RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 EIF4E3Q8N5X7 224 aaKnown RBP12.31□□□□□ -0.44
UBXN1-216ENST00000533908 OR1L4Q8NGR5 311 aa12.31□□□□□ -0.44
UBXN1-216ENST00000533908 MRPL53Q96EL3 112 aaKnown RBP12.31□□□□□ -0.44
UBXN1-216ENST00000533908 UQCC1Q9NVA1 299 aa12.31□□□□□ -0.44
UBXN1-216ENST00000533908 EPM2AB3EWF7 344 aa12.3□□□□□ -0.44
UBXN1-216ENST00000533908 NXPH4O95158 308 aa12.3□□□□□ -0.44
UBXN1-216ENST00000533908 IGHV3-53P01767 116 aa12.3□□□□□ -0.44
UBXN1-216ENST00000533908 PYYP10082 97 aa12.3□□□□□ -0.44
UBXN1-216ENST00000533908 CAV2P51636 162 aa12.3□□□□□ -0.44
UBXN1-216ENST00000533908 TCL1AP56279 114 aa12.3□□□□□ -0.44
UBXN1-216ENST00000533908 EXOC3-AS1Q8N2X6 119 aa12.3□□□□□ -0.44
UBXN1-216ENST00000533908 ZNF680Q8NEM1 530 aa12.3□□□□□ -0.44
UBXN1-216ENST00000533908 LINC00477Q96M19 166 aa12.3□□□□□ -0.44
UBXN1-216ENST00000533908 PGPEP1Q9NXJ5 209 aa12.3□□□□□ -0.44
UBXN1-216ENST00000533908 IGSF23A1L1A6 192 aa12.29□□□□□ -0.44
UBXN1-216ENST00000533908 CENPXA8MT69 81 aa12.29□□□□□ -0.44
UBXN1-216ENST00000533908 PAX4O43316 350 aa12.29□□□□□ -0.44
UBXN1-216ENST00000533908 HIST1H1EP10412 219 aaKnown RBP12.29□□□□□ -0.44
UBXN1-216ENST00000533908 IL7P13232 177 aa12.29□□□□□ -0.44
UBXN1-216ENST00000533908 CRISP2P16562 243 aa12.29□□□□□ -0.44
UBXN1-216ENST00000533908 GCSAMLQ5JQS6 135 aa12.29□□□□□ -0.44
UBXN1-216ENST00000533908 LYPD1Q8N2G4 141 aa12.29□□□□□ -0.44
UBXN1-216ENST00000533908 ZFAND2AQ8N6M9 145 aa12.29□□□□□ -0.44
UBXN1-216ENST00000533908 PFDN5Q99471 154 aa12.29□□□□□ -0.44
UBXN1-216ENST00000533908 TMEM14CQ9P0S9 112 aa12.29□□□□□ -0.44
UBXN1-216ENST00000533908 IGKV2-40A0A087WW87 121 aaPredicted RBP12.28□□□□□ -0.44
UBXN1-216ENST00000533908 FAM25EA8MYX2 175 aa12.28□□□□□ -0.44
UBXN1-216ENST00000533908 MPDU1O75352 247 aa12.28□□□□□ -0.44
UBXN1-216ENST00000533908 IGKV2D-40P01614 121 aaPredicted RBP12.28□□□□□ -0.44
UBXN1-216ENST00000533908 IL15RAQ13261 267 aa12.28□□□□□ -0.44
UBXN1-216ENST00000533908 ZNF846Q147U1 533 aa12.28□□□□□ -0.44
UBXN1-216ENST00000533908 LYPD5Q6UWN5 251 aa12.28□□□□□ -0.44
UBXN1-216ENST00000533908 C9orf47Q6ZRZ4 202 aa12.28□□□□□ -0.44
UBXN1-216ENST00000533908 CHAC2Q8WUX2 184 aa12.28□□□□□ -0.44
UBXN1-216ENST00000533908 ST6GAL2Q96JF0 529 aa12.28□□□□□ -0.44
UBXN1-216ENST00000533908 VGLL1Q99990 258 aa12.28□□□□□ -0.44
UBXN1-216ENST00000533908 SEC22CQ9BRL7 303 aa12.28□□□□□ -0.44
UBXN1-216ENST00000533908 C20orf85Q9H1P6 137 aa12.28□□□□□ -0.44
UBXN1-216ENST00000533908 MRPL16Q9NX20 251 aaKnown RBP12.28□□□□□ -0.44
UBXN1-216ENST00000533908 ICOSQ9Y6W8 199 aa12.28□□□□□ -0.44
UBXN1-216ENST00000533908 UBE2L5PA0A1B0GUS4 154 aa12.27□□□□□ -0.45
UBXN1-216ENST00000533908 GPX1P07203 203 aa12.27□□□□□ -0.45
UBXN1-216ENST00000533908 DNAH10OSP0CZ25 163 aa12.27□□□□□ -0.45
UBXN1-216ENST00000533908 CRYBA4P53673 196 aa12.27□□□□□ -0.45
UBXN1-216ENST00000533908 KRTAP10-1P60331 282 aa12.27□□□□□ -0.45
UBXN1-216ENST00000533908 BAXQ07812 192 aa12.27□□□□□ -0.45
UBXN1-216ENST00000533908 FHL2Q14192 279 aa12.27□□□□□ -0.45
UBXN1-216ENST00000533908 C12orf45Q8N5I9 185 aaPredicted RBP12.27□□□□□ -0.45
UBXN1-216ENST00000533908 TMEM252Q8N6L7 170 aa12.27□□□□□ -0.45
UBXN1-216ENST00000533908 BLNKQ8WV28 456 aa12.27□□□□□ -0.45
UBXN1-216ENST00000533908 PRELID1Q9Y255 219 aa12.27□□□□□ -0.45
UBXN1-216ENST00000533908 TIMM9Q9Y5J7 89 aa12.27□□□□□ -0.45
UBXN1-216ENST00000533908 C5orf51A6NDU8 294 aa12.26□□□□□ -0.45
UBXN1-216ENST00000533908 PRAF2O60831 178 aa12.26□□□□□ -0.45
UBXN1-216ENST00000533908 SULT1A1P50225 295 aa12.26□□□□□ -0.45
UBXN1-216ENST00000533908 ICAM4Q14773 271 aa12.26□□□□□ -0.45
UBXN1-216ENST00000533908 CNPY1Q3B7I2 92 aa12.26□□□□□ -0.45
UBXN1-216ENST00000533908 IBA57Q5T440 356 aaKnown RBP12.26□□□□□ -0.45
UBXN1-216ENST00000533908 FAM167A-AS1Q96KT0 104 aa12.26□□□□□ -0.45
UBXN1-216ENST00000533908 C2orf50Q96LR7 162 aa12.26□□□□□ -0.45
UBXN1-216ENST00000533908 C8orf49Q96NF6 230 aa12.26□□□□□ -0.45
UBXN1-216ENST00000533908 PRO0255Q9UI72 69 aa12.26□□□□□ -0.45
UBXN1-216ENST00000533908 TRAV6A0A075B6T7 132 aa12.25□□□□□ -0.45
UBXN1-216ENST00000533908 TCRBP04435 133 aa12.25□□□□□ -0.45
UBXN1-216ENST00000533908 INAFM2P0DMQ5 153 aa12.25□□□□□ -0.45
UBXN1-216ENST00000533908 S100A11P31949 105 aa12.25□□□□□ -0.45
UBXN1-216ENST00000533908 SLC25A2Q9BXI2 301 aa12.25□□□□□ -0.45
UBXN1-216ENST00000533908 LYRM2Q9NU23 88 aaPredicted RBP12.25□□□□□ -0.45
UBXN1-216ENST00000533908 HHLA3Q9XRX5 114 aa12.25□□□□□ -0.45
UBXN1-216ENST00000533908 IGHV1OR15-1A0A075B7D0 117 aa12.24□□□□□ -0.45
UBXN1-216ENST00000533908 A0A087WTM6 91 aa12.24□□□□□ -0.45
UBXN1-216ENST00000533908 NMBP08949 121 aa12.24□□□□□ -0.45
UBXN1-216ENST00000533908 FGF7P21781 194 aa12.24□□□□□ -0.45
UBXN1-216ENST00000533908 ERVFC1-1P60608 527 aa12.24□□□□□ -0.45
UBXN1-216ENST00000533908 RAB32Q13637 225 aa12.24□□□□□ -0.45
UBXN1-216ENST00000533908 PDE6HQ13956 83 aa12.24□□□□□ -0.45
UBXN1-216ENST00000533908 FAM122CQ6P4D5 195 aa12.24□□□□□ -0.45
UBXN1-216ENST00000533908 ZNF492Q9P255 531 aa12.24□□□□□ -0.45
UBXN1-216ENST00000533908 RGS13O14921 159 aa12.23□□□□□ -0.45
UBXN1-216ENST00000533908 LYRM1O43325 122 aa12.23□□□□□ -0.45
UBXN1-216ENST00000533908 MIR17HGQ75NE6 70 aa12.23□□□□□ -0.45
UBXN1-216ENST00000533908 S100A10P60903 97 aa12.22□□□□□ -0.45
UBXN1-216ENST00000533908 MRPL23Q16540 153 aaKnown RBP12.22□□□□□ -0.45
UBXN1-216ENST00000533908 CDPF1Q6NVV7 123 aa12.22□□□□□ -0.45
UBXN1-216ENST00000533908 Q8TAT8 98 aa12.22□□□□□ -0.45
UBXN1-216ENST00000533908 NPCDR1Q9BY65 106 aa12.22□□□□□ -0.45
UBXN1-216ENST00000533908 MRPL32Q9BYC8 188 aaKnown RBP12.22□□□□□ -0.45
UBXN1-216ENST00000533908 AAMDCQ9H7C9 122 aa12.22□□□□□ -0.45
UBXN1-216ENST00000533908 MDFICQ9P1T7 246 aa12.22□□□□□ -0.45
UBXN1-216ENST00000533908 E5RGE8 158 aa12.21□□□□□ -0.45
UBXN1-216ENST00000533908 EREGO14944 169 aa12.21□□□□□ -0.45
UBXN1-216ENST00000533908 NBEAP1P0C6P0 100 aa12.21□□□□□ -0.45
UBXN1-216ENST00000533908 SFTA3P0C7M3 94 aa12.21□□□□□ -0.45
UBXN1-216ENST00000533908 PVALBP20472 110 aaPredicted RBP12.21□□□□□ -0.45
UBXN1-216ENST00000533908 NHLH2Q02577 135 aa12.21□□□□□ -0.45
UBXN1-216ENST00000533908 TMEM78Q5T7P6 136 aa12.21□□□□□ -0.45
UBXN1-216ENST00000533908 NEGR1Q7Z3B1 354 aa12.21□□□□□ -0.45
UBXN1-216ENST00000533908 WFDC10BQ8IUB3 73 aa12.21□□□□□ -0.45
UBXN1-216ENST00000533908 NUDT15Q9NV35 164 aa12.21□□□□□ -0.45
UBXN1-216ENST00000533908 DMBT1Q9UGM3 2413 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms