RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 TRAV12-3A0A0B4J271 114 aa15.59■□□□□ 0.09
TRAPPC4-210ENST00000531290 SNURFLB1AK76 121 aa15.59■□□□□ 0.09
TRAPPC4-210ENST00000531290 NPIPB6E9PJ23 425 aa15.59■□□□□ 0.09
TRAPPC4-210ENST00000531290 GIPP09681 153 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC4-210ENST00000531290 ZNRF2Q8NHG8 242 aa15.59■□□□□ 0.09
TRAPPC4-210ENST00000531290 TRBV19A0A075B6N1 114 aa15.58■□□□□ 0.08
TRAPPC4-210ENST00000531290 GCSAMLQ5JQS6 135 aa15.58■□□□□ 0.08
TRAPPC4-210ENST00000531290 MRPL53Q96EL3 112 aaKnown RBP15.58■□□□□ 0.08
TRAPPC4-210ENST00000531290 MRPL32Q9BYC8 188 aaKnown RBP15.58■□□□□ 0.08
TRAPPC4-210ENST00000531290 NBDYA0A0U1RRE5 68 aa15.57■□□□□ 0.08
TRAPPC4-210ENST00000531290 GAGE12BA1L429 117 aa15.57■□□□□ 0.08
TRAPPC4-210ENST00000531290 GAGE7O76087 117 aa15.57■□□□□ 0.08
TRAPPC4-210ENST00000531290 GAGE12FP0CL80 117 aa15.57■□□□□ 0.08
TRAPPC4-210ENST00000531290 GAGE12GP0CL81 117 aa15.57■□□□□ 0.08
TRAPPC4-210ENST00000531290 GAGE12IP0CL82 117 aa15.57■□□□□ 0.08
TRAPPC4-210ENST00000531290 HIST1H1EP10412 219 aaKnown RBP15.57■□□□□ 0.08
TRAPPC4-210ENST00000531290 FFAR4Q5NUL3 377 aa15.57■□□□□ 0.08
TRAPPC4-210ENST00000531290 GNPNAT1Q96EK6 184 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC4-210ENST00000531290 PYGO2Q9BRQ0 406 aa15.57■□□□□ 0.08
TRAPPC4-210ENST00000531290 PRELID1Q9Y255 219 aa15.57■□□□□ 0.08
TRAPPC4-210ENST00000531290 LINC00588Q9Y4M8 146 aa15.57■□□□□ 0.08
TRAPPC4-210ENST00000531290 M0R3E3 92 aa15.56■□□□□ 0.08
TRAPPC4-210ENST00000531290 SLC25A5P05141 298 aaKnown RBP15.56■□□□□ 0.08
TRAPPC4-210ENST00000531290 M6PRP20645 277 aa15.56■□□□□ 0.08
TRAPPC4-210ENST00000531290 LINC00612Q8N6U2 182 aa15.56■□□□□ 0.08
TRAPPC4-210ENST00000531290 INO80EQ8NBZ0 244 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC4-210ENST00000531290 FUT9Q9Y231 359 aa15.56■□□□□ 0.08
TRAPPC4-210ENST00000531290 TRAV26-1A0A087WT03 109 aa15.55■□□□□ 0.08
TRAPPC4-210ENST00000531290 ZNF266Q14584 549 aa15.55■□□□□ 0.08
TRAPPC4-210ENST00000531290 MIR17HGQ75NE6 70 aa15.55■□□□□ 0.08
TRAPPC4-210ENST00000531290 SSX7Q7RTT5 188 aa15.55■□□□□ 0.08
TRAPPC4-210ENST00000531290 BLNKQ8WV28 456 aa15.55■□□□□ 0.08
TRAPPC4-210ENST00000531290 LINC00477Q96M19 166 aa15.55■□□□□ 0.08
TRAPPC4-210ENST00000531290 AAMDCQ9H7C9 122 aa15.55■□□□□ 0.08
TRAPPC4-210ENST00000531290 PCLOQ9Y6V0 5065 aa15.54■□□□□ 0.08
TRAPPC4-210ENST00000531290 ERCC8Q13216 396 aa15.54■□□□□ 0.08
TRAPPC4-210ENST00000531290 PDE6HQ13956 83 aa15.54■□□□□ 0.08
TRAPPC4-210ENST00000531290 C6orf223Q8N319 242 aa15.54■□□□□ 0.08
TRAPPC4-210ENST00000531290 AQP10Q96PS8 301 aa15.54■□□□□ 0.08
TRAPPC4-210ENST00000531290 OR51M1Q9H341 326 aa15.54■□□□□ 0.08
TRAPPC4-210ENST00000531290 A0A0J9YY99 117 aa15.53■□□□□ 0.08
TRAPPC4-210ENST00000531290 NDUFB4O95168 129 aa15.53■□□□□ 0.08
TRAPPC4-210ENST00000531290 PYYP10082 97 aa15.53■□□□□ 0.08
TRAPPC4-210ENST00000531290 TAS2R45P59539 299 aa15.53■□□□□ 0.08
TRAPPC4-210ENST00000531290 DAZ2Q13117 558 aaKnown RBP15.53■□□□□ 0.08
TRAPPC4-210ENST00000531290 RXFP4Q8TDU9 374 aa15.53■□□□□ 0.08
TRAPPC4-210ENST00000531290 ZNF503Q96F45 646 aa15.53■□□□□ 0.08
TRAPPC4-210ENST00000531290 SLC25A2Q9BXI2 301 aa15.53■□□□□ 0.08
TRAPPC4-210ENST00000531290 C7orf71A4D174 169 aa15.52■□□□□ 0.08
TRAPPC4-210ENST00000531290 OR7C2O60412 319 aa15.52■□□□□ 0.08
TRAPPC4-210ENST00000531290 NBEAP1P0C6P0 100 aa15.52■□□□□ 0.08
TRAPPC4-210ENST00000531290 ACOT6Q3I5F7 207 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC4-210ENST00000531290 EXOC3-AS1Q8N2X6 119 aa15.52■□□□□ 0.08
TRAPPC4-210ENST00000531290 OR2T35Q8NGX2 323 aa15.52■□□□□ 0.08
TRAPPC4-210ENST00000531290 PAXXQ9BUH6 204 aa15.52■□□□□ 0.08
TRAPPC4-210ENST00000531290 AGPAT4-IT1Q9H0P7 198 aa15.52■□□□□ 0.08
TRAPPC4-210ENST00000531290 WFDC1Q9HC57 220 aa15.52■□□□□ 0.08
TRAPPC4-210ENST00000531290 FXYD6-FXYD2A0A087WZ82 144 aa15.51■□□□□ 0.07
TRAPPC4-210ENST00000531290 A0A1W2PPV4 95 aa15.51■□□□□ 0.07
TRAPPC4-210ENST00000531290 HOXA5P20719 270 aa15.51■□□□□ 0.07
TRAPPC4-210ENST00000531290 ZNF680Q8NEM1 530 aa15.51■□□□□ 0.07
TRAPPC4-210ENST00000531290 Q9H8V8 135 aa15.51■□□□□ 0.07
TRAPPC4-210ENST00000531290 RNASE4P34096 147 aaKnown RBP15.5■□□□□ 0.07
TRAPPC4-210ENST00000531290 TNP2Q05952 138 aa15.5■□□□□ 0.07
TRAPPC4-210ENST00000531290 ICAM4Q14773 271 aa15.5■□□□□ 0.07
TRAPPC4-210ENST00000531290 KHDC3LQ587J8 217 aa15.5■□□□□ 0.07
TRAPPC4-210ENST00000531290 Q6ZTI0 123 aa15.5■□□□□ 0.07
TRAPPC4-210ENST00000531290 ZNF575Q86XF7 245 aa15.5■□□□□ 0.07
TRAPPC4-210ENST00000531290 FAM167A-AS1Q96KT0 104 aa15.5■□□□□ 0.07
TRAPPC4-210ENST00000531290 GSN-AS1Q9NRJ2 163 aa15.5■□□□□ 0.07
TRAPPC4-210ENST00000531290 TRGV2A0A075B6R0 118 aa15.49■□□□□ 0.07
TRAPPC4-210ENST00000531290 KLLNB2CW77 178 aa15.49■□□□□ 0.07
TRAPPC4-210ENST00000531290 H3BNG1 76 aa15.49■□□□□ 0.07
TRAPPC4-210ENST00000531290 GPX1P07203 203 aa15.49■□□□□ 0.07
TRAPPC4-210ENST00000531290 OR10J4P0C629 311 aa15.49■□□□□ 0.07
TRAPPC4-210ENST00000531290 CD300CQ08708 224 aa15.49■□□□□ 0.07
TRAPPC4-210ENST00000531290 Q5BKY6 102 aa15.49■□□□□ 0.07
TRAPPC4-210ENST00000531290 TMEM78Q5T7P6 136 aa15.49■□□□□ 0.07
TRAPPC4-210ENST00000531290 TMPRSS5Q9H3S3 457 aa15.49■□□□□ 0.07
TRAPPC4-210ENST00000531290 ZNF324O75467 553 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC4-210ENST00000531290 BTN1A1Q13410 526 aa15.48■□□□□ 0.07
TRAPPC4-210ENST00000531290 FAM122CQ6P4D5 195 aa15.48■□□□□ 0.07
TRAPPC4-210ENST00000531290 C9orf47Q6ZRZ4 202 aa15.48■□□□□ 0.07
TRAPPC4-210ENST00000531290 EIF4E3Q8N5X7 224 aaKnown RBP15.48■□□□□ 0.07
TRAPPC4-210ENST00000531290 HSD17B11Q8NBQ5 300 aa15.48■□□□□ 0.07
TRAPPC4-210ENST00000531290 FAM19A4Q96LR4 140 aa15.48■□□□□ 0.07
TRAPPC4-210ENST00000531290 LINC00467Q9BRT7 94 aa15.48■□□□□ 0.07
TRAPPC4-210ENST00000531290 BORCS7-ASMTA0A0B4J1R7 106 aa15.47■□□□□ 0.07
TRAPPC4-210ENST00000531290 NMBP08949 121 aa15.47■□□□□ 0.07
TRAPPC4-210ENST00000531290 UBE2L3P68036 154 aaKnown RBP15.47■□□□□ 0.07
TRAPPC4-210ENST00000531290 ANXA2RQ3ZCQ2 193 aa15.47■□□□□ 0.07
TRAPPC4-210ENST00000531290 IGKV2-40A0A087WW87 121 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC4-210ENST00000531290 TRGV1A0A0A0MS02 117 aa15.46■□□□□ 0.07
TRAPPC4-210ENST00000531290 IGKV2D-40P01614 121 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC4-210ENST00000531290 CRISP2P16562 243 aa15.46■□□□□ 0.07
TRAPPC4-210ENST00000531290 CSN1S1P47710 185 aa15.46■□□□□ 0.07
TRAPPC4-210ENST00000531290 ESRGQ1W209 222 aa15.46■□□□□ 0.07
TRAPPC4-210ENST00000531290 TTC32Q5I0X7 151 aa15.46■□□□□ 0.07
TRAPPC4-210ENST00000531290 OR10G4Q8NGN3 311 aa15.46■□□□□ 0.07
TRAPPC4-210ENST00000531290 OR10G9Q8NGN4 311 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms