RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 SPART-AS1P0CW21 52 aa8.82□□□□□ -1
SF3B2-213ENST00000533421 GCHFRP30047 84 aa8.82□□□□□ -1
SF3B2-213ENST00000533421 KIR3DS1Q14943 382 aa8.82□□□□□ -1
SF3B2-213ENST00000533421 LGALS9CQ6DKI2 356 aa8.82□□□□□ -1
SF3B2-213ENST00000533421 AMTNQ6UX39 209 aa8.82□□□□□ -1
SF3B2-213ENST00000533421 FAM213BQ8TBF2 198 aa8.82□□□□□ -1
SF3B2-213ENST00000533421 IGF2BP2-AS1Q96M15 143 aa8.82□□□□□ -1
SF3B2-213ENST00000533421 Q9H3A6 140 aa8.82□□□□□ -1
SF3B2-213ENST00000533421 A8MTW9 85 aa8.81□□□□□ -1
SF3B2-213ENST00000533421 ZNF253O75346 499 aa8.81□□□□□ -1
SF3B2-213ENST00000533421 STAG3L2P0CL84 134 aa8.81□□□□□ -1
SF3B2-213ENST00000533421 STAG3L3P0CL85 134 aa8.81□□□□□ -1
SF3B2-213ENST00000533421 GNG5P63218 68 aa8.81□□□□□ -1
SF3B2-213ENST00000533421 RRN3P1Q2M238 152 aa8.81□□□□□ -1
SF3B2-213ENST00000533421 BAP18Q8IXM2 172 aa8.81□□□□□ -1
SF3B2-213ENST00000533421 CTXND1A0A1B0GTU2 59 aa8.8□□□□□ -1
SF3B2-213ENST00000533421 IGLL5B9A064 214 aa8.8□□□□□ -1
SF3B2-213ENST00000533421 BOLA2-SMG1P6H3BVE0 249 aa8.8□□□□□ -1
SF3B2-213ENST00000533421 PRM2P04554 102 aa8.8□□□□□ -1
SF3B2-213ENST00000533421 TPT1P13693 172 aaKnown RBP8.8□□□□□ -1
SF3B2-213ENST00000533421 UBE2G2P60604 165 aa8.8□□□□□ -1
SF3B2-213ENST00000533421 FAM74A1Q5RGS3 127 aa8.8□□□□□ -1
SF3B2-213ENST00000533421 PQLC2Q6ZP29 291 aa8.8□□□□□ -1
SF3B2-213ENST00000533421 TMEM256Q8N2U0 113 aa8.8□□□□□ -1
SF3B2-213ENST00000533421 OR10J6PQ8NGY7 276 aa8.8□□□□□ -1
SF3B2-213ENST00000533421 VGLL1Q99990 258 aa8.8□□□□□ -1
SF3B2-213ENST00000533421 AAMDCQ9H7C9 122 aa8.8□□□□□ -1
SF3B2-213ENST00000533421 HYDINQ4G0P3 5121 aa8.8□□□□□ -1
SF3B2-213ENST00000533421 MAP1LC3B2A6NCE7 125 aa8.79□□□□□ -1
SF3B2-213ENST00000533421 PGPA6NDG6 321 aa8.79□□□□□ -1
SF3B2-213ENST00000533421 SEC11BP0C7V7 166 aa8.79□□□□□ -1
SF3B2-213ENST00000533421 CT45A10P0DMU9 189 aa8.79□□□□□ -1
SF3B2-213ENST00000533421 PDE6HQ13956 83 aa8.79□□□□□ -1
SF3B2-213ENST00000533421 Q6ZTC4 211 aa8.79□□□□□ -1
SF3B2-213ENST00000533421 Q8TAT8 98 aa8.79□□□□□ -1
SF3B2-213ENST00000533421 MAP1LC3BQ9GZQ8 125 aa8.79□□□□□ -1
SF3B2-213ENST00000533421 DEFB131BA0A096LNP1 70 aa8.78□□□□□ -1
SF3B2-213ENST00000533421 LOC102723971A0A1B0GUV8 181 aa8.78□□□□□ -1
SF3B2-213ENST00000533421 NPIPB6E9PJ23 425 aa8.78□□□□□ -1
SF3B2-213ENST00000533421 CXorf1O96002 111 aa8.78□□□□□ -1
SF3B2-213ENST00000533421 TSPOP30536 169 aa8.78□□□□□ -1
SF3B2-213ENST00000533421 EMP1P54849 157 aa8.78□□□□□ -1
SF3B2-213ENST00000533421 STOML3Q8TAV4 291 aa8.78□□□□□ -1
SF3B2-213ENST00000533421 SGK494Q96LW2 274 aa8.78□□□□□ -1
SF3B2-213ENST00000533421 AGPAT4-IT1Q9H0P7 198 aa8.78□□□□□ -1
SF3B2-213ENST00000533421 YTHDF2Q9Y5A9 579 aaKnown RBP8.78□□□□□ -1
SF3B2-213ENST00000533421 GGTLC3B5MD39 225 aa8.77□□□□□ -1.01
SF3B2-213ENST00000533421 CRXO43186 299 aaPredicted RBP8.77□□□□□ -1.01
SF3B2-213ENST00000533421 SLC25A5P05141 298 aaKnown RBP8.77□□□□□ -1.01
SF3B2-213ENST00000533421 SLC51BQ86UW2 128 aa8.77□□□□□ -1.01
SF3B2-213ENST00000533421 C1orf158Q8N1D5 194 aa8.77□□□□□ -1.01
SF3B2-213ENST00000533421 FAM210BQ96KR6 192 aa8.77□□□□□ -1.01
SF3B2-213ENST00000533421 C20orf144Q9BQM9 153 aa8.77□□□□□ -1.01
SF3B2-213ENST00000533421 NIPSNAP3BQ9BS92 247 aa8.77□□□□□ -1.01
SF3B2-213ENST00000533421 KRTAP17-1Q9BYP8 105 aa8.77□□□□□ -1.01
SF3B2-213ENST00000533421 OTORQ9NRC9 128 aa8.77□□□□□ -1.01
SF3B2-213ENST00000533421 CELA1Q9UNI1 258 aa8.77□□□□□ -1.01
SF3B2-213ENST00000533421 PRELID1Q9Y255 219 aa8.77□□□□□ -1.01
SF3B2-213ENST00000533421 IGHV4-4A0A075B6R2 117 aa8.76□□□□□ -1.01
SF3B2-213ENST00000533421 TRAV8-1A0A0A6YYK1 113 aa8.76□□□□□ -1.01
SF3B2-213ENST00000533421 DIRC3C9JPN6 131 aa8.76□□□□□ -1.01
SF3B2-213ENST00000533421 CDKN1BP46527 198 aa8.76□□□□□ -1.01
SF3B2-213ENST00000533421 EIF5AP63241 154 aaKnown RBP8.76□□□□□ -1.01
SF3B2-213ENST00000533421 C12orf74Q32Q52 190 aa8.76□□□□□ -1.01
SF3B2-213ENST00000533421 PRR9Q5T870 116 aa8.76□□□□□ -1.01
SF3B2-213ENST00000533421 Q6ZQT7 251 aa8.76□□□□□ -1.01
SF3B2-213ENST00000533421 GOLT1AQ6ZVE7 132 aa8.76□□□□□ -1.01
SF3B2-213ENST00000533421 SFT2D1Q8WV19 159 aa8.76□□□□□ -1.01
SF3B2-213ENST00000533421 MRPL53Q96EL3 112 aaKnown RBP8.76□□□□□ -1.01
SF3B2-213ENST00000533421 NDUFAF3Q9BU61 184 aa8.76□□□□□ -1.01
SF3B2-213ENST00000533421 DKK2Q9UBU2 259 aa8.76□□□□□ -1.01
SF3B2-213ENST00000533421 TRAV12-3A0A0B4J271 114 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 LYRM9A8MSI8 78 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 ZNF705GA8MUZ8 300 aaPredicted RBP8.75□□□□□ -1.01
SF3B2-213ENST00000533421 CSN1S1P47710 185 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 DAD1P61803 113 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 SUMO1P63165 101 aaKnown RBP8.75□□□□□ -1.01
SF3B2-213ENST00000533421 CCL20P78556 96 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 BTN1A1Q13410 526 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 FAM222AQ5U5X8 452 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 GFI1BQ5VTD9 330 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 ALKAL2Q6UX46 152 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 CMTM2Q8TAZ6 248 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 SUN5Q8TC36 379 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 LINC01587Q99440 93 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 TMEM167BQ9NRX6 74 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 APLNQ9ULZ1 77 aa8.75□□□□□ -1.01
SF3B2-213ENST00000533421 PLECQ15149 4684 aaKnown RBP8.74□□□□□ -1.01
SF3B2-213ENST00000533421 UMAD1C9J7I0 102 aa8.74□□□□□ -1.01
SF3B2-213ENST00000533421 P0DMU3 169 aa8.74□□□□□ -1.01
SF3B2-213ENST00000533421 FAM231AP0DMU4 169 aa8.74□□□□□ -1.01
SF3B2-213ENST00000533421 FAM231CP0DMU5 169 aa8.74□□□□□ -1.01
SF3B2-213ENST00000533421 HTN1P15515 57 aa8.74□□□□□ -1.01
SF3B2-213ENST00000533421 LEPP41159 167 aa8.74□□□□□ -1.01
SF3B2-213ENST00000533421 ATP5G3P48201 142 aa8.74□□□□□ -1.01
SF3B2-213ENST00000533421 TAS2R60P59551 318 aa8.74□□□□□ -1.01
SF3B2-213ENST00000533421 TMEM78Q5T7P6 136 aa8.74□□□□□ -1.01
SF3B2-213ENST00000533421 ZNF493Q6ZR52 646 aa8.74□□□□□ -1.01
SF3B2-213ENST00000533421 LYPD1Q8N2G4 141 aa8.74□□□□□ -1.01
SF3B2-213ENST00000533421 C16orf74Q96GX8 76 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms