RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 CCL20P78556 96 aa15.5■□□□□ 0.07
CAPN1-220ENST00000530567 FAM19A4Q96LR4 140 aa15.5■□□□□ 0.07
CAPN1-220ENST00000530567 LINC00477Q96M19 166 aa15.5■□□□□ 0.07
CAPN1-220ENST00000530567 RPH3ALQ9UNE2 315 aa15.5■□□□□ 0.07
CAPN1-220ENST00000530567 KIR3DS1Q14943 382 aa15.49■□□□□ 0.07
CAPN1-220ENST00000530567 ARL2-SNX15V9GYD0 113 aa15.49■□□□□ 0.07
CAPN1-220ENST00000530567 ZNF705EA8MWA4 302 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-220ENST00000530567 AMBPP02760 352 aa15.48■□□□□ 0.07
CAPN1-220ENST00000530567 GOLT1AQ6ZVE7 132 aa15.48■□□□□ 0.07
CAPN1-220ENST00000530567 IGF2BP2-AS1Q96M15 143 aa15.48■□□□□ 0.07
CAPN1-220ENST00000530567 PPP1R14DQ9NXH3 145 aa15.48■□□□□ 0.07
CAPN1-220ENST00000530567 TRAV12-2A0A075B6T6 113 aa15.47■□□□□ 0.07
CAPN1-220ENST00000530567 TCRAP04437 139 aa15.47■□□□□ 0.07
CAPN1-220ENST00000530567 CDKN1BP46527 198 aa15.47■□□□□ 0.07
CAPN1-220ENST00000530567 ZNF705AQ6ZN79 300 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-220ENST00000530567 CCDC28AQ8IWP9 274 aa15.47■□□□□ 0.07
CAPN1-220ENST00000530567 C1orf158Q8N1D5 194 aa15.47■□□□□ 0.07
CAPN1-220ENST00000530567 Q8TAT8 98 aa15.47■□□□□ 0.07
CAPN1-220ENST00000530567 ZNF492Q9P255 531 aa15.47■□□□□ 0.07
CAPN1-220ENST00000530567 EPDR1Q9UM22 224 aa15.47■□□□□ 0.07
CAPN1-220ENST00000530567 PAGE4O60829 102 aa15.46■□□□□ 0.07
CAPN1-220ENST00000530567 RBMY1A1P0DJD3 496 aaKnown RBP15.46■□□□□ 0.07
CAPN1-220ENST00000530567 RBMY1CP0DJD4 496 aa15.46■□□□□ 0.07
CAPN1-220ENST00000530567 ZNF138P52744 262 aa15.46■□□□□ 0.07
CAPN1-220ENST00000530567 RBMY1FQ15415 496 aaKnown RBP15.46■□□□□ 0.07
CAPN1-220ENST00000530567 TMEM78Q5T7P6 136 aa15.46■□□□□ 0.07
CAPN1-220ENST00000530567 OR11H2Q8NH07 326 aa15.46■□□□□ 0.07
CAPN1-220ENST00000530567 X6R8D5 127 aa15.46■□□□□ 0.07
CAPN1-220ENST00000530567 TRAV8-1A0A0A6YYK1 113 aa15.45■□□□□ 0.06
CAPN1-220ENST00000530567 HBE1P02100 147 aa15.45■□□□□ 0.06
CAPN1-220ENST00000530567 ATP5G3P48201 142 aa15.45■□□□□ 0.06
CAPN1-220ENST00000530567 RARRES2Q99969 163 aa15.45■□□□□ 0.06
CAPN1-220ENST00000530567 NKX6-2Q9C056 277 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-220ENST00000530567 INSP01308 110 aa15.44■□□□□ 0.06
CAPN1-220ENST00000530567 CRISP2P16562 243 aa15.44■□□□□ 0.06
CAPN1-220ENST00000530567 TSPOP30536 169 aa15.44■□□□□ 0.06
CAPN1-220ENST00000530567 LEPP41159 167 aa15.44■□□□□ 0.06
CAPN1-220ENST00000530567 GFI1BQ5VTD9 330 aa15.44■□□□□ 0.06
CAPN1-220ENST00000530567 ZFAND2AQ8N6M9 145 aa15.44■□□□□ 0.06
CAPN1-220ENST00000530567 ATG101Q9BSB4 218 aa15.44■□□□□ 0.06
CAPN1-220ENST00000530567 SERTM2A0A1B0GWG4 89 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 KLLNB2CW77 178 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 IGLV2-11P01706 119 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 PPT1P50897 306 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 CST9LP1Q5W188 147 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 TRBV7-9A0A0J9YWB2 115 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 IFNA7P01567 189 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 PRR9Q5T870 116 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 TEX261Q6UWH6 196 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 CYB561D1Q8N8Q1 229 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 EDA2RQ9HAV5 297 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 GNG13Q9P2W3 67 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 GOLT1BQ9Y3E0 138 aa15.43■□□□□ 0.06
CAPN1-220ENST00000530567 TEX46H3BTG2 121 aa15.42■□□□□ 0.06
CAPN1-220ENST00000530567 J3KRW8 73 aa15.42■□□□□ 0.06
CAPN1-220ENST00000530567 PEX7O00628 323 aa15.42■□□□□ 0.06
CAPN1-220ENST00000530567 NMBP08949 121 aa15.42■□□□□ 0.06
CAPN1-220ENST00000530567 Q8NAQ8 132 aa15.42■□□□□ 0.06
CAPN1-220ENST00000530567 LYPD6BQ8NI32 183 aa15.42■□□□□ 0.06
CAPN1-220ENST00000530567 TVP23CQ96ET8 276 aa15.42■□□□□ 0.06
CAPN1-220ENST00000530567 SGK494Q96LW2 274 aa15.42■□□□□ 0.06
CAPN1-220ENST00000530567 MANBALQ9NQG1 85 aa15.42■□□□□ 0.06
CAPN1-220ENST00000530567 IGHV3OR16-12A0A075B7B8 117 aa15.41■□□□□ 0.06
CAPN1-220ENST00000530567 BLOC1S1P78537 153 aa15.41■□□□□ 0.06
CAPN1-220ENST00000530567 PMS2P11Q13670 270 aa15.41■□□□□ 0.06
CAPN1-220ENST00000530567 ZNF680Q8NEM1 530 aa15.41■□□□□ 0.06
CAPN1-220ENST00000530567 LINC00479Q96M42 142 aa15.41■□□□□ 0.06
CAPN1-220ENST00000530567 NEU1Q99519 415 aa15.41■□□□□ 0.06
CAPN1-220ENST00000530567 TCEAL7Q9BRU2 100 aa15.41■□□□□ 0.06
CAPN1-220ENST00000530567 LENEPQ9Y5L5 61 aa15.41■□□□□ 0.06
CAPN1-220ENST00000530567 BTN1A1Q13410 526 aa15.4■□□□□ 0.06
CAPN1-220ENST00000530567 TMEM75Q8N9X5 138 aa15.4■□□□□ 0.06
CAPN1-220ENST00000530567 HIST1H2BAQ96A08 127 aa15.4■□□□□ 0.06
CAPN1-220ENST00000530567 IGHV4-28A0A0C4DH34 117 aa15.39■□□□□ 0.05
CAPN1-220ENST00000530567 MIFP14174 115 aa15.39■□□□□ 0.05
CAPN1-220ENST00000530567 C20orf144Q9BQM9 153 aa15.39■□□□□ 0.05
CAPN1-220ENST00000530567 PSG8Q9UQ74 426 aa15.39■□□□□ 0.05
CAPN1-220ENST00000530567 TRAV34A0A0B4J273 112 aa15.38■□□□□ 0.05
CAPN1-220ENST00000530567 A0A0J9YWU9 116 aa15.38■□□□□ 0.05
CAPN1-220ENST00000530567 C7orf71A4D174 169 aa15.38■□□□□ 0.05
CAPN1-220ENST00000530567 C11orf94C9JXX5 98 aa15.38■□□□□ 0.05
CAPN1-220ENST00000530567 K7EQM0 130 aa15.38■□□□□ 0.05
CAPN1-220ENST00000530567 TRAV12-3A0A0B4J271 114 aa15.37■□□□□ 0.05
CAPN1-220ENST00000530567 SCO2A0A1W2PP80 73 aa15.37■□□□□ 0.05
CAPN1-220ENST00000530567 PRM2P04554 102 aa15.37■□□□□ 0.05
CAPN1-220ENST00000530567 FLI1Q01543 452 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-220ENST00000530567 Q6ZQT7 251 aa15.37■□□□□ 0.05
CAPN1-220ENST00000530567 TMEM256Q8N2U0 113 aa15.37■□□□□ 0.05
CAPN1-220ENST00000530567 C11orf68Q9H3H3 251 aaKnown RBP15.37■□□□□ 0.05
CAPN1-220ENST00000530567 DEFB4AO15263 64 aa15.36■□□□□ 0.05
CAPN1-220ENST00000530567 ZNF324O75467 553 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-220ENST00000530567 GPX1P07203 203 aa15.36■□□□□ 0.05
CAPN1-220ENST00000530567 BCL2P10415 239 aa15.36■□□□□ 0.05
CAPN1-220ENST00000530567 RNASE4P34096 147 aaKnown RBP15.36■□□□□ 0.05
CAPN1-220ENST00000530567 C2CD4CQ8TF44 421 aa15.36■□□□□ 0.05
CAPN1-220ENST00000530567 TMEM208Q9BTX3 173 aa15.36■□□□□ 0.05
CAPN1-220ENST00000530567 KLF12Q9Y4X4 402 aa15.36■□□□□ 0.05
CAPN1-220ENST00000530567 SMIM9A6NGZ8 99 aa15.35■□□□□ 0.05
CAPN1-220ENST00000530567 FBLL1A6NHQ2 334 aaKnown RBP15.35■□□□□ 0.05
CAPN1-220ENST00000530567 H7BYZ3 331 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms