RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 A0A087WSZ3 146 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 TRAV1-1A0A0B4J248 108 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 LOC107986453A0A1B0GWG9 222 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 hDV103S1A0JD37 113 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 FNDC10F2Z333 226 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 ZNF737O75373 536 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 UBL3O95164 117 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 DSCR4P56555 118 aaPredicted RBP1.95□□□□□ -2.1
C11orf88-204ENST00000529661 PLGLB1Q02325 96 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 OR2T35Q8NGX2 323 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 OR4C12Q96R67 309 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 PCDH15Q96QU1 1955 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 ADGRB3O60242 1522 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 NINQ8N4C6 2090 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 AKAP11Q9UKA4 1901 aa1.95□□□□□ -2.1
C11orf88-204ENST00000529661 MRC2Q9UBG0 1479 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 KIAA1549LQ6ZVL6 1849 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 MDC1Q14676 2089 aaKnown RBP1.94□□□□□ -2.1
C11orf88-204ENST00000529661 BRWD1Q9NSI6 2320 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 IGKV2D-26A0A0A0MRZ7 120 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 TRGV4A0A0C4DH28 118 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 FAM236AA0A1B0GUQ0 79 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 FAM236BA0A1B0GV22 79 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 B4DSR2 109 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 E7EUB6 86 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 M0R233 179 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 APODP05090 189 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 SLC25A4P12235 298 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 RPL26P61254 145 aaKnown RBP1.94□□□□□ -2.1
C11orf88-204ENST00000529661 SNRPD3P62318 126 aaKnown RBP1.94□□□□□ -2.1
C11orf88-204ENST00000529661 CDK6Q00534 326 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 ZNF846Q147U1 533 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 CLEC2BQ92478 149 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 MUCL1Q96DR8 90 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 TIMM21Q9BVV7 248 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 SLC35B3Q9H1N7 401 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 COMMD3Q9UBI1 195 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 METTL1Q9UBP6 276 aaKnown RBP1.94□□□□□ -2.1
C11orf88-204ENST00000529661 RPL26L1Q9UNX3 145 aaKnown RBP1.94□□□□□ -2.1
C11orf88-204ENST00000529661 DNAJC15Q9Y5T4 150 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 TRPM7Q96QT4 1865 aa1.94□□□□□ -2.1
C11orf88-204ENST00000529661 ADGRB1O14514 1584 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 CEP192Q8TEP8 1941 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 RGS12O14924 1447 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 FGD6Q6ZV73 1430 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 FREM3P0C091 2139 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 DISP1Q96F81 1524 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 RTTNQ86VV8 2226 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 PNMA8CA0A1B0GUJ8 204 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 ATP6V1G2-DDX39BF2Z307 99 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 YPEL1O60688 119 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 TRACP01848 142 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 CRPP02741 224 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 ZNF25P17030 456 aaPredicted RBP1.93□□□□□ -2.1
C11orf88-204ENST00000529661 GUCA1AP43080 201 aaPredicted RBP1.93□□□□□ -2.1
C11orf88-204ENST00000529661 SSR2P43308 183 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 BLCAPP62952 87 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 RNASE10Q5GAN6 216 aaKnown RBP1.93□□□□□ -2.1
C11orf88-204ENST00000529661 C1orf134Q5TEV5 83 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 GLIPR1L1Q6UWM5 242 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 ATOH7Q8N100 152 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 LINC00311Q8N616 119 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 TMEM254Q8TBM7 123 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 PSMF1Q92530 271 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 SDF2Q99470 211 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 C12orf57Q99622 126 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 NABP2Q9BQ15 211 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 TCEAL7Q9BRU2 100 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 TMEM106BQ9NUM4 274 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 CCDC167Q9P0B6 97 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 GNG8Q9UK08 70 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 PTPRFP10586 1907 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 CACNA1GO43497 2377 aa1.93□□□□□ -2.1
C11orf88-204ENST00000529661 HEATR1Q9H583 2144 aaKnown RBP1.93□□□□□ -2.1
C11orf88-204ENST00000529661 MGAMO43451 1857 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 EML5Q05BV3 1969 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 RTEL1-TNFRSF6BF6WH68 1400 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 NAIPQ13075 1403 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 ALPK3Q96L96 1907 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 TRBV20-1A0A075B6N2 111 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 TRAV12-1A0A0B4J245 112 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 A0A0G2JQZ4 141 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 C9orf170A2RU37 121 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 CDC42EP2O14613 210 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 CD3DP04234 171 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 ASAH2BP0C7U1 165 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 FGF7P21781 194 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 ETV6P41212 452 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 MRPS10P82664 201 aaKnown RBP1.92□□□□□ -2.1
C11orf88-204ENST00000529661 TPRXLQ17RH7 258 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 OCIAD2Q56VL3 154 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 IZUMO2Q6UXV1 221 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 IDO2Q6ZQW0 420 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 ARPINQ7Z6K5 226 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 Q8N2B8 174 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 SAR1AQ9NR31 198 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 FKBP11Q9NYL4 201 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 MBD5Q9P267 1494 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 CUL7Q14999 1698 aa1.92□□□□□ -2.1
C11orf88-204ENST00000529661 ANK1P16157 1881 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms