RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 H3BQ15 152 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 M0R2Z0 102 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 OR7C2O60412 319 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 GCHFRP30047 84 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 CCL20P78556 96 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 C12orf74Q32Q52 190 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 BPIFA4PQ86YQ2 179 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 ZNF738Q8NE65 137 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 SUN5Q8TC36 379 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 FXYD5Q96DB9 178 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 OR51M1Q9H341 326 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 ZNF331Q9NQX6 463 aaPredicted RBP11.74□□□□□ -0.53
ATL3-202ENST00000535789 RNF24Q9Y225 148 aa11.74□□□□□ -0.53
ATL3-202ENST00000535789 KLK5Q9Y337 293 aaPredicted RBP11.74□□□□□ -0.53
ATL3-202ENST00000535789 PRM2P04554 102 aa11.73□□□□□ -0.53
ATL3-202ENST00000535789 OR10J4P0C629 311 aa11.73□□□□□ -0.53
ATL3-202ENST00000535789 PSG3Q16557 428 aa11.73□□□□□ -0.53
ATL3-202ENST00000535789 SPINK13Q1W4C9 94 aa11.73□□□□□ -0.53
ATL3-202ENST00000535789 PRAC2D3DTV9 90 aa11.72□□□□□ -0.53
ATL3-202ENST00000535789 TEX46H3BTG2 121 aa11.72□□□□□ -0.53
ATL3-202ENST00000535789 LY6G6CO95867 125 aa11.72□□□□□ -0.53
ATL3-202ENST00000535789 UBE2L3P68036 154 aaKnown RBP11.72□□□□□ -0.53
ATL3-202ENST00000535789 OR8A1Q8NGG7 326 aa11.72□□□□□ -0.53
ATL3-202ENST00000535789 DNAH2Q9P225 4427 aa11.71□□□□□ -0.53
ATL3-202ENST00000535789 HIST1H1EP10412 219 aaKnown RBP11.71□□□□□ -0.53
ATL3-202ENST00000535789 HIST1H1AQ02539 215 aaPredicted RBP11.71□□□□□ -0.53
ATL3-202ENST00000535789 IGF2BP2-AS1Q96M15 143 aa11.71□□□□□ -0.53
ATL3-202ENST00000535789 TMEM167BQ9NRX6 74 aa11.71□□□□□ -0.53
ATL3-202ENST00000535789 ZNF586Q9NXT0 402 aa11.71□□□□□ -0.53
ATL3-202ENST00000535789 APLNQ9ULZ1 77 aa11.71□□□□□ -0.53
ATL3-202ENST00000535789 TRAV12-2A0A075B6T6 113 aa11.7□□□□□ -0.54
ATL3-202ENST00000535789 DUSP14O95147 198 aaKnown RBP11.7□□□□□ -0.54
ATL3-202ENST00000535789 KIR3DS1Q14943 382 aa11.7□□□□□ -0.54
ATL3-202ENST00000535789 IQCF2Q8IXL9 164 aa11.7□□□□□ -0.54
ATL3-202ENST00000535789 C2CD4CQ8TF44 421 aa11.7□□□□□ -0.54
ATL3-202ENST00000535789 RPUSD4Q96CM3 377 aaKnown RBP11.7□□□□□ -0.54
ATL3-202ENST00000535789 SLC50A1Q9BRV3 221 aa11.7□□□□□ -0.54
ATL3-202ENST00000535789 LINC00862A6NCI5 91 aa11.69□□□□□ -0.54
ATL3-202ENST00000535789 SMIM9A6NGZ8 99 aa11.69□□□□□ -0.54
ATL3-202ENST00000535789 NBEAP1P0C6P0 100 aa11.69□□□□□ -0.54
ATL3-202ENST00000535789 MED9Q9NWA0 146 aa11.69□□□□□ -0.54
ATL3-202ENST00000535789 YTHDF2Q9Y5A9 579 aaKnown RBP11.69□□□□□ -0.54
ATL3-202ENST00000535789 NACAE9PAV3 2078 aa11.69□□□□□ -0.54
ATL3-202ENST00000535789 TRBV19A0A075B6N1 114 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 TRAV10A0A0B4J240 114 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 PLAC8L1A1L4L8 177 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 C11orf94C9JXX5 98 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 NDUFB4O95168 129 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 PPT1P50897 306 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 EMP1P54849 157 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 FAM210AQ96ND0 272 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 MANBALQ9NQG1 85 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 GNG13Q9P2W3 67 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 DKK2Q9UBU2 259 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 GOLT1BQ9Y3E0 138 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 ARL2-SNX15V9GYD0 113 aa11.68□□□□□ -0.54
ATL3-202ENST00000535789 LOC102723971A0A1B0GUV8 181 aa11.67□□□□□ -0.54
ATL3-202ENST00000535789 IGLL5B9A064 214 aa11.67□□□□□ -0.54
ATL3-202ENST00000535789 INSP01308 110 aa11.67□□□□□ -0.54
ATL3-202ENST00000535789 BCL2P10415 239 aa11.67□□□□□ -0.54
ATL3-202ENST00000535789 PDE6HQ13956 83 aa11.67□□□□□ -0.54
ATL3-202ENST00000535789 GUK1Q16774 197 aa11.67□□□□□ -0.54
ATL3-202ENST00000535789 FAM222AQ5U5X8 452 aa11.67□□□□□ -0.54
ATL3-202ENST00000535789 LGALS9CQ6DKI2 356 aa11.67□□□□□ -0.54
ATL3-202ENST00000535789 BLNKQ8WV28 456 aa11.67□□□□□ -0.54
ATL3-202ENST00000535789 IGHV4-4A0A075B6R2 117 aa11.66□□□□□ -0.54
ATL3-202ENST00000535789 FAM74A7A6NL05 159 aa11.66□□□□□ -0.54
ATL3-202ENST00000535789 ZNF705GA8MUZ8 300 aaPredicted RBP11.66□□□□□ -0.54
ATL3-202ENST00000535789 PAGE4O60829 102 aa11.66□□□□□ -0.54
ATL3-202ENST00000535789 IFNA1P01562 189 aa11.66□□□□□ -0.54
ATL3-202ENST00000535789 UBE2G2P60604 165 aa11.66□□□□□ -0.54
ATL3-202ENST00000535789 FAT2Q9NYQ8 4349 aa11.66□□□□□ -0.54
ATL3-202ENST00000535789 DEFB131BA0A096LNP1 70 aa11.65□□□□□ -0.54
ATL3-202ENST00000535789 A0A1W2PRE2 83 aa11.65□□□□□ -0.54
ATL3-202ENST00000535789 GGTLC3B5MD39 225 aa11.65□□□□□ -0.54
ATL3-202ENST00000535789 M0R3E3 92 aa11.65□□□□□ -0.54
ATL3-202ENST00000535789 ZNF253O75346 499 aa11.65□□□□□ -0.54
ATL3-202ENST00000535789 AMBPP02760 352 aa11.65□□□□□ -0.54
ATL3-202ENST00000535789 AZU1P20160 251 aa11.65□□□□□ -0.54
ATL3-202ENST00000535789 RRN3P1Q2M238 152 aa11.65□□□□□ -0.54
ATL3-202ENST00000535789 TOR2AQ5JU69 321 aa11.65□□□□□ -0.54
ATL3-202ENST00000535789 ZNF506Q5JVG8 444 aa11.65□□□□□ -0.54
ATL3-202ENST00000535789 HECTD4Q9Y4D8 3996 aa11.65□□□□□ -0.55
ATL3-202ENST00000535789 RAB19A4D1S5 217 aa11.64□□□□□ -0.55
ATL3-202ENST00000535789 TMEM189A5PLL7 270 aa11.64□□□□□ -0.55
ATL3-202ENST00000535789 RBFOX3A6NFN3 312 aa11.64□□□□□ -0.55
ATL3-202ENST00000535789 ATP5G3P48201 142 aa11.64□□□□□ -0.55
ATL3-202ENST00000535789 SRSF3P84103 164 aaKnown RBP11.64□□□□□ -0.55
ATL3-202ENST00000535789 ICAM4Q14773 271 aa11.64□□□□□ -0.55
ATL3-202ENST00000535789 COMMD7Q86VX2 200 aa11.64□□□□□ -0.55
ATL3-202ENST00000535789 Q9H3A6 140 aa11.64□□□□□ -0.55
ATL3-202ENST00000535789 DNAH17Q9UFH2 4485 aa11.64□□□□□ -0.55
ATL3-202ENST00000535789 NPIPB6E9PJ23 425 aa11.63□□□□□ -0.55
ATL3-202ENST00000535789 SPART-AS1P0CW21 52 aa11.63□□□□□ -0.55
ATL3-202ENST00000535789 TAGLN2P37802 199 aaKnown RBP11.63□□□□□ -0.55
ATL3-202ENST00000535789 RANP62826 216 aaKnown RBP11.63□□□□□ -0.55
ATL3-202ENST00000535789 CCDC28AQ8IWP9 274 aa11.63□□□□□ -0.55
ATL3-202ENST00000535789 LYPD1Q8N2G4 141 aa11.63□□□□□ -0.55
ATL3-202ENST00000535789 VAX2Q9UIW0 290 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms