8X8 626 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 TMEM89A2RUT3 159 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 LEPROTL1O95214 131 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 DEFB113Q30KQ7 82 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 TMEM95Q3KNT9 176 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 MUC21Q5SSG8 566 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 FA2HQ7L5A8 372 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 AMN1Q8IY45 258 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 ORMDL3Q8N138 153 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 LRRC75A-AS1Q8N1F1 130 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 C20orf173Q96LM9 149 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 TMEM70Q9BUB7 260 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 CNFNQ9BYD5 112 aa11.94□□□□□ -0.5
MKS1-204ENST00000537529 DAZ1Q9NQZ3 744 aaKnown RBP11.94□□□□□ -0.5
MKS1-204ENST00000537529 FLNCQ14315 2725 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 D6R8Y8 96 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 SOCS3O14543 225 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 OVOL1O14753 267 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 FSHBP01225 129 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 SPATA45Q537H7 98 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 ZNF575Q86XF7 245 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 GPHB5Q86YW7 130 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 PRELID3AQ96N28 172 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 PSMG3-AS1Q96PY0 264 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 PSMB8P28062 276 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 KRTAP10-9P60411 292 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 OR10J6PQ8NGY7 276 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 PRSS3P2Q8NHM4 247 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 AP5S1Q9NUS5 200 aa11.93□□□□□ -0.5
MKS1-204ENST00000537529 COL12A1Q99715 3063 aa11.92□□□□□ -0.5
MKS1-204ENST00000537529 FAM106AQ4KMX7 169 aa11.92□□□□□ -0.5
MKS1-204ENST00000537529 MRPL51Q4U2R6 128 aaKnown RBP11.92□□□□□ -0.5
MKS1-204ENST00000537529 Q5PR19 223 aa11.92□□□□□ -0.5
MKS1-204ENST00000537529 ZNF705AQ6ZN79 300 aaPredicted RBP11.92□□□□□ -0.5
MKS1-204ENST00000537529 LINC00477Q96M19 166 aa11.92□□□□□ -0.5
MKS1-204ENST00000537529 C2orf88Q9BSF0 95 aa11.92□□□□□ -0.5
MKS1-204ENST00000537529 RHPN1-AS1Q9BWJ2 59 aa11.92□□□□□ -0.5
MKS1-204ENST00000537529 TMEM191AQ9H0A3 160 aa11.92□□□□□ -0.5
MKS1-204ENST00000537529 HSPB8Q9UJY1 196 aa11.92□□□□□ -0.5
MKS1-204ENST00000537529 VPREB3Q9UKI3 123 aa11.92□□□□□ -0.5
MKS1-204ENST00000537529 C20orf202A1L168 122 aa11.91□□□□□ -0.5
MKS1-204ENST00000537529 K7EMT4 169 aa11.91□□□□□ -0.5
MKS1-204ENST00000537529 RPL11P62913 178 aaKnown RBP11.91□□□□□ -0.5
MKS1-204ENST00000537529 LURAP1LQ8IV03 231 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms