RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 PHYHIPLQ96FC7 376 aa13.47□□□□□ -0.25
SSH3-209ENST00000532600 SLC50A1Q9BRV3 221 aa13.47□□□□□ -0.25
SSH3-209ENST00000532600 YTHDF2Q9Y5A9 579 aaKnown RBP13.47□□□□□ -0.25
SSH3-209ENST00000532600 DNAH17Q9UFH2 4485 aa13.46□□□□□ -0.25
SSH3-209ENST00000532600 LOC102723971A0A1B0GUV8 181 aa13.46□□□□□ -0.25
SSH3-209ENST00000532600 ZNF253O75346 499 aa13.46□□□□□ -0.25
SSH3-209ENST00000532600 SEC11BP0C7V7 166 aa13.46□□□□□ -0.25
SSH3-209ENST00000532600 ARL14EPLP0DKL9 152 aa13.46□□□□□ -0.25
SSH3-209ENST00000532600 TPT1P13693 172 aaKnown RBP13.46□□□□□ -0.25
SSH3-209ENST00000532600 TAS2R45P59539 299 aa13.46□□□□□ -0.25
SSH3-209ENST00000532600 UBE2L3P68036 154 aaKnown RBP13.46□□□□□ -0.25
SSH3-209ENST00000532600 AKR1C8PQ5T2L2 129 aa13.46□□□□□ -0.25
SSH3-209ENST00000532600 EXOC3-AS1Q8N2X6 119 aa13.46□□□□□ -0.25
SSH3-209ENST00000532600 TMED6Q8WW62 240 aa13.46□□□□□ -0.25
SSH3-209ENST00000532600 ACTR3CQ9C0K3 210 aaPredicted RBP13.46□□□□□ -0.25
SSH3-209ENST00000532600 BOLA1Q9Y3E2 137 aa13.46□□□□□ -0.25
SSH3-209ENST00000532600 HBE1P02100 147 aa13.45□□□□□ -0.26
SSH3-209ENST00000532600 PDE6HQ13956 83 aa13.45□□□□□ -0.26
SSH3-209ENST00000532600 ZNF738Q8NE65 137 aa13.45□□□□□ -0.26
SSH3-209ENST00000532600 FAT2Q9NYQ8 4349 aa13.45□□□□□ -0.26
SSH3-209ENST00000532600 M0R3E3 92 aa13.44□□□□□ -0.26
SSH3-209ENST00000532600 DUSP14O95147 198 aaKnown RBP13.44□□□□□ -0.26
SSH3-209ENST00000532600 SLC51BQ86UW2 128 aa13.44□□□□□ -0.26
SSH3-209ENST00000532600 OR8A1Q8NGG7 326 aa13.44□□□□□ -0.26
SSH3-209ENST00000532600 RPUSD4Q96CM3 377 aaKnown RBP13.44□□□□□ -0.26
SSH3-209ENST00000532600 NIPSNAP3BQ9BS92 247 aa13.44□□□□□ -0.26
SSH3-209ENST00000532600 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
SSH3-209ENST00000532600 HERC2O95714 4834 aa13.43□□□□□ -0.26
SSH3-209ENST00000532600 TRAV12-2A0A075B6T6 113 aa13.43□□□□□ -0.26
SSH3-209ENST00000532600 CTXND1A0A1B0GTU2 59 aa13.43□□□□□ -0.26
SSH3-209ENST00000532600 ZNF705GA8MUZ8 300 aaPredicted RBP13.43□□□□□ -0.26
SSH3-209ENST00000532600 RRN3P1Q2M238 152 aa13.43□□□□□ -0.26
SSH3-209ENST00000532600 PQLC2Q6ZP29 291 aa13.43□□□□□ -0.26
SSH3-209ENST00000532600 SUN5Q8TC36 379 aa13.43□□□□□ -0.26
SSH3-209ENST00000532600 PLAC8L1A1L4L8 177 aa13.42□□□□□ -0.26
SSH3-209ENST00000532600 GCHFRP30047 84 aa13.42□□□□□ -0.26
SSH3-209ENST00000532600 EIF5AP63241 154 aaKnown RBP13.42□□□□□ -0.26
SSH3-209ENST00000532600 HIST1H1AQ02539 215 aaPredicted RBP13.42□□□□□ -0.26
SSH3-209ENST00000532600 ICAM4Q14773 271 aa13.42□□□□□ -0.26
SSH3-209ENST00000532600 BOLA2-SMG1P6H3BVE0 249 aa13.41□□□□□ -0.26
SSH3-209ENST00000532600 INSP01308 110 aa13.41□□□□□ -0.26
SSH3-209ENST00000532600 AZU1P20160 251 aa13.41□□□□□ -0.26
SSH3-209ENST00000532600 FGF8P55075 233 aaPredicted RBP13.41□□□□□ -0.26
SSH3-209ENST00000532600 RANP62826 216 aaKnown RBP13.41□□□□□ -0.26
SSH3-209ENST00000532600 POM121L12Q8N7R1 296 aa13.41□□□□□ -0.26
SSH3-209ENST00000532600 Q9H3A6 140 aa13.41□□□□□ -0.26
SSH3-209ENST00000532600 TMPRSS5Q9H3S3 457 aa13.41□□□□□ -0.26
SSH3-209ENST00000532600 TEX48A0A1B0GUV7 120 aa13.4□□□□□ -0.26
SSH3-209ENST00000532600 UMAD1C9J7I0 102 aa13.4□□□□□ -0.26
SSH3-209ENST00000532600 FAM213BQ8TBF2 198 aa13.4□□□□□ -0.26
SSH3-209ENST00000532600 MRPL53Q96EL3 112 aaKnown RBP13.4□□□□□ -0.26
SSH3-209ENST00000532600 TMEM208Q9BTX3 173 aa13.4□□□□□ -0.26
SSH3-209ENST00000532600 CXorf1O96002 111 aa13.39□□□□□ -0.27
SSH3-209ENST00000532600 P0DMU3 169 aa13.39□□□□□ -0.27
SSH3-209ENST00000532600 FAM231AP0DMU4 169 aa13.39□□□□□ -0.27
SSH3-209ENST00000532600 FAM231CP0DMU5 169 aa13.39□□□□□ -0.27
SSH3-209ENST00000532600 HTN3P15516 51 aa13.39□□□□□ -0.27
SSH3-209ENST00000532600 KIR3DS1Q14943 382 aa13.39□□□□□ -0.27
SSH3-209ENST00000532600 MAP1LC3B2A6NCE7 125 aa13.38□□□□□ -0.27
SSH3-209ENST00000532600 MBD3L1Q8WWY6 194 aa13.38□□□□□ -0.27
SSH3-209ENST00000532600 FAM210BQ96KR6 192 aa13.38□□□□□ -0.27
SSH3-209ENST00000532600 MAP1LC3BQ9GZQ8 125 aa13.38□□□□□ -0.27
SSH3-209ENST00000532600 PRELID1Q9Y255 219 aa13.38□□□□□ -0.27
SSH3-209ENST00000532600 KIAA1109Q2LD37 5005 aa13.37□□□□□ -0.27
SSH3-209ENST00000532600 IGKV2-40A0A087WW87 121 aaPredicted RBP13.37□□□□□ -0.27
SSH3-209ENST00000532600 IGKV2D-40P01614 121 aaPredicted RBP13.37□□□□□ -0.27
SSH3-209ENST00000532600 TSPOP30536 169 aa13.37□□□□□ -0.27
SSH3-209ENST00000532600 DAD1P61803 113 aa13.37□□□□□ -0.27
SSH3-209ENST00000532600 ERCC8Q13216 396 aa13.37□□□□□ -0.27
SSH3-209ENST00000532600 FAM74A1Q5RGS3 127 aa13.37□□□□□ -0.27
SSH3-209ENST00000532600 LYPD1Q8N2G4 141 aa13.37□□□□□ -0.27
SSH3-209ENST00000532600 AAMDCQ9H7C9 122 aa13.37□□□□□ -0.27
SSH3-209ENST00000532600 OTORQ9NRC9 128 aa13.37□□□□□ -0.27
SSH3-209ENST00000532600 NPIPB6E9PJ23 425 aa13.36□□□□□ -0.27
SSH3-209ENST00000532600 SULT1A2P50226 295 aa13.36□□□□□ -0.27
SSH3-209ENST00000532600 TMEM88Q6PEY1 159 aa13.36□□□□□ -0.27
SSH3-209ENST00000532600 DPPA3Q6W0C5 159 aa13.36□□□□□ -0.27
SSH3-209ENST00000532600 IQCF2Q8IXL9 164 aa13.36□□□□□ -0.27
SSH3-209ENST00000532600 TMEM167BQ9NRX6 74 aa13.36□□□□□ -0.27
SSH3-209ENST00000532600 A0A1B0GV50 99 aa13.35□□□□□ -0.27
SSH3-209ENST00000532600 PGPA6NDG6 321 aa13.35□□□□□ -0.27
SSH3-209ENST00000532600 GGTLC3B5MD39 225 aa13.35□□□□□ -0.27
SSH3-209ENST00000532600 CT45A10P0DMU9 189 aa13.35□□□□□ -0.27
SSH3-209ENST00000532600 SFT2D1Q8WV19 159 aa13.35□□□□□ -0.27
SSH3-209ENST00000532600 VGLL1Q99990 258 aa13.35□□□□□ -0.27
SSH3-209ENST00000532600 LYRM9A8MSI8 78 aa13.34□□□□□ -0.27
SSH3-209ENST00000532600 M0R2N4 97 aa13.34□□□□□ -0.27
SSH3-209ENST00000532600 CDKN1BP46527 198 aa13.34□□□□□ -0.27
SSH3-209ENST00000532600 GNG5P63218 68 aa13.34□□□□□ -0.27
SSH3-209ENST00000532600 EIF5AL1Q6IS14 154 aaKnown RBP13.34□□□□□ -0.27
SSH3-209ENST00000532600 OR10J6PQ8NGY7 276 aa13.34□□□□□ -0.27
SSH3-209ENST00000532600 LINC01587Q99440 93 aa13.34□□□□□ -0.27
SSH3-209ENST00000532600 AGPAT4-IT1Q9H0P7 198 aa13.34□□□□□ -0.27
SSH3-209ENST00000532600 NACAE9PAV3 2078 aa13.34□□□□□ -0.27
SSH3-209ENST00000532600 A0A1B0GVY2 172 aa13.33□□□□□ -0.28
SSH3-209ENST00000532600 RTL8CO15255 209 aa13.33□□□□□ -0.28
SSH3-209ENST00000532600 DEFB130BP0DP73 79 aa13.33□□□□□ -0.28
SSH3-209ENST00000532600 DEFB130AP0DP74 79 aa13.33□□□□□ -0.28
SSH3-209ENST00000532600 TAS2R60P59551 318 aa13.33□□□□□ -0.28
SSH3-209ENST00000532600 UBE2G2P60604 165 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms