RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 GOLT1AQ6ZVE7 132 aa12.39□□□□□ -0.43
SF3B2-211ENST00000531041 HIST1H2BAQ96A08 127 aa12.39□□□□□ -0.43
SF3B2-211ENST00000531041 TXNDC17Q9BRA2 123 aa12.39□□□□□ -0.43
SF3B2-211ENST00000531041 C1QTNF4Q9BXJ3 329 aa12.39□□□□□ -0.43
SF3B2-211ENST00000531041 C11orf94C9JXX5 98 aa12.38□□□□□ -0.43
SF3B2-211ENST00000531041 K7EQM0 130 aa12.38□□□□□ -0.43
SF3B2-211ENST00000531041 NMBP08949 121 aa12.38□□□□□ -0.43
SF3B2-211ENST00000531041 TAGLN2P37802 199 aaKnown RBP12.38□□□□□ -0.43
SF3B2-211ENST00000531041 Q6ZWC4 215 aa12.38□□□□□ -0.43
SF3B2-211ENST00000531041 ZNF767PQ75MW2 155 aa12.38□□□□□ -0.43
SF3B2-211ENST00000531041 CYB561D1Q8N8Q1 229 aa12.38□□□□□ -0.43
SF3B2-211ENST00000531041 PPP1R14DQ9NXH3 145 aa12.38□□□□□ -0.43
SF3B2-211ENST00000531041 ZNF492Q9P255 531 aa12.38□□□□□ -0.43
SF3B2-211ENST00000531041 NBEAL2Q6ZNJ1 2754 aa12.38□□□□□ -0.43
SF3B2-211ENST00000531041 F6UZH7 168 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 PEX7O00628 323 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 AMBPP02760 352 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 BCL2P10415 239 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 ZNF138P52744 262 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 ASCL2Q99929 193 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 TM2D3Q9BRN9 247 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 LENEPQ9Y5L5 61 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 COL7A1Q02388 2944 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 TRBV7-9A0A0J9YWB2 115 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 TSPOP30536 169 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 CDKN1BP46527 198 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 FXYD7P58549 80 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 MEF2BQ02080 365 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-211ENST00000531041 SPINK13Q1W4C9 94 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 CSNK1G2-AS1Q8NCQ2 148 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 PCNPQ8WW12 178 aaKnown RBP12.37□□□□□ -0.43
SF3B2-211ENST00000531041 FAM19A4Q96LR4 140 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 XCL2Q9UBD3 114 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 VAX2Q9UIW0 290 aa12.37□□□□□ -0.43
SF3B2-211ENST00000531041 TRAV8-1A0A0A6YYK1 113 aa12.36□□□□□ -0.43
SF3B2-211ENST00000531041 FBLL1A6NHQ2 334 aaKnown RBP12.36□□□□□ -0.43
SF3B2-211ENST00000531041 M0R2Z0 102 aa12.36□□□□□ -0.43
SF3B2-211ENST00000531041 TMEM75Q8N9X5 138 aa12.36□□□□□ -0.43
SF3B2-211ENST00000531041 TP53TG1Q9Y2A0 90 aa12.36□□□□□ -0.43
SF3B2-211ENST00000531041 LOC102723971A0A1B0GUV8 181 aa12.35□□□□□ -0.43
SF3B2-211ENST00000531041 CRXO43186 299 aaPredicted RBP12.35□□□□□ -0.43
SF3B2-211ENST00000531041 IGLV2-11P01706 119 aa12.35□□□□□ -0.43
SF3B2-211ENST00000531041 NHLRC4P0CG21 123 aaPredicted RBP12.35□□□□□ -0.43
SF3B2-211ENST00000531041 CRISP2P16562 243 aa12.35□□□□□ -0.43
SF3B2-211ENST00000531041 LEPP41159 167 aa12.35□□□□□ -0.43
SF3B2-211ENST00000531041 DEFB135Q30KP9 77 aa12.35□□□□□ -0.43
SF3B2-211ENST00000531041 Q8TAT8 98 aa12.35□□□□□ -0.43
SF3B2-211ENST00000531041 IGF2BP2-AS1Q96M15 143 aa12.35□□□□□ -0.43
SF3B2-211ENST00000531041 SPATA25Q9BR10 227 aa12.35□□□□□ -0.43
SF3B2-211ENST00000531041 PRKDCP78527 4128 aaKnown RBP12.35□□□□□ -0.43
SF3B2-211ENST00000531041 RBFOX3A6NFN3 312 aa12.34□□□□□ -0.43
SF3B2-211ENST00000531041 PDE6DO43924 150 aa12.34□□□□□ -0.43
SF3B2-211ENST00000531041 RAB14P61106 215 aa12.34□□□□□ -0.43
SF3B2-211ENST00000531041 FLI1Q01543 452 aaPredicted RBP12.34□□□□□ -0.43
SF3B2-211ENST00000531041 RNF183Q96D59 192 aa12.34□□□□□ -0.43
SF3B2-211ENST00000531041 LINC00479Q96M42 142 aa12.34□□□□□ -0.43
SF3B2-211ENST00000531041 RCHY1Q96PM5 261 aa12.34□□□□□ -0.43
SF3B2-211ENST00000531041 KLF12Q9Y4X4 402 aa12.34□□□□□ -0.43
SF3B2-211ENST00000531041 SCO2A0A1W2PP80 73 aa12.33□□□□□ -0.44
SF3B2-211ENST00000531041 KLLNB2CW77 178 aa12.33□□□□□ -0.44
SF3B2-211ENST00000531041 SPRY2O43597 315 aa12.33□□□□□ -0.44
SF3B2-211ENST00000531041 ZNF506Q5JVG8 444 aa12.33□□□□□ -0.44
SF3B2-211ENST00000531041 ZFAND2AQ8N6M9 145 aa12.33□□□□□ -0.44
SF3B2-211ENST00000531041 C2CD4CQ8TF44 421 aa12.33□□□□□ -0.44
SF3B2-211ENST00000531041 C11orf52Q96A22 123 aa12.33□□□□□ -0.44
SF3B2-211ENST00000531041 SGK494Q96LW2 274 aa12.33□□□□□ -0.44
SF3B2-211ENST00000531041 FAM210AQ96ND0 272 aa12.33□□□□□ -0.44
SF3B2-211ENST00000531041 RARRES2Q99969 163 aa12.33□□□□□ -0.44
SF3B2-211ENST00000531041 ZMAT4Q9H898 229 aa12.33□□□□□ -0.44
SF3B2-211ENST00000531041 PSG8Q9UQ74 426 aa12.33□□□□□ -0.44
SF3B2-211ENST00000531041 TRAV12-2A0A075B6T6 113 aa12.32□□□□□ -0.44
SF3B2-211ENST00000531041 TRAV34A0A0B4J273 112 aa12.32□□□□□ -0.44
SF3B2-211ENST00000531041 CLLU1Q5K131 121 aa12.32□□□□□ -0.44
SF3B2-211ENST00000531041 FMC1Q96HJ9 113 aa12.32□□□□□ -0.44
SF3B2-211ENST00000531041 OVOL2Q9BRP0 275 aa12.32□□□□□ -0.44
SF3B2-211ENST00000531041 TRBV6-1A0A0K0K1D8 114 aa12.31□□□□□ -0.44
SF3B2-211ENST00000531041 NDUFS6O75380 124 aaKnown RBP12.31□□□□□ -0.44
SF3B2-211ENST00000531041 INSP01308 110 aa12.31□□□□□ -0.44
SF3B2-211ENST00000531041 S100A9P06702 114 aaKnown RBP12.31□□□□□ -0.44
SF3B2-211ENST00000531041 GPX1P07203 203 aa12.31□□□□□ -0.44
SF3B2-211ENST00000531041 AKR1C3P42330 323 aa12.31□□□□□ -0.44
SF3B2-211ENST00000531041 KIR3DS1Q14943 382 aa12.31□□□□□ -0.44
SF3B2-211ENST00000531041 TMEM183BQ1AE95 376 aa12.31□□□□□ -0.44
SF3B2-211ENST00000531041 GFI1BQ5VTD9 330 aa12.31□□□□□ -0.44
SF3B2-211ENST00000531041 TVP23CQ96ET8 276 aa12.31□□□□□ -0.44
SF3B2-211ENST00000531041 C20orf144Q9BQM9 153 aa12.31□□□□□ -0.44
SF3B2-211ENST00000531041 TENM3Q9P273 2699 aa12.31□□□□□ -0.44
SF3B2-211ENST00000531041 UBE2G1P62253 170 aa12.3□□□□□ -0.44
SF3B2-211ENST00000531041 TOR2AQ5JU69 321 aa12.3□□□□□ -0.44
SF3B2-211ENST00000531041 SAPCD1Q5SSQ6 148 aa12.3□□□□□ -0.44
SF3B2-211ENST00000531041 ZNF705AQ6ZN79 300 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-211ENST00000531041 PRNTQ86SH4 94 aa12.3□□□□□ -0.44
SF3B2-211ENST00000531041 NDFIP1Q9BT67 221 aa12.3□□□□□ -0.44
SF3B2-211ENST00000531041 EIF5A2Q9GZV4 153 aaKnown RBP12.3□□□□□ -0.44
SF3B2-211ENST00000531041 RETNQ9HD89 108 aa12.3□□□□□ -0.44
SF3B2-211ENST00000531041 TREM1Q9NP99 234 aa12.3□□□□□ -0.44
SF3B2-211ENST00000531041 C7orf71A4D174 169 aa12.29□□□□□ -0.44
SF3B2-211ENST00000531041 J3KRW8 73 aa12.29□□□□□ -0.44
SF3B2-211ENST00000531041 Q86TA4 180 aa12.29□□□□□ -0.44
SF3B2-211ENST00000531041 C1orf158Q8N1D5 194 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms