RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 H7BYZ3 331 aa12.02□□□□□ -0.49
SF3B2-209ENST00000530322 J3KRW8 73 aa12.02□□□□□ -0.49
SF3B2-209ENST00000530322 HMGB3O15347 200 aaKnown RBP12.02□□□□□ -0.49
SF3B2-209ENST00000530322 CDC34P49427 236 aaPredicted RBP12.02□□□□□ -0.49
SF3B2-209ENST00000530322 VGLL1Q99990 258 aa12.02□□□□□ -0.49
SF3B2-209ENST00000530322 NIPSNAP3BQ9BS92 247 aa12.02□□□□□ -0.49
SF3B2-209ENST00000530322 HYDINQ4G0P3 5121 aa12.02□□□□□ -0.49
SF3B2-209ENST00000530322 DEFB131BA0A096LNP1 70 aa12.01□□□□□ -0.49
SF3B2-209ENST00000530322 IGLL5B9A064 214 aa12.01□□□□□ -0.49
SF3B2-209ENST00000530322 MBP02144 154 aa12.01□□□□□ -0.49
SF3B2-209ENST00000530322 STAG3L2P0CL84 134 aa12.01□□□□□ -0.49
SF3B2-209ENST00000530322 STAG3L3P0CL85 134 aa12.01□□□□□ -0.49
SF3B2-209ENST00000530322 ARL14EPLP0DKL9 152 aa12.01□□□□□ -0.49
SF3B2-209ENST00000530322 RAB24Q969Q5 203 aa12.01□□□□□ -0.49
SF3B2-209ENST00000530322 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
SF3B2-209ENST00000530322 TRAV12-3A0A0B4J271 114 aa12□□□□□ -0.49
SF3B2-209ENST00000530322 RBAKDNA6NC62 111 aa12□□□□□ -0.49
SF3B2-209ENST00000530322 KLLNB2CW77 178 aa12□□□□□ -0.49
SF3B2-209ENST00000530322 TAAR5O14804 337 aa12□□□□□ -0.49
SF3B2-209ENST00000530322 SLC25A5P05141 298 aaKnown RBP12□□□□□ -0.49
SF3B2-209ENST00000530322 HTN1P15515 57 aa12□□□□□ -0.49
SF3B2-209ENST00000530322 CRISP2P16562 243 aa12□□□□□ -0.49
SF3B2-209ENST00000530322 CSN1S1P47710 185 aa12□□□□□ -0.49
SF3B2-209ENST00000530322 TCTAP57738 103 aa12□□□□□ -0.49
SF3B2-209ENST00000530322 TMEM78Q5T7P6 136 aa12□□□□□ -0.49
SF3B2-209ENST00000530322 C16orf74Q96GX8 76 aa12□□□□□ -0.49
SF3B2-209ENST00000530322 CYTL1Q9NRR1 136 aa12□□□□□ -0.49
SF3B2-209ENST00000530322 C7orf71A4D174 169 aa11.99□□□□□ -0.49
SF3B2-209ENST00000530322 LYRM9A8MSI8 78 aa11.99□□□□□ -0.49
SF3B2-209ENST00000530322 LY6G6CO95867 125 aa11.99□□□□□ -0.49
SF3B2-209ENST00000530322 NMBP08949 121 aa11.99□□□□□ -0.49
SF3B2-209ENST00000530322 OR11H4Q8NGC9 324 aa11.99□□□□□ -0.49
SF3B2-209ENST00000530322 RNASE8Q8TDE3 154 aaKnown RBP11.99□□□□□ -0.49
SF3B2-209ENST00000530322 TMEM263Q8WUH6 116 aaKnown RBP11.99□□□□□ -0.49
SF3B2-209ENST00000530322 OTORQ9NRC9 128 aa11.99□□□□□ -0.49
SF3B2-209ENST00000530322 ZNF492Q9P255 531 aa11.99□□□□□ -0.49
SF3B2-209ENST00000530322 APLNQ9ULZ1 77 aa11.99□□□□□ -0.49
SF3B2-209ENST00000530322 IGHV4-4A0A075B6R2 117 aa11.98□□□□□ -0.49
SF3B2-209ENST00000530322 PGPA6NDG6 321 aa11.98□□□□□ -0.49
SF3B2-209ENST00000530322 DIRC3C9JPN6 131 aa11.98□□□□□ -0.49
SF3B2-209ENST00000530322 ZNF138P52744 262 aa11.98□□□□□ -0.49
SF3B2-209ENST00000530322 CD300CQ08708 224 aa11.98□□□□□ -0.49
SF3B2-209ENST00000530322 ZNF345Q14585 488 aa11.98□□□□□ -0.49
SF3B2-209ENST00000530322 ZNF493Q6ZR52 646 aa11.98□□□□□ -0.49
SF3B2-209ENST00000530322 ZFAND2AQ8N6M9 145 aa11.98□□□□□ -0.49
SF3B2-209ENST00000530322 SUN5Q8TC36 379 aa11.98□□□□□ -0.49
SF3B2-209ENST00000530322 RXFP4Q8TDU9 374 aa11.98□□□□□ -0.49
SF3B2-209ENST00000530322 ACTR3CQ9C0K3 210 aaPredicted RBP11.98□□□□□ -0.49
SF3B2-209ENST00000530322 TRBV7-9A0A0J9YWB2 115 aa11.97□□□□□ -0.49
SF3B2-209ENST00000530322 HMSDA8MTL9 139 aa11.97□□□□□ -0.49
SF3B2-209ENST00000530322 ZNF324O75467 553 aaPredicted RBP11.97□□□□□ -0.49
SF3B2-209ENST00000530322 GCHFRP30047 84 aa11.97□□□□□ -0.49
SF3B2-209ENST00000530322 DAD1P61803 113 aa11.97□□□□□ -0.49
SF3B2-209ENST00000530322 BTN1A1Q13410 526 aa11.97□□□□□ -0.49
SF3B2-209ENST00000530322 FAM74A1Q5RGS3 127 aa11.97□□□□□ -0.49
SF3B2-209ENST00000530322 LGALS9CQ6DKI2 356 aa11.97□□□□□ -0.49
SF3B2-209ENST00000530322 SSX7Q7RTT5 188 aa11.97□□□□□ -0.49
SF3B2-209ENST00000530322 KCNRGQ8N5I3 272 aa11.97□□□□□ -0.49
SF3B2-209ENST00000530322 Q8TAT8 98 aa11.97□□□□□ -0.49
SF3B2-209ENST00000530322 HYLS1Q96M11 299 aa11.97□□□□□ -0.49
SF3B2-209ENST00000530322 PYGO2Q9BRQ0 406 aa11.97□□□□□ -0.49
SF3B2-209ENST00000530322 CXorf1O96002 111 aa11.96□□□□□ -0.49
SF3B2-209ENST00000530322 GPX1P07203 203 aa11.96□□□□□ -0.49
SF3B2-209ENST00000530322 RNASE4P34096 147 aaKnown RBP11.96□□□□□ -0.49
SF3B2-209ENST00000530322 ZNF726P1Q15940 193 aa11.96□□□□□ -0.49
SF3B2-209ENST00000530322 PRR9Q5T870 116 aa11.96□□□□□ -0.49
SF3B2-209ENST00000530322 CCDC28AQ8IWP9 274 aa11.96□□□□□ -0.49
SF3B2-209ENST00000530322 ARL6IP6Q8N6S5 226 aa11.96□□□□□ -0.49
SF3B2-209ENST00000530322 CMTM2Q8TAZ6 248 aa11.96□□□□□ -0.49
SF3B2-209ENST00000530322 TIMM8BQ9Y5J9 83 aaPredicted RBP11.96□□□□□ -0.49
SF3B2-209ENST00000530322 ARPC5LQ9BPX5 153 aa11.95□□□□□ -0.5
SF3B2-209ENST00000530322 LINC00467Q9BRT7 94 aa11.95□□□□□ -0.5
SF3B2-209ENST00000530322 AKR1C8PQ5T2L2 129 aa11.94□□□□□ -0.5
SF3B2-209ENST00000530322 TMED6Q8WW62 240 aa11.94□□□□□ -0.5
SF3B2-209ENST00000530322 NOP10Q9NPE3 64 aaKnown RBP11.94□□□□□ -0.5
SF3B2-209ENST00000530322 TMEM167BQ9NRX6 74 aa11.94□□□□□ -0.5
SF3B2-209ENST00000530322 RPH3ALQ9UNE2 315 aa11.94□□□□□ -0.5
SF3B2-209ENST00000530322 LENEPQ9Y5L5 61 aa11.94□□□□□ -0.5
SF3B2-209ENST00000530322 A0A0D9SG52 128 aa11.93□□□□□ -0.5
SF3B2-209ENST00000530322 CTXND1A0A1B0GTU2 59 aa11.93□□□□□ -0.5
SF3B2-209ENST00000530322 DEFB130BP0DP73 79 aa11.93□□□□□ -0.5
SF3B2-209ENST00000530322 DEFB130AP0DP74 79 aa11.93□□□□□ -0.5
SF3B2-209ENST00000530322 HTN3P15516 51 aa11.93□□□□□ -0.5
SF3B2-209ENST00000530322 Q6ZNX1 250 aa11.93□□□□□ -0.5
SF3B2-209ENST00000530322 Q6ZQT7 251 aa11.93□□□□□ -0.5
SF3B2-209ENST00000530322 GOLT1AQ6ZVE7 132 aa11.93□□□□□ -0.5
SF3B2-209ENST00000530322 ST6GAL2Q96JF0 529 aa11.93□□□□□ -0.5
SF3B2-209ENST00000530322 NDUFAF3Q9BU61 184 aa11.93□□□□□ -0.5
SF3B2-209ENST00000530322 GNG5P63218 68 aa11.92□□□□□ -0.5
SF3B2-209ENST00000530322 FAM210BQ96KR6 192 aa11.92□□□□□ -0.5
SF3B2-209ENST00000530322 BCL2L11O43521 198 aa11.91□□□□□ -0.5
SF3B2-209ENST00000530322 ANXA2RQ3ZCQ2 193 aa11.91□□□□□ -0.5
SF3B2-209ENST00000530322 EIF4E3Q8N5X7 224 aaKnown RBP11.91□□□□□ -0.5
SF3B2-209ENST00000530322 LINC00612Q8N6U2 182 aa11.91□□□□□ -0.5
SF3B2-209ENST00000530322 C5orf17Q8NAS9 161 aa11.91□□□□□ -0.5
SF3B2-209ENST00000530322 C11orf72Q8NBR9 251 aa11.91□□□□□ -0.5
SF3B2-209ENST00000530322 TRAV8-1A0A0A6YYK1 113 aa11.9□□□□□ -0.5
SF3B2-209ENST00000530322 CBY3A6NI87 242 aa11.9□□□□□ -0.5
SF3B2-209ENST00000530322 SNURFLB1AK76 121 aa11.9□□□□□ -0.5
SF3B2-209ENST00000530322 GGTLC3B5MD39 225 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms