RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 FFAR4Q5NUL3 377 aa6.71□□□□□ -1.34
CDCA3-204ENST00000535406 GFI1BQ5VTD9 330 aa6.71□□□□□ -1.34
CDCA3-204ENST00000535406 EXOC3-AS1Q8N2X6 119 aa6.71□□□□□ -1.34
CDCA3-204ENST00000535406 TMEM263Q8WUH6 116 aaKnown RBP6.71□□□□□ -1.34
CDCA3-204ENST00000535406 FAM210BQ96KR6 192 aa6.71□□□□□ -1.34
CDCA3-204ENST00000535406 FAM167A-AS1Q96KT0 104 aa6.71□□□□□ -1.34
CDCA3-204ENST00000535406 OR51M1Q9H341 326 aa6.71□□□□□ -1.34
CDCA3-204ENST00000535406 DNAH6Q9C0G6 4158 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 PLAC8L1A1L4L8 177 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 OR10J4P0C629 311 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 P0DMU3 169 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 FAM231AP0DMU4 169 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 FAM231CP0DMU5 169 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 CT45A10P0DMU9 189 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 DEFB130BP0DP73 79 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 DEFB130AP0DP74 79 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 ICAM4Q14773 271 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 KHDC3LQ587J8 217 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 ZNF493Q6ZR52 646 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 RNASE8Q8TDE3 154 aaKnown RBP6.7□□□□□ -1.34
CDCA3-204ENST00000535406 PAXXQ9BUH6 204 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 MED28Q9H204 178 aa6.7□□□□□ -1.34
CDCA3-204ENST00000535406 NBEAP1P0C6P0 100 aa6.69□□□□□ -1.34
CDCA3-204ENST00000535406 TAS2R45P59539 299 aa6.69□□□□□ -1.34
CDCA3-204ENST00000535406 UBE2L3P68036 154 aaKnown RBP6.69□□□□□ -1.34
CDCA3-204ENST00000535406 ERCC8Q13216 396 aa6.69□□□□□ -1.34
CDCA3-204ENST00000535406 FCN2Q15485 313 aa6.69□□□□□ -1.34
CDCA3-204ENST00000535406 FAM122CQ6P4D5 195 aa6.69□□□□□ -1.34
CDCA3-204ENST00000535406 CCDC28AQ8IWP9 274 aa6.69□□□□□ -1.34
CDCA3-204ENST00000535406 FXYD5Q96DB9 178 aa6.69□□□□□ -1.34
CDCA3-204ENST00000535406 PHYHIPLQ96FC7 376 aa6.69□□□□□ -1.34
CDCA3-204ENST00000535406 TIMM8BQ9Y5J9 83 aaPredicted RBP6.69□□□□□ -1.34
CDCA3-204ENST00000535406 FRAS1Q86XX4 4008 aa6.68□□□□□ -1.34
CDCA3-204ENST00000535406 BIRC6Q9NR09 4857 aa6.68□□□□□ -1.34
CDCA3-204ENST00000535406 IGKV2-40A0A087WW87 121 aaPredicted RBP6.68□□□□□ -1.34
CDCA3-204ENST00000535406 TRAV12-3A0A0B4J271 114 aa6.68□□□□□ -1.34
CDCA3-204ENST00000535406 C7orf71A4D174 169 aa6.68□□□□□ -1.34
CDCA3-204ENST00000535406 IGKV2D-40P01614 121 aaPredicted RBP6.68□□□□□ -1.34
CDCA3-204ENST00000535406 SLC25A5P05141 298 aaKnown RBP6.68□□□□□ -1.34
CDCA3-204ENST00000535406 ZNF266Q14584 549 aa6.68□□□□□ -1.34
CDCA3-204ENST00000535406 ACOT6Q3I5F7 207 aaPredicted RBP6.68□□□□□ -1.34
CDCA3-204ENST00000535406 TMEM78Q5T7P6 136 aa6.68□□□□□ -1.34
CDCA3-204ENST00000535406 TMEM88Q6PEY1 159 aa6.68□□□□□ -1.34
CDCA3-204ENST00000535406 UBE2DNLQ8IWF7 75 aa6.68□□□□□ -1.34
CDCA3-204ENST00000535406 LINC00477Q96M19 166 aa6.68□□□□□ -1.34
CDCA3-204ENST00000535406 PYGO2Q9BRQ0 406 aa6.68□□□□□ -1.34
CDCA3-204ENST00000535406 WFDC1Q9HC57 220 aa6.68□□□□□ -1.34
CDCA3-204ENST00000535406 NOP10Q9NPE3 64 aaKnown RBP6.68□□□□□ -1.34
CDCA3-204ENST00000535406 KLLNB2CW77 178 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 ATP5G1P05496 136 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 GIPP09681 153 aaPredicted RBP6.67□□□□□ -1.34
CDCA3-204ENST00000535406 M6PRP20645 277 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 CSN1S1P47710 185 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 ATP5G3P48201 142 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 RANP62826 216 aaKnown RBP6.67□□□□□ -1.34
CDCA3-204ENST00000535406 BTN1A1Q13410 526 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 C9orf47Q6ZRZ4 202 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 LYPD1Q8N2G4 141 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 POM121L12Q8N7R1 296 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 C15orf53Q8NAA6 179 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 ASB13Q8WXK3 278 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 ZNF503Q96F45 646 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 FAM19A4Q96LR4 140 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 AQP10Q96PS8 301 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 AGPAT4-IT1Q9H0P7 198 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 Q9H3A6 140 aa6.67□□□□□ -1.34
CDCA3-204ENST00000535406 A0A1W2PPV4 95 aa6.66□□□□□ -1.34
CDCA3-204ENST00000535406 CBY3A6NI87 242 aa6.66□□□□□ -1.34
CDCA3-204ENST00000535406 SNURFLB1AK76 121 aa6.66□□□□□ -1.34
CDCA3-204ENST00000535406 F5H768 121 aa6.66□□□□□ -1.34
CDCA3-204ENST00000535406 GPX1P07203 203 aa6.66□□□□□ -1.34
CDCA3-204ENST00000535406 CRISP2P16562 243 aa6.66□□□□□ -1.34
CDCA3-204ENST00000535406 RAB2AP61019 212 aa6.66□□□□□ -1.34
CDCA3-204ENST00000535406 RGS21Q2M5E4 152 aa6.66□□□□□ -1.34
CDCA3-204ENST00000535406 HSD17B11Q8NBQ5 300 aa6.66□□□□□ -1.34
CDCA3-204ENST00000535406 VGLL1Q99990 258 aa6.66□□□□□ -1.34
CDCA3-204ENST00000535406 ZNF492Q9P255 531 aa6.66□□□□□ -1.34
CDCA3-204ENST00000535406 RBAKDNA6NC62 111 aa6.65□□□□□ -1.35
CDCA3-204ENST00000535406 EIF3GO75821 320 aaKnown RBP eCLIP6.65□□□□□ -1.35
CDCA3-204ENST00000535406 NMBP08949 121 aa6.65□□□□□ -1.35
CDCA3-204ENST00000535406 RNASE4P34096 147 aaKnown RBP6.65□□□□□ -1.35
CDCA3-204ENST00000535406 ZNF138P52744 262 aa6.65□□□□□ -1.35
CDCA3-204ENST00000535406 CD300CQ08708 224 aa6.65□□□□□ -1.35
CDCA3-204ENST00000535406 PQLC2Q6ZP29 291 aa6.65□□□□□ -1.35
CDCA3-204ENST00000535406 ZFAND2AQ8N6M9 145 aa6.65□□□□□ -1.35
CDCA3-204ENST00000535406 INO80EQ8NBZ0 244 aaPredicted RBP6.65□□□□□ -1.35
CDCA3-204ENST00000535406 ZNF680Q8NEM1 530 aa6.65□□□□□ -1.35
CDCA3-204ENST00000535406 OR10G4Q8NGN3 311 aa6.65□□□□□ -1.35
CDCA3-204ENST00000535406 OR10G9Q8NGN4 311 aa6.65□□□□□ -1.35
CDCA3-204ENST00000535406 OR10G7Q8NGN6 311 aa6.65□□□□□ -1.35
CDCA3-204ENST00000535406 Q8TAT8 98 aa6.65□□□□□ -1.35
CDCA3-204ENST00000535406 DNAH10Q8IVF4 4471 aa6.64□□□□□ -1.35
CDCA3-204ENST00000535406 FXYD6-FXYD2A0A087WZ82 144 aa6.64□□□□□ -1.35
CDCA3-204ENST00000535406 TRBV7-9A0A0J9YWB2 115 aa6.64□□□□□ -1.35
CDCA3-204ENST00000535406 GAGE12BA1L429 117 aa6.64□□□□□ -1.35
CDCA3-204ENST00000535406 ZNF324O75467 553 aaPredicted RBP6.64□□□□□ -1.35
CDCA3-204ENST00000535406 GAGE7O76087 117 aa6.64□□□□□ -1.35
CDCA3-204ENST00000535406 GAGE12FP0CL80 117 aa6.64□□□□□ -1.35
CDCA3-204ENST00000535406 GAGE12GP0CL81 117 aa6.64□□□□□ -1.35
CDCA3-204ENST00000535406 GAGE12IP0CL82 117 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms