RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 CLEC19AQ6UXS0 136 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 LINC00322Q6ZN03 302 aaPredicted RBP4.28□□□□□ -1.72
PCF11-205ENST00000530906 TEX43Q6ZNM6 134 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 Q6ZSN1 163 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 GTSF1Q8WW33 167 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 C17orf77Q96MU5 243 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 C20orf144Q9BQM9 153 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 LAMA5O15230 3695 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 ITPR1Q14643 2758 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 CACNA1BQ00975 2339 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 A0A096LNT2 108 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 LOC102724200A0A096LPH7 203 aaPredicted RBP4.27□□□□□ -1.73
PCF11-205ENST00000530906 KIR2DL5BA0A0G2JN68 375 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 KIR2DL5BA0A0G2JPC4 375 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 C20orf202A1L168 122 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 CLPSL1A2RUU4 121 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 TMEM189A5PLL7 270 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 FABP5P3A8MUU1 101 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 K7EMT4 169 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 M0R3E3 92 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 SPINK4O60575 86 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 SH2D1AO60880 128 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 IGHG4P01861 327 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 PPBPP02775 128 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 IGHV4-38-2P0DP08 117 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 CAMPP49913 170 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 SLC35B1P78383 322 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 TMEM78Q5T7P6 136 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 LCN12Q6JVE5 192 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 BRD3OSQ6XYD6 125 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 C9orf47Q6ZRZ4 202 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 Q6ZWC4 215 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 TCF24Q7RTU0 167 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 TMEM219Q86XT9 240 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 KIR2DL5AQ8N109 375 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 ZNF843Q8N446 348 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 GLMPQ8WWB7 406 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 PGLYRP4Q96LB8 373 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 CNFNQ9BYD5 112 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 NRN1Q9NPD7 142 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 LAMTOR2Q9Y2Q5 125 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 SMAD5-AS1Q9Y6J3 95 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 S4R3C0 116 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 ACACBO00763 2458 aa4.27□□□□□ -1.73
PCF11-205ENST00000530906 KALRNO60229 2985 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 ABCA2Q9BZC7 2435 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.26□□□□□ -1.733e-6■■■■□ 23.1
PCF11-205ENST00000530906 OVOL1O14753 267 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 NUPR1O60356 82 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 IGHV3-23P01764 117 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 SNRPCP09234 159 aaKnown RBP4.26□□□□□ -1.73
PCF11-205ENST00000530906 FRMD6-AS1P0C7T7 363 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 IGLC6P0CF74 106 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 ZNF138P52744 262 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 CFHR3Q02985 330 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 KIAA1644Q3SXP7 199 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 FAM106AQ4KMX7 169 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 C9orf152Q5JTZ5 239 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 GDF5OSQ5U4N7 250 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 KLHDC1Q8N7A1 406 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 SGK494Q96LW2 274 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 LINC00477Q96M19 166 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 NDUFAF3Q9BU61 184 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 NPFFR1Q9GZQ6 430 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 C11orf21Q9P2W6 132 aa4.26□□□□□ -1.73
PCF11-205ENST00000530906 IGKV2-40A0A087WW87 121 aaPredicted RBP4.25□□□□□ -1.73
PCF11-205ENST00000530906 LINC01548A6NM66 108 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 ZNF705FA8MVS1 300 aaPredicted RBP4.25□□□□□ -1.73
PCF11-205ENST00000530906 M0R2Z0 102 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 CRXO43186 299 aaPredicted RBP4.25□□□□□ -1.73
PCF11-205ENST00000530906 IGKV2D-40P01614 121 aaPredicted RBP4.25□□□□□ -1.73
PCF11-205ENST00000530906 ELANEP08246 267 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 ARMS2P0C7Q2 107 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 LINC00614P0C842 121 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 ZNF705DP0CH99 300 aaPredicted RBP4.25□□□□□ -1.73
PCF11-205ENST00000530906 ZNF705BP0CI00 300 aaPredicted RBP4.25□□□□□ -1.73
PCF11-205ENST00000530906 PF4V1P10720 104 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 BTF3P20290 206 aaKnown RBP4.25□□□□□ -1.73
PCF11-205ENST00000530906 CRIP1P50238 77 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 RNF151Q2KHN1 245 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 PSMG4Q5JS54 123 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 FAM104BQ5XKR9 115 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 GPHB5Q86YW7 130 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 LURAP1LQ8IV03 231 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 BCL6BQ8N143 479 aaPredicted RBP4.25□□□□□ -1.73
PCF11-205ENST00000530906 ZNF664Q8N3J9 261 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 FER1L6-AS1Q8NA97 138 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 RCHY1Q96PM5 261 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 VAMP8Q9BV40 100 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 TMEM191AQ9H0A3 160 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 DAZ1Q9NQZ3 744 aaKnown RBP4.25□□□□□ -1.73
PCF11-205ENST00000530906 HSPB8Q9UJY1 196 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 VPREB3Q9UKI3 123 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 UFC1Q9Y3C8 167 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 U3KQK5 164 aa4.25□□□□□ -1.73
PCF11-205ENST00000530906 IGSF10Q6WRI0 2623 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 IGHV4-4A0A075B6R2 117 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 IGHV3OR16-10A0A075B7F0 116 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 TRAV8-2A0A0B4J237 113 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms