RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 ZNRF2Q8NHG8 242 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 THAP6Q8TBB0 222 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 GNPNAT1Q96EK6 184 aaPredicted RBP11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 LINC00477Q96M19 166 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 NMES1Q9C002 83 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 AAMDCQ9H7C9 122 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 NBDYA0A0U1RRE5 68 aa11.31□□□□□ -0.6
CLSTN3-204ENST00000535313 C7orf71A4D174 169 aa11.31□□□□□ -0.6
CLSTN3-204ENST00000535313 NDUFB4O95168 129 aa11.31□□□□□ -0.6
CLSTN3-204ENST00000535313 M6PRP20645 277 aa11.31□□□□□ -0.6
CLSTN3-204ENST00000535313 CYCSP99999 105 aaKnown RBP11.31□□□□□ -0.6
CLSTN3-204ENST00000535313 LRRC37A5PQ49AS3 106 aa11.31□□□□□ -0.6
CLSTN3-204ENST00000535313 GCSAMLQ5JQS6 135 aa11.31□□□□□ -0.6
CLSTN3-204ENST00000535313 KRTAP17-1Q9BYP8 105 aa11.31□□□□□ -0.6
CLSTN3-204ENST00000535313 KCNIP2Q9NS61 270 aa11.31□□□□□ -0.6
CLSTN3-204ENST00000535313 LINC00588Q9Y4M8 146 aa11.31□□□□□ -0.6
CLSTN3-204ENST00000535313 TRAV26-1A0A087WT03 109 aa11.3□□□□□ -0.6
CLSTN3-204ENST00000535313 DAZ2Q13117 558 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-204ENST00000535313 SSX7Q7RTT5 188 aa11.3□□□□□ -0.6
CLSTN3-204ENST00000535313 EXOC3-AS1Q8N2X6 119 aa11.3□□□□□ -0.6
CLSTN3-204ENST00000535313 ZNF680Q8NEM1 530 aa11.3□□□□□ -0.6
CLSTN3-204ENST00000535313 SLC25A2Q9BXI2 301 aa11.3□□□□□ -0.6
CLSTN3-204ENST00000535313 OR5AC2Q9NZP5 309 aa11.3□□□□□ -0.6
CLSTN3-204ENST00000535313 A0A0J9YY99 117 aa11.29□□□□□ -0.6
CLSTN3-204ENST00000535313 KLLNB2CW77 178 aa11.29□□□□□ -0.6
CLSTN3-204ENST00000535313 ICAM4Q14773 271 aa11.29□□□□□ -0.6
CLSTN3-204ENST00000535313 MIR17HGQ75NE6 70 aa11.29□□□□□ -0.6
CLSTN3-204ENST00000535313 RXFP4Q8TDU9 374 aa11.29□□□□□ -0.6
CLSTN3-204ENST00000535313 ZNF503Q96F45 646 aa11.29□□□□□ -0.6
CLSTN3-204ENST00000535313 AGPAT4-IT1Q9H0P7 198 aa11.29□□□□□ -0.6
CLSTN3-204ENST00000535313 G3V3Q6 166 aa11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 GPX1P07203 203 aa11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 NBEAP1P0C6P0 100 aa11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 TMEM78Q5T7P6 136 aa11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 FAM122CQ6P4D5 195 aa11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 Q6ZNX1 250 aa11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 C6orf223Q8N319 242 aa11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 PPP1R1CQ8WVI7 109 aa11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 FAM167A-AS1Q96KT0 104 aa11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 FAM19A4Q96LR4 140 aa11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 MRPL32Q9BYC8 188 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 MED28Q9H204 178 aa11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 OR51M1Q9H341 326 aa11.28□□□□□ -0.6
CLSTN3-204ENST00000535313 TRGV2A0A075B6R0 118 aa11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 C17orf112F2Z3M2 114 aa11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 ZNF324O75467 553 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 HOXA5P20719 270 aa11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 CD300CQ08708 224 aa11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 BTN1A1Q13410 526 aa11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 Q5BKY6 102 aa11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 C9orf47Q6ZRZ4 202 aa11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 Q6ZTI0 123 aa11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 EIF4E3Q8N5X7 224 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 LINC00467Q9BRT7 94 aa11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 PAXXQ9BUH6 204 aa11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 WDR61Q9GZS3 305 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 GSN-AS1Q9NRJ2 163 aa11.27□□□□□ -0.61
CLSTN3-204ENST00000535313 IGKV2-40A0A087WW87 121 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-204ENST00000535313 H3BNG1 76 aa11.26□□□□□ -0.61
CLSTN3-204ENST00000535313 MPC2O95563 127 aa11.26□□□□□ -0.61
CLSTN3-204ENST00000535313 IGKV2D-40P01614 121 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-204ENST00000535313 NMBP08949 121 aa11.26□□□□□ -0.61
CLSTN3-204ENST00000535313 CRISP2P16562 243 aa11.26□□□□□ -0.61
CLSTN3-204ENST00000535313 ANXA2RQ3ZCQ2 193 aa11.26□□□□□ -0.61
CLSTN3-204ENST00000535313 Q9H8V8 135 aa11.26□□□□□ -0.61
CLSTN3-204ENST00000535313 FUT9Q9Y231 359 aa11.26□□□□□ -0.61
CLSTN3-204ENST00000535313 TRGV1A0A0A0MS02 117 aa11.25□□□□□ -0.61
CLSTN3-204ENST00000535313 RGS13O14921 159 aa11.25□□□□□ -0.61
CLSTN3-204ENST00000535313 OR10J4P0C629 311 aa11.25□□□□□ -0.61
CLSTN3-204ENST00000535313 PET100P0DJ07 73 aa11.25□□□□□ -0.61
CLSTN3-204ENST00000535313 C11orf72Q8NBR9 251 aa11.25□□□□□ -0.61
CLSTN3-204ENST00000535313 FXYD5Q96DB9 178 aa11.25□□□□□ -0.61
CLSTN3-204ENST00000535313 ATP5SQ99766 215 aa11.25□□□□□ -0.61
CLSTN3-204ENST00000535313 VGLL1Q99990 258 aa11.25□□□□□ -0.61
CLSTN3-204ENST00000535313 PCLOQ9Y6V0 5065 aa11.24□□□□□ -0.61
CLSTN3-204ENST00000535313 OR7C2O60412 319 aa11.24□□□□□ -0.61
CLSTN3-204ENST00000535313 CSN1S1P47710 185 aa11.24□□□□□ -0.61
CLSTN3-204ENST00000535313 TNP2Q05952 138 aa11.24□□□□□ -0.61
CLSTN3-204ENST00000535313 ZNF575Q86XF7 245 aa11.24□□□□□ -0.61
CLSTN3-204ENST00000535313 ZFAND2AQ8N6M9 145 aa11.24□□□□□ -0.61
CLSTN3-204ENST00000535313 C18orf15Q96N68 181 aa11.24□□□□□ -0.61
CLSTN3-204ENST00000535313 ZNF492Q9P255 531 aa11.24□□□□□ -0.61
CLSTN3-204ENST00000535313 ZNF138P52744 262 aa11.23□□□□□ -0.61
CLSTN3-204ENST00000535313 TCL1AP56279 114 aa11.23□□□□□ -0.61
CLSTN3-204ENST00000535313 ESRGQ1W209 222 aa11.23□□□□□ -0.61
CLSTN3-204ENST00000535313 TTC32Q5I0X7 151 aa11.23□□□□□ -0.61
CLSTN3-204ENST00000535313 SCGB1C1Q8TD33 95 aa11.23□□□□□ -0.61
CLSTN3-204ENST00000535313 PHYHIPLQ96FC7 376 aa11.23□□□□□ -0.61
CLSTN3-204ENST00000535313 ARPC5LQ9BPX5 153 aa11.23□□□□□ -0.61
CLSTN3-204ENST00000535313 MBD2Q9UBB5 411 aa11.23□□□□□ -0.61
CLSTN3-204ENST00000535313 SPINK4O60575 86 aa11.22□□□□□ -0.61
CLSTN3-204ENST00000535313 IFNA5P01569 189 aa11.22□□□□□ -0.61
CLSTN3-204ENST00000535313 GIPP09681 153 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-204ENST00000535313 RANP62826 216 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-204ENST00000535313 UBE2L3P68036 154 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-204ENST00000535313 FFAR4Q5NUL3 377 aa11.22□□□□□ -0.61
CLSTN3-204ENST00000535313 IBA57Q5T440 356 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-204ENST00000535313 LYPD1Q8N2G4 141 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms