RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 INSP01308 110 aa12.85□□□□□ -0.35
DDX55-204ENST00000536079 GNG5P63218 68 aa12.85□□□□□ -0.35
DDX55-204ENST00000536079 GFI1BQ5VTD9 330 aa12.85□□□□□ -0.35
DDX55-204ENST00000536079 Q8TAT8 98 aa12.85□□□□□ -0.35
DDX55-204ENST00000536079 SEC11BP0C7V7 166 aa12.84□□□□□ -0.35
DDX55-204ENST00000536079 AZU1P20160 251 aa12.84□□□□□ -0.35
DDX55-204ENST00000536079 PMS2P11Q13670 270 aa12.84□□□□□ -0.35
DDX55-204ENST00000536079 PRR9Q5T870 116 aa12.84□□□□□ -0.35
DDX55-204ENST00000536079 Q6ZQT7 251 aa12.84□□□□□ -0.35
DDX55-204ENST00000536079 C9orf62Q8N4C0 152 aa12.84□□□□□ -0.35
DDX55-204ENST00000536079 STOML3Q8TAV4 291 aa12.84□□□□□ -0.35
DDX55-204ENST00000536079 TMED6Q8WW62 240 aa12.84□□□□□ -0.35
DDX55-204ENST00000536079 ODF3Q96PU9 254 aa12.84□□□□□ -0.35
DDX55-204ENST00000536079 IQCF2Q8IXL9 164 aa12.83□□□□□ -0.36
DDX55-204ENST00000536079 LINC00477Q96M19 166 aa12.83□□□□□ -0.36
DDX55-204ENST00000536079 ZNF492Q9P255 531 aa12.83□□□□□ -0.36
DDX55-204ENST00000536079 RPH3ALQ9UNE2 315 aa12.83□□□□□ -0.36
DDX55-204ENST00000536079 YTHDF2Q9Y5A9 579 aaKnown RBP12.83□□□□□ -0.36
DDX55-204ENST00000536079 PLECQ15149 4684 aaKnown RBP12.82□□□□□ -0.36
DDX55-204ENST00000536079 MAP1LC3B2A6NCE7 125 aa12.82□□□□□ -0.36
DDX55-204ENST00000536079 GGTLC3B5MD39 225 aa12.82□□□□□ -0.36
DDX55-204ENST00000536079 LEPP41159 167 aa12.82□□□□□ -0.36
DDX55-204ENST00000536079 CSN1S1P47710 185 aa12.82□□□□□ -0.36
DDX55-204ENST00000536079 EMP1P54849 157 aa12.82□□□□□ -0.36
DDX55-204ENST00000536079 ZNF767PQ75MW2 155 aa12.82□□□□□ -0.36
DDX55-204ENST00000536079 ZFAND2AQ8N6M9 145 aa12.82□□□□□ -0.36
DDX55-204ENST00000536079 C11orf45Q8TAV5 145 aa12.82□□□□□ -0.36
DDX55-204ENST00000536079 TMEM208Q9BTX3 173 aa12.82□□□□□ -0.36
DDX55-204ENST00000536079 MAP1LC3BQ9GZQ8 125 aa12.82□□□□□ -0.36
DDX55-204ENST00000536079 LOC102723971A0A1B0GUV8 181 aa12.81□□□□□ -0.36
DDX55-204ENST00000536079 SMIM9A6NGZ8 99 aa12.81□□□□□ -0.36
DDX55-204ENST00000536079 KLLNB2CW77 178 aa12.81□□□□□ -0.36
DDX55-204ENST00000536079 HBE1P02100 147 aa12.81□□□□□ -0.36
DDX55-204ENST00000536079 TPT1P13693 172 aaKnown RBP12.81□□□□□ -0.36
DDX55-204ENST00000536079 TSPOP30536 169 aa12.81□□□□□ -0.36
DDX55-204ENST00000536079 NKX2-5P52952 324 aaPredicted RBP12.81□□□□□ -0.36
DDX55-204ENST00000536079 UBE2G2P60604 165 aa12.81□□□□□ -0.36
DDX55-204ENST00000536079 BTN1A1Q13410 526 aa12.81□□□□□ -0.36
DDX55-204ENST00000536079 GOLT1AQ6ZVE7 132 aa12.81□□□□□ -0.36
DDX55-204ENST00000536079 FAM213BQ8TBF2 198 aa12.81□□□□□ -0.36
DDX55-204ENST00000536079 LINC01587Q99440 93 aa12.81□□□□□ -0.36
DDX55-204ENST00000536079 TMEM167BQ9NRX6 74 aa12.81□□□□□ -0.36
DDX55-204ENST00000536079 TRAV8-1A0A0A6YYK1 113 aa12.8□□□□□ -0.36
DDX55-204ENST00000536079 TRAV12-3A0A0B4J271 114 aa12.8□□□□□ -0.36
DDX55-204ENST00000536079 PLAC8L1A1L4L8 177 aa12.8□□□□□ -0.36
DDX55-204ENST00000536079 RBAKDNA6NC62 111 aa12.8□□□□□ -0.36
DDX55-204ENST00000536079 SLC25A5P05141 298 aaKnown RBP12.8□□□□□ -0.36
DDX55-204ENST00000536079 CRISP2P16562 243 aa12.8□□□□□ -0.36
DDX55-204ENST00000536079 ZNF138P52744 262 aa12.8□□□□□ -0.36
DDX55-204ENST00000536079 SUMO1P63165 101 aaKnown RBP12.8□□□□□ -0.36
DDX55-204ENST00000536079 RRN3P1Q2M238 152 aa12.8□□□□□ -0.36
DDX55-204ENST00000536079 TMEM78Q5T7P6 136 aa12.8□□□□□ -0.36
DDX55-204ENST00000536079 RXFP4Q8TDU9 374 aa12.8□□□□□ -0.36
DDX55-204ENST00000536079 SGK494Q96LW2 274 aa12.8□□□□□ -0.36
DDX55-204ENST00000536079 A0A1B0GV50 99 aa12.79□□□□□ -0.36
DDX55-204ENST00000536079 CXorf65A6NEN9 183 aa12.79□□□□□ -0.36
DDX55-204ENST00000536079 RNASE4P34096 147 aaKnown RBP12.79□□□□□ -0.36
DDX55-204ENST00000536079 C12orf74Q32Q52 190 aa12.79□□□□□ -0.36
DDX55-204ENST00000536079 ZFP69Q49AA0 526 aa12.79□□□□□ -0.36
DDX55-204ENST00000536079 CMTM2Q8TAZ6 248 aa12.79□□□□□ -0.36
DDX55-204ENST00000536079 TVP23CQ96ET8 276 aa12.79□□□□□ -0.36
DDX55-204ENST00000536079 C7orf71A4D174 169 aa12.78□□□□□ -0.36
DDX55-204ENST00000536079 UMAD1C9J7I0 102 aa12.78□□□□□ -0.36
DDX55-204ENST00000536079 ZNF324O75467 553 aaPredicted RBP12.78□□□□□ -0.36
DDX55-204ENST00000536079 HTN1P15515 57 aa12.78□□□□□ -0.36
DDX55-204ENST00000536079 EIF5AP63241 154 aaKnown RBP12.78□□□□□ -0.36
DDX55-204ENST00000536079 MBD3L1Q8WWY6 194 aa12.78□□□□□ -0.36
DDX55-204ENST00000536079 A0A1W2PRE2 83 aa12.77□□□□□ -0.37
DDX55-204ENST00000536079 FAM74A7A6NL05 159 aa12.77□□□□□ -0.37
DDX55-204ENST00000536079 TCRAP04437 139 aa12.77□□□□□ -0.37
DDX55-204ENST00000536079 TAS2R60P59551 318 aa12.77□□□□□ -0.37
DDX55-204ENST00000536079 FAM74A1Q5RGS3 127 aa12.77□□□□□ -0.37
DDX55-204ENST00000536079 Q6ZTC4 211 aa12.77□□□□□ -0.37
DDX55-204ENST00000536079 TMEM256Q8N2U0 113 aa12.77□□□□□ -0.37
DDX55-204ENST00000536079 SFT2D1Q8WV19 159 aa12.77□□□□□ -0.37
DDX55-204ENST00000536079 PHLDA1Q8WV24 401 aaPredicted RBP12.77□□□□□ -0.37
DDX55-204ENST00000536079 DKK2Q9UBU2 259 aa12.77□□□□□ -0.37
DDX55-204ENST00000536079 BOLA1Q9Y3E2 137 aa12.77□□□□□ -0.37
DDX55-204ENST00000536079 TENM2Q9NT68 2774 aa12.76□□□□□ -0.37
DDX55-204ENST00000536079 IGLV2-11P01706 119 aa12.76□□□□□ -0.37
DDX55-204ENST00000536079 FAM222AQ5U5X8 452 aa12.76□□□□□ -0.37
DDX55-204ENST00000536079 CEMP1Q6PRD7 247 aaPredicted RBP12.76□□□□□ -0.37
DDX55-204ENST00000536079 SLC51BQ86UW2 128 aa12.76□□□□□ -0.37
DDX55-204ENST00000536079 ARL6IP6Q8N6S5 226 aa12.76□□□□□ -0.37
DDX55-204ENST00000536079 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
DDX55-204ENST00000536079 LINC00479Q96M42 142 aa12.76□□□□□ -0.37
DDX55-204ENST00000536079 C20orf144Q9BQM9 153 aa12.76□□□□□ -0.37
DDX55-204ENST00000536079 EPDR1Q9UM22 224 aa12.76□□□□□ -0.37
DDX55-204ENST00000536079 SACSQ9NZJ4 4579 aa12.75□□□□□ -0.37
DDX55-204ENST00000536079 H7BYZ3 331 aa12.75□□□□□ -0.37
DDX55-204ENST00000536079 GPX1P07203 203 aa12.75□□□□□ -0.37
DDX55-204ENST00000536079 CCL20P78556 96 aa12.75□□□□□ -0.37
DDX55-204ENST00000536079 DPPA3Q6W0C5 159 aa12.75□□□□□ -0.37
DDX55-204ENST00000536079 RNASE8Q8TDE3 154 aaKnown RBP12.75□□□□□ -0.37
DDX55-204ENST00000536079 RYR3Q15413 4870 aa12.74□□□□□ -0.37
DDX55-204ENST00000536079 TMEM189A5PLL7 270 aa12.74□□□□□ -0.37
DDX55-204ENST00000536079 NMBP08949 121 aa12.74□□□□□ -0.37
DDX55-204ENST00000536079 TP53TG3Q9ULZ0 132 aa12.74□□□□□ -0.37
DDX55-204ENST00000536079 RYR2Q92736 4967 aa12.74□□□□□ -0.37
DDX55-204ENST00000536079 LYSTQ99698 3801 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms