RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ERCC8Q13216 396 aa10.97□□□□□ -0.65
CPSF1-205ENST00000531042 Q9H8V8 135 aa10.97□□□□□ -0.65
CPSF1-205ENST00000531042 GPN1Q9HCN4 374 aaPredicted RBP10.97□□□□□ -0.65
CPSF1-205ENST00000531042 PRELID1Q9Y255 219 aa10.97□□□□□ -0.65
CPSF1-205ENST00000531042 A0A0J9YY99 117 aa10.96□□□□□ -0.65
CPSF1-205ENST00000531042 C7orf71A4D174 169 aa10.96□□□□□ -0.65
CPSF1-205ENST00000531042 SLC25A5P05141 298 aaKnown RBP10.96□□□□□ -0.65
CPSF1-205ENST00000531042 PYYP10082 97 aa10.96□□□□□ -0.65
CPSF1-205ENST00000531042 PDE6HQ13956 83 aa10.96□□□□□ -0.65
CPSF1-205ENST00000531042 MZT2BQ6NZ67 158 aa10.96□□□□□ -0.65
CPSF1-205ENST00000531042 LINC00477Q96M19 166 aa10.96□□□□□ -0.65
CPSF1-205ENST00000531042 NPCDR1Q9BY65 106 aa10.96□□□□□ -0.65
CPSF1-205ENST00000531042 TIMM9Q9Y5J7 89 aa10.96□□□□□ -0.65
CPSF1-205ENST00000531042 ABCA13Q86UQ4 5058 aa10.95□□□□□ -0.66
CPSF1-205ENST00000531042 KLLNB2CW77 178 aa10.95□□□□□ -0.66
CPSF1-205ENST00000531042 H3BNG1 76 aa10.95□□□□□ -0.66
CPSF1-205ENST00000531042 GCSAMLQ5JQS6 135 aa10.95□□□□□ -0.66
CPSF1-205ENST00000531042 Q6ZTI0 123 aa10.95□□□□□ -0.66
CPSF1-205ENST00000531042 FAM19A4Q96LR4 140 aa10.95□□□□□ -0.66
CPSF1-205ENST00000531042 AGPAT4-IT1Q9H0P7 198 aa10.95□□□□□ -0.66
CPSF1-205ENST00000531042 TMPRSS5Q9H3S3 457 aa10.95□□□□□ -0.66
CPSF1-205ENST00000531042 ZNF324O75467 553 aaPredicted RBP10.94□□□□□ -0.66
CPSF1-205ENST00000531042 NHLH2Q02577 135 aa10.94□□□□□ -0.66
CPSF1-205ENST00000531042 CD300CQ08708 224 aa10.94□□□□□ -0.66
CPSF1-205ENST00000531042 ESRGQ1W209 222 aa10.94□□□□□ -0.66
CPSF1-205ENST00000531042 EXOC3-AS1Q8N2X6 119 aa10.94□□□□□ -0.66
CPSF1-205ENST00000531042 C11orf72Q8NBR9 251 aa10.94□□□□□ -0.66
CPSF1-205ENST00000531042 BLNKQ8WV28 456 aa10.94□□□□□ -0.66
CPSF1-205ENST00000531042 LINC00467Q9BRT7 94 aa10.94□□□□□ -0.66
CPSF1-205ENST00000531042 SLC25A2Q9BXI2 301 aa10.94□□□□□ -0.66
CPSF1-205ENST00000531042 BTN1A1Q13410 526 aa10.93□□□□□ -0.66
CPSF1-205ENST00000531042 ANXA2RQ3ZCQ2 193 aa10.93□□□□□ -0.66
CPSF1-205ENST00000531042 C9orf47Q6ZRZ4 202 aa10.93□□□□□ -0.66
CPSF1-205ENST00000531042 ZNF680Q8NEM1 530 aa10.93□□□□□ -0.66
CPSF1-205ENST00000531042 OR5C1Q8NGR4 320 aa10.93□□□□□ -0.66
CPSF1-205ENST00000531042 THAP6Q8TBB0 222 aa10.93□□□□□ -0.66
CPSF1-205ENST00000531042 FAM167A-AS1Q96KT0 104 aa10.93□□□□□ -0.66
CPSF1-205ENST00000531042 C18orf15Q96N68 181 aa10.93□□□□□ -0.66
CPSF1-205ENST00000531042 UPK3BQ9BT76 320 aa10.93□□□□□ -0.66
CPSF1-205ENST00000531042 AAMDCQ9H7C9 122 aa10.93□□□□□ -0.66
CPSF1-205ENST00000531042 GSN-AS1Q9NRJ2 163 aa10.93□□□□□ -0.66
CPSF1-205ENST00000531042 C16orf90A8MZG2 172 aa10.92□□□□□ -0.66
CPSF1-205ENST00000531042 SIX6O95475 246 aa10.92□□□□□ -0.66
CPSF1-205ENST00000531042 CRISP2P16562 243 aa10.92□□□□□ -0.66
CPSF1-205ENST00000531042 RNASE4P34096 147 aaKnown RBP10.92□□□□□ -0.66
CPSF1-205ENST00000531042 ICAM4Q14773 271 aa10.92□□□□□ -0.66
CPSF1-205ENST00000531042 TTC32Q5I0X7 151 aa10.92□□□□□ -0.66
CPSF1-205ENST00000531042 MIR17HGQ75NE6 70 aa10.92□□□□□ -0.66
CPSF1-205ENST00000531042 EIF4E3Q8N5X7 224 aaKnown RBP10.92□□□□□ -0.66
CPSF1-205ENST00000531042 KRTAP1-5Q9BYS1 174 aa10.92□□□□□ -0.66
CPSF1-205ENST00000531042 SLC25A31Q9H0C2 315 aa10.92□□□□□ -0.66
CPSF1-205ENST00000531042 Q9H3A6 140 aa10.92□□□□□ -0.66
CPSF1-205ENST00000531042 TRGV2A0A075B6R0 118 aa10.91□□□□□ -0.66
CPSF1-205ENST00000531042 IGKV2-40A0A087WW87 121 aaPredicted RBP10.91□□□□□ -0.66
CPSF1-205ENST00000531042 E5RGE8 158 aa10.91□□□□□ -0.66
CPSF1-205ENST00000531042 IGKV2D-40P01614 121 aaPredicted RBP10.91□□□□□ -0.66
CPSF1-205ENST00000531042 GPX1P07203 203 aa10.91□□□□□ -0.66
CPSF1-205ENST00000531042 NMBP08949 121 aa10.91□□□□□ -0.66
CPSF1-205ENST00000531042 NBEAP1P0C6P0 100 aa10.91□□□□□ -0.66
CPSF1-205ENST00000531042 FAM122CQ6P4D5 195 aa10.91□□□□□ -0.66
CPSF1-205ENST00000531042 VSIG2Q96IQ7 327 aa10.91□□□□□ -0.66
CPSF1-205ENST00000531042 OR51M1Q9H341 326 aa10.91□□□□□ -0.66
CPSF1-205ENST00000531042 OR5AC2Q9NZP5 309 aa10.91□□□□□ -0.66
CPSF1-205ENST00000531042 MRPS16Q9Y3D3 137 aaKnown RBP10.91□□□□□ -0.66
CPSF1-205ENST00000531042 HSPG2P98160 4391 aa10.91□□□□□ -0.66
CPSF1-205ENST00000531042 A0A096LPF7 62 aa10.9□□□□□ -0.66
CPSF1-205ENST00000531042 TRGV1A0A0A0MS02 117 aa10.9□□□□□ -0.66
CPSF1-205ENST00000531042 SPINK4O60575 86 aa10.9□□□□□ -0.66
CPSF1-205ENST00000531042 TCL1AP56279 114 aa10.9□□□□□ -0.66
CPSF1-205ENST00000531042 TMEM78Q5T7P6 136 aa10.9□□□□□ -0.66
CPSF1-205ENST00000531042 ZFAND2AQ8N6M9 145 aa10.9□□□□□ -0.66
CPSF1-205ENST00000531042 ENKURQ8TC29 256 aa10.9□□□□□ -0.66
CPSF1-205ENST00000531042 VGLL1Q99990 258 aa10.9□□□□□ -0.66
CPSF1-205ENST00000531042 KRTAP4-5Q9BYR2 181 aa10.9□□□□□ -0.66
CPSF1-205ENST00000531042 NMES1Q9C002 83 aa10.9□□□□□ -0.66
CPSF1-205ENST00000531042 FUT9Q9Y231 359 aa10.9□□□□□ -0.66
CPSF1-205ENST00000531042 KLF12Q9Y4X4 402 aa10.9□□□□□ -0.66
CPSF1-205ENST00000531042 LRP1BQ9NZR2 4599 aa10.9□□□□□ -0.67
CPSF1-205ENST00000531042 A0A1W2PPQ1 181 aa10.89□□□□□ -0.67
CPSF1-205ENST00000531042 H0YIZ8 118 aa10.89□□□□□ -0.67
CPSF1-205ENST00000531042 CDK2AP2O75956 126 aa10.89□□□□□ -0.67
CPSF1-205ENST00000531042 LRRC37A5PQ49AS3 106 aa10.89□□□□□ -0.67
CPSF1-205ENST00000531042 PRR9Q5T870 116 aa10.89□□□□□ -0.67
CPSF1-205ENST00000531042 FXYD5Q96DB9 178 aa10.89□□□□□ -0.67
CPSF1-205ENST00000531042 MRPL32Q9BYC8 188 aaKnown RBP10.89□□□□□ -0.67
CPSF1-205ENST00000531042 WDR61Q9GZS3 305 aaKnown RBP10.89□□□□□ -0.67
CPSF1-205ENST00000531042 ZNF492Q9P255 531 aa10.89□□□□□ -0.67
CPSF1-205ENST00000531042 RGS13O14921 159 aa10.88□□□□□ -0.67
CPSF1-205ENST00000531042 OR10J4P0C629 311 aa10.88□□□□□ -0.67
CPSF1-205ENST00000531042 IBA57Q5T440 356 aaKnown RBP10.88□□□□□ -0.67
CPSF1-205ENST00000531042 Q6ZQT7 251 aa10.88□□□□□ -0.67
CPSF1-205ENST00000531042 PAXXQ9BUH6 204 aa10.88□□□□□ -0.67
CPSF1-205ENST00000531042 KCNIP2Q9NS61 270 aa10.88□□□□□ -0.67
CPSF1-205ENST00000531042 TP53TG3Q9ULZ0 132 aa10.88□□□□□ -0.67
CPSF1-205ENST00000531042 IGHV1OR15-1A0A075B7D0 117 aa10.87□□□□□ -0.67
CPSF1-205ENST00000531042 CYCSP99999 105 aaKnown RBP10.87□□□□□ -0.67
CPSF1-205ENST00000531042 PHYHIPLQ96FC7 376 aa10.87□□□□□ -0.67
CPSF1-205ENST00000531042 TRBV7-9A0A0J9YWB2 115 aa10.86□□□□□ -0.67
CPSF1-205ENST00000531042 C17orf112F2Z3M2 114 aa10.86□□□□□ -0.67
CPSF1-205ENST00000531042 PRAF2O60831 178 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms