RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 CD14P08571 375 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 SLC25A4P12235 298 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 CNBPP62633 177 aaKnown RBP1.28□□□□□ -2.2
VBP1-203ENST00000535916 ASB16-AS1Q495Z4 193 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 TEN1Q86WV5 123 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 COA5Q86WW8 74 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 CTAGE3PQ8IX95 158 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 OR10AC1Q8NH08 325 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 PATE1Q8WXA2 126 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 Q96M85 177 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 NABP2Q9BQ15 211 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 METTL1Q9UBP6 276 aaKnown RBP1.28□□□□□ -2.2
VBP1-203ENST00000535916 DNAJC15Q9Y5T4 150 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 RGS12O14924 1447 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 HEATR5AQ86XA9 2040 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 ICE1Q9Y2F5 2266 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 NCKAP5O14513 1909 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 ADGRB1O14514 1584 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 TRAV14DV4A0A0A6YYC5 116 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 FAM236AA0A1B0GUQ0 79 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 FAM236BA0A1B0GV22 79 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 A0A1B0GV90 55 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 LINC00587B1AMM8 73 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 ZNF670-ZNF695F2Z2N8 137 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 NPFFO15130 113 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 SMIM24O75264 130 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 CD3DP04234 171 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 GPX1P07203 203 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 CXCL8P10145 99 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 HIST1H1BP16401 226 aaKnown RBP1.27□□□□□ -2.21
VBP1-203ENST00000535916 LSM3P62310 102 aaKnown RBP1.27□□□□□ -2.21
VBP1-203ENST00000535916 BLCAPP62952 87 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 DEFB103AP81534 67 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 C2orf82Q6UX34 121 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 CLECL1Q8IZS7 167 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 Q8N2B8 174 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 MMGT1Q8N4V1 131 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 TP53RKQ96S44 253 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 COMMD3Q9UBI1 195 aa1.27□□□□□ -2.21
VBP1-203ENST00000535916 LAMB4A4D0S4 1761 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 PTPRGP23470 1445 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 TMEM2Q9UHN6 1383 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 TRBV6-5A0A0K0K1A5 114 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 CD2P06729 351 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 RRAS2P62070 204 aaPredicted RBP1.26□□□□□ -2.21
VBP1-203ENST00000535916 CIRBPQ14011 172 aaKnown RBP1.26□□□□□ -2.21
VBP1-203ENST00000535916 FOXI2Q6ZQN5 318 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 ZCCHC23Q6ZST2 131 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 RPS19BP1Q86WX3 136 aaKnown RBP1.26□□□□□ -2.21
VBP1-203ENST00000535916 OR5AK2Q8NH90 309 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 OTOSQ8NHW6 89 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 LINC00470Q9BZP3 86 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 CST11Q9H112 138 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 SLC35B3Q9H1N7 401 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 MGAMO43451 1857 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 LAMB2P55268 1798 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 NALCNQ8IZF0 1738 aa1.26□□□□□ -2.21
VBP1-203ENST00000535916 CECR2Q9BXF3 1484 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 FGD6Q6ZV73 1430 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 SCN8AQ9UQD0 1980 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 TRBV6-8A0A0A6YYG3 113 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 PNMA8CA0A1B0GUJ8 204 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 ZNF736B4DX44 427 aaPredicted RBP1.25□□□□□ -2.21
VBP1-203ENST00000535916 J3QR89 54 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 K7ERU9 68 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 DLEU1O43261 78 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 TPST1O60507 370 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 ETV6P41212 452 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 SELENOWP63302 87 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 PCOTHQ58A44 107 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 KRTAP5-10Q6L8G5 202 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 GLIPR1L1Q6UWM5 242 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 ARL11Q969Q4 196 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 CGREF1Q99674 301 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 C2orf88Q9BSF0 95 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 LSM2Q9Y333 95 aaKnown RBP1.25□□□□□ -2.21
VBP1-203ENST00000535916 MPC1Q9Y5U8 109 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.25□□□□□ -2.21
VBP1-203ENST00000535916 BAHCC1Q9P281 2608 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 ADGRB2O60241 1585 aa1.25□□□□□ -2.21
VBP1-203ENST00000535916 MBD5Q9P267 1494 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 HYPMO75409 117 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 PCBD1P61457 104 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 COPZ1P61923 177 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 PLGLB1Q02325 96 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 EMX2Q04743 252 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 MIR22HGQ0VDD5 57 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 LINC00052Q96N35 136 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 SDF2Q99470 211 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 MYH10P35580 1976 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 PLXNA4Q9HCM2 1894 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 FOCADQ5VW36 1801 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 KIAA1549LQ6ZVL6 1849 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 UHRF1BP1LA0JNW5 1464 aa1.24□□□□□ -2.21
VBP1-203ENST00000535916 ROCK2O75116 1388 aaKnown RBP1.23□□□□□ -2.21
VBP1-203ENST00000535916 RIMS1Q86UR5 1692 aaKnown RBP1.23□□□□□ -2.21
VBP1-203ENST00000535916 ANAPC1Q9H1A4 1944 aa1.23□□□□□ -2.21
VBP1-203ENST00000535916 EIF4G3O43432 1585 aaKnown RBP1.23□□□□□ -2.21
VBP1-203ENST00000535916 TRBV20-1A0A075B6N2 111 aa1.23□□□□□ -2.21
VBP1-203ENST00000535916 C3orf85A0A1B0GTC6 90 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms