RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 COX8AP10176 69 aa10.84□□□□□ -0.67
LPCAT3-203ENST00000535479 CSN1S1P47710 185 aa10.84□□□□□ -0.67
LPCAT3-203ENST00000535479 IL17RELQ6ZVW7 336 aa10.84□□□□□ -0.67
LPCAT3-203ENST00000535479 LINC00311Q8N616 119 aa10.84□□□□□ -0.67
LPCAT3-203ENST00000535479 FANCD2OSQ96PS1 177 aa10.84□□□□□ -0.67
LPCAT3-203ENST00000535479 AAMDCQ9H7C9 122 aa10.84□□□□□ -0.67
LPCAT3-203ENST00000535479 NBR2O15453 112 aa10.83□□□□□ -0.68
LPCAT3-203ENST00000535479 PRSS1P07477 247 aa10.83□□□□□ -0.68
LPCAT3-203ENST00000535479 CD3EP07766 207 aa10.83□□□□□ -0.68
LPCAT3-203ENST00000535479 HIST1H1AQ02539 215 aaPredicted RBP10.83□□□□□ -0.68
LPCAT3-203ENST00000535479 RBPJQ06330 500 aa10.83□□□□□ -0.68
LPCAT3-203ENST00000535479 SMAD5-AS1Q9Y6J3 95 aa10.83□□□□□ -0.68
LPCAT3-203ENST00000535479 F8W735 103 aaPredicted RBP10.82□□□□□ -0.68
LPCAT3-203ENST00000535479 FCER1GP30273 86 aa10.82□□□□□ -0.68
LPCAT3-203ENST00000535479 LEPP41159 167 aa10.82□□□□□ -0.68
LPCAT3-203ENST00000535479 C12orf54Q6X4T0 127 aa10.82□□□□□ -0.68
LPCAT3-203ENST00000535479 AP1S3Q96PC3 154 aa10.82□□□□□ -0.68
LPCAT3-203ENST00000535479 PPP1R14DQ9NXH3 145 aa10.82□□□□□ -0.68
LPCAT3-203ENST00000535479 K7EQM0 130 aa10.82□□□□□ -0.68
LPCAT3-203ENST00000535479 FGF6P10767 208 aa10.82□□□□□ -0.68
LPCAT3-203ENST00000535479 FAM104BQ5XKR9 115 aa10.82□□□□□ -0.68
LPCAT3-203ENST00000535479 INS-IGF2F8WCM5 200 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 APOBEC3AP31941 199 aaPredicted RBP10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 TMEM219Q86XT9 240 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 ORMDL3Q8N138 153 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 TMEM160Q9NX00 188 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 MRPS12O15235 138 aaKnown RBP10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 EFNA4P52798 201 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 IGFL3Q6UXB1 125 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 FER1L6-AS1Q8NA97 138 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 IFI27L1Q96BM0 104 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 TLN2Q9Y4G6 2542 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 FXYD2P54710 66 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 CT83Q5H943 113 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 GLMPQ8WWB7 406 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 FOXC2Q99958 501 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 GFRA4Q9GZZ7 299 aa10.81□□□□□ -0.68
LPCAT3-203ENST00000535479 CDKN1BP46527 198 aa10.8□□□□□ -0.68
LPCAT3-203ENST00000535479 PRR25Q96S07 402 aa10.8□□□□□ -0.68
LPCAT3-203ENST00000535479 C21orf62Q9NYP8 219 aa10.8□□□□□ -0.68
LPCAT3-203ENST00000535479 C11orf21Q9P2W6 132 aa10.8□□□□□ -0.68
LPCAT3-203ENST00000535479 IGHG4P01861 327 aa10.8□□□□□ -0.68
LPCAT3-203ENST00000535479 RPL24P83731 157 aaKnown RBP10.8□□□□□ -0.68
LPCAT3-203ENST00000535479 FAM162BQ5T6X4 162 aa10.8□□□□□ -0.68
LPCAT3-203ENST00000535479 ZNF575Q86XF7 245 aa10.8□□□□□ -0.68
LPCAT3-203ENST00000535479 CFHR4Q92496 578 aa10.8□□□□□ -0.68
LPCAT3-203ENST00000535479 SOX21Q9Y651 276 aaPredicted RBP10.8□□□□□ -0.68
LPCAT3-203ENST00000535479 CLEC3BP05452 202 aa10.79□□□□□ -0.68
LPCAT3-203ENST00000535479 CLEC19AQ6UXS0 136 aa10.79□□□□□ -0.68
LPCAT3-203ENST00000535479 OR2K2Q8NGT1 345 aa10.79□□□□□ -0.68
LPCAT3-203ENST00000535479 ASCL5Q7RTU5 278 aa10.79□□□□□ -0.68
LPCAT3-203ENST00000535479 NEGR1Q7Z3B1 354 aa10.79□□□□□ -0.68
LPCAT3-203ENST00000535479 ARPC1AQ92747 370 aa10.79□□□□□ -0.68
LPCAT3-203ENST00000535479 DPM3Q9P2X0 92 aa10.79□□□□□ -0.68
LPCAT3-203ENST00000535479 ZFYVE26Q68DK2 2539 aa10.79□□□□□ -0.68
LPCAT3-203ENST00000535479 A0A0G2JLM5 398 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 A1L4Q6 167 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 CD5LO43866 347 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 ZFP36P26651 326 aaKnown RBP10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 EMP1P54849 157 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 PLP1P60201 277 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 AMTNQ6UX39 209 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 VSTM5A8MXK1 200 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 NDUFA3O95167 84 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 SRD5A1P18405 259 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 COTL1Q14019 142 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 C5orf64Q2M2E5 130 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 HBDP02042 147 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 CTSGP08311 255 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 C15orf32Q32M92 178 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 TMEM158Q8WZ71 300 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 TMEM14CQ9P0S9 112 aa10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 PEF1Q9UBV8 284 aaKnown RBP10.78□□□□□ -0.68
LPCAT3-203ENST00000535479 TRAV40A0A0B4J280 105 aa10.77□□□□□ -0.69
LPCAT3-203ENST00000535479 MFAP4P55083 255 aa10.77□□□□□ -0.69
LPCAT3-203ENST00000535479 NHP2Q9NX24 153 aaKnown RBP10.77□□□□□ -0.69
LPCAT3-203ENST00000535479 KAAG1Q9UBP8 84 aa10.77□□□□□ -0.69
LPCAT3-203ENST00000535479 HOXB4P17483 251 aaPredicted RBP10.77□□□□□ -0.69
LPCAT3-203ENST00000535479 TMEM30BQ3MIR4 351 aa10.77□□□□□ -0.69
LPCAT3-203ENST00000535479 VMO1Q7Z5L0 202 aa10.77□□□□□ -0.69
LPCAT3-203ENST00000535479 C2CD3Q4AC94 2353 aa10.76□□□□□ -0.69
LPCAT3-203ENST00000535479 SMAD7O15105 426 aaKnown RBP10.76□□□□□ -0.69
LPCAT3-203ENST00000535479 WI2-2373I1.2A0A1W2PRP0 233 aa10.76□□□□□ -0.69
LPCAT3-203ENST00000535479 LY6LH3BQJ8 138 aa10.76□□□□□ -0.69
LPCAT3-203ENST00000535479 ZC2HC1BQ5TFG8 222 aa10.76□□□□□ -0.69
LPCAT3-203ENST00000535479 C16orf54Q6UWD8 224 aa10.76□□□□□ -0.69
LPCAT3-203ENST00000535479 RNF185Q96GF1 192 aa10.76□□□□□ -0.69
LPCAT3-203ENST00000535479 SPCS1Q9Y6A9 102 aa10.76□□□□□ -0.69
LPCAT3-203ENST00000535479 CACNA1AO00555 2505 aa10.76□□□□□ -0.69
LPCAT3-203ENST00000535479 NIPBLQ6KC79 2804 aaeCLIP10.75□□□□□ -0.69
LPCAT3-203ENST00000535479 A0A1W2PPR1 153 aa10.75□□□□□ -0.69
LPCAT3-203ENST00000535479 B9A039 149 aa10.75□□□□□ -0.69
LPCAT3-203ENST00000535479 F6UB75 175 aa10.75□□□□□ -0.69
LPCAT3-203ENST00000535479 TNFRSF6BO95407 300 aa10.75□□□□□ -0.69
LPCAT3-203ENST00000535479 SAPCD1Q5SSQ6 148 aa10.75□□□□□ -0.69
LPCAT3-203ENST00000535479 MAPKAPK5-AS1Q8N8E1 139 aa10.75□□□□□ -0.69
LPCAT3-203ENST00000535479 IGLV11-55A0A075B6I3 123 aa10.74□□□□□ -0.69
LPCAT3-203ENST00000535479 M0R381 172 aa10.74□□□□□ -0.69
LPCAT3-203ENST00000535479 RPL11P62913 178 aaKnown RBP10.74□□□□□ -0.69
LPCAT3-203ENST00000535479 OR1N2Q8NGR9 330 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms