RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 FAM90A2PQ658T7 463 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 IGFL4Q6B9Z1 124 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 LYPD1Q8N2G4 141 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 EXOC3-AS1Q8N2X6 119 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 CYB561D1Q8N8Q1 229 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 TMEM250H0YL14 139 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 ZNF253O75346 499 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 SLC25A5P05141 298 aaKnown RBP8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 MEOX2P50222 304 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 LINC00052Q96N35 136 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 MLXQ9UH92 298 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 EPDR1Q9UM22 224 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 IGKV3-7A0A075B6H7 116 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 TRAV8-2A0A0B4J237 113 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 KIR2DL5BA0A0G2JN68 375 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 KIR2DL5BA0A0G2JPC4 375 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 SCO2A0A1W2PP80 73 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 F8W036 122 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 S100A1P23297 94 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 HLA-DMBP28068 263 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 SOHLH1Q5JUK2 328 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 KIR2DL5AQ8N109 375 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 GBGT1Q8N5D6 347 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 KIR2DL5BQ8NHK3 375 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 C11orf45Q8TAV5 145 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 CMTM2Q8TAZ6 248 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 C11orf52Q96A22 123 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 SLC50A1Q9BRV3 221 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 AAMDCQ9H7C9 122 aa8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 ZNF331Q9NQX6 463 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC4-213ENST00000533149 KRBOX1C9JBD0 128 aa8.27□□□□□ -1.09
TRAPPC4-213ENST00000533149 PEX7O00628 323 aa8.27□□□□□ -1.09
TRAPPC4-213ENST00000533149 ADCYAP1P18509 176 aa8.27□□□□□ -1.09
TRAPPC4-213ENST00000533149 NANOS2P60321 138 aaKnown RBP8.27□□□□□ -1.09
TRAPPC4-213ENST00000533149 GNG5P63218 68 aa8.27□□□□□ -1.09
TRAPPC4-213ENST00000533149 C5orf17Q8NAS9 161 aa8.27□□□□□ -1.09
TRAPPC4-213ENST00000533149 RPUSD4Q96CM3 377 aaKnown RBP8.27□□□□□ -1.09
TRAPPC4-213ENST00000533149 C16orf92Q96LL3 132 aa8.27□□□□□ -1.09
TRAPPC4-213ENST00000533149 NRN1Q9NPD7 142 aa8.27□□□□□ -1.09
TRAPPC4-213ENST00000533149 APLNQ9ULZ1 77 aa8.27□□□□□ -1.09
TRAPPC4-213ENST00000533149 VPS13DQ5THJ4 4388 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 PKHD1P08F94 4074 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 M0R3E3 92 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 DNASE2O00115 360 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 SOCS3O14543 225 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 TFPI2P48307 235 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 ZNF674Q2M3X9 581 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 C10orf91Q5T1B1 145 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 TMEM61Q8N0U2 210 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 MAPKAPK5-AS1Q8N8E1 139 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 HIST1H2BAQ96A08 127 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 TCEAL7Q9BRU2 100 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 SEC11CQ9BY50 192 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 MS4A6AQ9H2W1 248 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 RPH3ALQ9UNE2 315 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 PRELID1Q9Y255 219 aa8.26□□□□□ -1.09
TRAPPC4-213ENST00000533149 ZNF727A8MUV8 499 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 ZNF705FA8MVS1 300 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 IGLL5B9A064 214 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 RTL8CO15255 209 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 CDK2AP2O75956 126 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 TCRAP04437 139 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 PRB4P10163 310 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 ID1P41134 155 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 AKR1C3P42330 323 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 CSN1S1P47710 185 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 PAFAH1B2P68402 229 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 PSG3Q16557 428 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 FAM74A3Q4VXF1 159 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 RBPMS2Q6ZRY4 209 aaKnown RBP8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 ZNF575Q86XF7 245 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 RNF182Q8N6D2 247 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 ARL6IP6Q8N6S5 226 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 DCANP1Q8TF63 244 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 C20orf173Q96LM9 149 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 LINC00479Q96M42 142 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 ATG101Q9BSB4 218 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 PARLQ9H300 379 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 CLEC5AQ9NY25 188 aa8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 CARHSP1Q9Y2V2 147 aaKnown RBP8.25□□□□□ -1.09
TRAPPC4-213ENST00000533149 TRAV34A0A0B4J273 112 aa8.24□□□□□ -1.09
TRAPPC4-213ENST00000533149 TRAV25A0A0B4J276 109 aa8.24□□□□□ -1.09
TRAPPC4-213ENST00000533149 DIRC3C9JPN6 131 aa8.24□□□□□ -1.09
TRAPPC4-213ENST00000533149 K7EQG2 157 aa8.24□□□□□ -1.09
TRAPPC4-213ENST00000533149 ISLRO14498 428 aa8.24□□□□□ -1.09
TRAPPC4-213ENST00000533149 APOC3P02656 99 aa8.24□□□□□ -1.09
TRAPPC4-213ENST00000533149 TMEM241Q24JQ0 296 aa8.24□□□□□ -1.09
TRAPPC4-213ENST00000533149 GOLT1AQ6ZVE7 132 aa8.24□□□□□ -1.09
TRAPPC4-213ENST00000533149 MRPL53Q96EL3 112 aaKnown RBP8.24□□□□□ -1.09
TRAPPC4-213ENST00000533149 SMIM7Q9BQ49 75 aa8.24□□□□□ -1.09
TRAPPC4-213ENST00000533149 DERL1Q9BUN8 251 aa8.24□□□□□ -1.09
TRAPPC4-213ENST00000533149 C11orf68Q9H3H3 251 aaKnown RBP8.24□□□□□ -1.09
TRAPPC4-213ENST00000533149 PRAC2D3DTV9 90 aa8.23□□□□□ -1.09
TRAPPC4-213ENST00000533149 TSPAN4O14817 238 aa8.23□□□□□ -1.09
TRAPPC4-213ENST00000533149 S100A9P06702 114 aaKnown RBP8.23□□□□□ -1.09
TRAPPC4-213ENST00000533149 RPL35P42766 123 aaKnown RBP8.23□□□□□ -1.09
TRAPPC4-213ENST00000533149 CNN1P51911 297 aaKnown RBP8.23□□□□□ -1.09
TRAPPC4-213ENST00000533149 TAS2R60P59551 318 aa8.23□□□□□ -1.09
TRAPPC4-213ENST00000533149 SAMD13Q5VXD3 122 aa8.23□□□□□ -1.09
TRAPPC4-213ENST00000533149 SGK494Q96LW2 274 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 807.1 ms