RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 TMEM189A5PLL7 270 aa6.39□□□□□ -1.39
CCDC90B-219ENST00000534753 MPDU1O75352 247 aa6.39□□□□□ -1.39
CCDC90B-219ENST00000534753 MPC2O95563 127 aa6.39□□□□□ -1.39
CCDC90B-219ENST00000534753 AMBPP02760 352 aa6.39□□□□□ -1.39
CCDC90B-219ENST00000534753 PET100P0DJ07 73 aa6.39□□□□□ -1.39
CCDC90B-219ENST00000534753 IGLC2P0DOY2 106 aa6.39□□□□□ -1.39
CCDC90B-219ENST00000534753 MIR17HGQ75NE6 70 aa6.39□□□□□ -1.39
CCDC90B-219ENST00000534753 ZNF586Q9NXT0 402 aa6.39□□□□□ -1.39
CCDC90B-219ENST00000534753 ALMS1Q8TCU4 4167 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 SACSQ9NZJ4 4579 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 C17orf112F2Z3M2 114 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 CRXO43186 299 aaPredicted RBP6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 IFNA5P01569 189 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 CXCL2P19875 107 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 RPL12P30050 165 aaKnown RBP6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 DAD1P61803 113 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 FCN2Q15485 313 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 LCE4AQ5TA78 99 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 LGALS9CQ6DKI2 356 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 SCGB1C1Q8TD33 95 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 ATP5SQ99766 215 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 NIPSNAP3BQ9BS92 247 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 RNF126Q9BV68 326 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 MBD2Q9UBB5 411 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 APLNQ9ULZ1 77 aa6.38□□□□□ -1.39
CCDC90B-219ENST00000534753 A8MTW9 85 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 M0R3E3 92 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 EIF3GO75821 320 aaKnown RBP eCLIP6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 OR10J4P0C629 311 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 DEFB130BP0DP73 79 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 DEFB130AP0DP74 79 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 AZU1P20160 251 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 CDKN1BP46527 198 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 FAM3BP58499 235 aaPredicted RBP6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 ERCC8Q13216 396 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 GUK1Q16774 197 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 FFAR4Q5NUL3 377 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 FAM122CQ6P4D5 195 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 EXOC3-AS1Q8N2X6 119 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 SAT2Q96F10 170 aaPredicted RBP6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 NDUFAF3Q9BU61 184 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 SLC25A2Q9BXI2 301 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 WDR61Q9GZS3 305 aaKnown RBP6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 MED28Q9H204 178 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 HSPB11Q9Y547 144 aa6.37□□□□□ -1.39
CCDC90B-219ENST00000534753 TRBV19A0A075B6N1 114 aa6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 TRAV12-3A0A0B4J271 114 aa6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 OR7C2O60412 319 aa6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 HIST1H1EP10412 219 aaKnown RBP6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 TSPOP30536 169 aa6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 TCTAP57738 103 aa6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 ZNF503Q96F45 646 aa6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 PAXXQ9BUH6 204 aa6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 OR51M1Q9H341 326 aa6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 AAMDCQ9H7C9 122 aa6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 KCNIP2Q9NS61 270 aa6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 TMEM14CQ9P0S9 112 aa6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 PLECQ15149 4684 aaKnown RBP6.36□□□□□ -1.39
CCDC90B-219ENST00000534753 TEX48A0A1B0GUV7 120 aa6.35□□□□□ -1.39
CCDC90B-219ENST00000534753 NDUFB4O95168 129 aa6.35□□□□□ -1.39
CCDC90B-219ENST00000534753 PTTG1O95997 202 aa6.35□□□□□ -1.39
CCDC90B-219ENST00000534753 NBEAP1P0C6P0 100 aa6.35□□□□□ -1.39
CCDC90B-219ENST00000534753 CT45A10P0DMU9 189 aa6.35□□□□□ -1.39
CCDC90B-219ENST00000534753 LEPP41159 167 aa6.35□□□□□ -1.39
CCDC90B-219ENST00000534753 GFI1BQ5VTD9 330 aa6.35□□□□□ -1.39
CCDC90B-219ENST00000534753 UBE2DNLQ8IWF7 75 aa6.35□□□□□ -1.39
CCDC90B-219ENST00000534753 WFDC1Q9HC57 220 aa6.35□□□□□ -1.39
CCDC90B-219ENST00000534753 FUT9Q9Y231 359 aa6.35□□□□□ -1.39
CCDC90B-219ENST00000534753 IGKV2-40A0A087WW87 121 aaPredicted RBP6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 F5H768 121 aa6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 IGKV2D-40P01614 121 aaPredicted RBP6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 RNASE4P34096 147 aaKnown RBP6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 TAS2R60P59551 318 aa6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 RANP62826 216 aaKnown RBP6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 UBE2L3P68036 154 aaKnown RBP6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 TMEM256Q8N2U0 113 aa6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 FAM167A-AS1Q96KT0 104 aa6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 HYLS1Q96M11 299 aa6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 MRPL32Q9BYC8 188 aaKnown RBP6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 NOP10Q9NPE3 64 aaKnown RBP6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 RPH3ALQ9UNE2 315 aa6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 DNAH1Q9P2D7 4330 aa6.34□□□□□ -1.39
CCDC90B-219ENST00000534753 HYDINQ4G0P3 5121 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 A0A1W2PPV4 95 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 H7BYZ3 331 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 M0R2N4 97 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 HMGB3O15347 200 aaKnown RBP6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 ZNF253O75346 499 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 TMEM78Q5T7P6 136 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 TMEM88Q6PEY1 159 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 Q6ZNX1 250 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 HSD17B11Q8NBQ5 300 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 FXYD5Q96DB9 178 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 PHYHIPLQ96FC7 376 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 C16orf74Q96GX8 76 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 VGLL1Q99990 258 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 AGPAT4-IT1Q9H0P7 198 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 PRELID1Q9Y255 219 aa6.33□□□□□ -1.4
CCDC90B-219ENST00000534753 FXYD6-FXYD2A0A087WZ82 144 aa6.32□□□□□ -1.4
CCDC90B-219ENST00000534753 LYRM9A8MSI8 78 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms