RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 Q8WTZ3 238 aa4.37□□□□□ -1.71
CHKA-208ENST00000533910 USMG5Q96IX5 58 aa4.37□□□□□ -1.71
CHKA-208ENST00000533910 SMIM7Q9BQ49 75 aa4.37□□□□□ -1.71
CHKA-208ENST00000533910 TCEAL7Q9BRU2 100 aa4.37□□□□□ -1.71
CHKA-208ENST00000533910 NDUFAF3Q9BU61 184 aa4.37□□□□□ -1.71
CHKA-208ENST00000533910 PARLQ9H300 379 aa4.37□□□□□ -1.71
CHKA-208ENST00000533910 OR51M1Q9H341 326 aa4.37□□□□□ -1.71
CHKA-208ENST00000533910 ZNF702PQ9H963 129 aa4.37□□□□□ -1.71
CHKA-208ENST00000533910 NAT8Q9UHE5 227 aa4.37□□□□□ -1.71
CHKA-208ENST00000533910 SMPXQ9UHP9 88 aa4.37□□□□□ -1.71
CHKA-208ENST00000533910 S4R3C0 116 aa4.37□□□□□ -1.71
CHKA-208ENST00000533910 SONP18583 2426 aaKnown RBP4.37□□□□□ -1.71
CHKA-208ENST00000533910 ZFHX3Q15911 3703 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 ACANP16112 2415 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 OTOGQ6ZRI0 2925 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 A0A087WWC5 75 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.36□□□□□ -1.71
CHKA-208ENST00000533910 IGLV5-39A0A0G2JS06 123 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 C7orf77A4D0Y5 90 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 ZNF98A6NK75 572 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 ZNF727A8MUV8 499 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 B4DEV8 164 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 C9JCJ5 164 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 INAFM1C9JVW0 142 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 MRPS12O15235 138 aaKnown RBP4.36□□□□□ -1.71
CHKA-208ENST00000533910 GAGE7O76087 117 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 IGHG4P01861 327 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 TRGV3P03979 118 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 GAGE12FP0CL80 117 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 GAGE12GP0CL81 117 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 GAGE12IP0CL82 117 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 IGLC2P0DOY2 106 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 PSMB8P28062 276 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 TPPP2P59282 170 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 ATP5G2Q06055 141 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 GAGE1Q13065 139 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 GAGE4Q13068 117 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 BTN1A1Q13410 526 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 KIAA0141Q14154 515 aaPredicted RBP4.36□□□□□ -1.71
CHKA-208ENST00000533910 S100A7AQ86SG5 101 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 SIGLECL1Q8N7X8 197 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 ZNF738Q8NE65 137 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 MYOZ3Q8TDC0 251 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 RPUSD4Q96CM3 377 aaKnown RBP4.36□□□□□ -1.71
CHKA-208ENST00000533910 TVP23CQ96ET8 276 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 SDF2L1Q9HCN8 221 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 LINC00527Q9UJ94 153 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 AKAP9Q99996 3911 aa4.36□□□□□ -1.71
CHKA-208ENST00000533910 TRBV20OR9-2A0A075B6H5 130 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 A0A0G2JLM5 398 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 CLPSL1A2RUU4 121 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 BMPR1BO00238 502 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 SIVA1O15304 175 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 HIST1H1EP10412 219 aaKnown RBP4.35□□□□□ -1.71
CHKA-208ENST00000533910 PMCHP20382 165 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 S100A7P31151 101 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 SNRPEP62304 92 aaKnown RBP4.35□□□□□ -1.71
CHKA-208ENST00000533910 RPL23P62829 140 aaKnown RBP4.35□□□□□ -1.71
CHKA-208ENST00000533910 PDE6HQ13956 83 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 TMEM241Q24JQ0 296 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 LEMD1Q68G75 181 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 TOMM20LQ6UXN7 152 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 CLEC19AQ6UXS0 136 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 ZNF329Q86UD4 541 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 PRIMA1Q86XR5 153 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 BPIFA4PQ86YQ2 179 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 CBLN2Q8IUK8 224 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 ZFP82Q8N141 532 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 DERL1Q9BUN8 251 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 MCRIP2Q9BUT9 160 aaKnown RBP4.35□□□□□ -1.71
CHKA-208ENST00000533910 TUBA4BQ9H853 241 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 RABAC1Q9UI14 185 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 LY96Q9Y6Y9 160 aa4.35□□□□□ -1.71
CHKA-208ENST00000533910 TRBV19A0A075B6N1 114 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 A0A1B0GV72 72 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 DNAJC9-AS1A6NH13 148 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 PPP5D1E7EU14 171 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 H3BTX0 84 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 ZNF253O75346 499 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 HSBP1O75506 76 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 NBEAP1P0C6P0 100 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 CD99P14209 185 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 RPL7P18124 248 aaKnown RBP4.34□□□□□ -1.71
CHKA-208ENST00000533910 SRP14P37108 136 aaKnown RBP4.34□□□□□ -1.71
CHKA-208ENST00000533910 RPL35P42766 123 aaKnown RBP4.34□□□□□ -1.71
CHKA-208ENST00000533910 SEC61BP60468 96 aaKnown RBP4.34□□□□□ -1.71
CHKA-208ENST00000533910 MRPL23Q16540 153 aaKnown RBP4.34□□□□□ -1.71
CHKA-208ENST00000533910 C1orf194Q5T5A4 169 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 LINC01551Q86U37 167 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 LYPD1Q8N2G4 141 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 MTURNQ8N3F0 131 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 C5orf17Q8NAS9 161 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 HIST1H2BAQ96A08 127 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 IGF2BP2-AS1Q96M15 143 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 YPEL4Q96NS1 127 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 RPS10P5Q9NQ39 176 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 OTORQ9NRC9 128 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 SMCO4Q9NRQ5 59 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 TMEM242Q9NWH2 141 aa4.34□□□□□ -1.71
CHKA-208ENST00000533910 ZNF586Q9NXT0 402 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms