RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 DHFR2Q86XF0 187 aa1.87□□□□□ -2.11
AMBRA1-208ENST00000529558 CPAMD8Q8IZJ3 1885 aa1.87□□□□□ -2.11
AMBRA1-208ENST00000529558 OR5A1Q8NGJ0 315 aa1.87□□□□□ -2.11
AMBRA1-208ENST00000529558 ISOC1Q96CN7 298 aa1.87□□□□□ -2.11
AMBRA1-208ENST00000529558 MRPS24Q96EL2 167 aaKnown RBP1.87□□□□□ -2.11
AMBRA1-208ENST00000529558 BORCS8Q96FH0 119 aa1.87□□□□□ -2.11
AMBRA1-208ENST00000529558 Q9BRP9 147 aa1.87□□□□□ -2.11
AMBRA1-208ENST00000529558 MRPL32Q9BYC8 188 aaKnown RBP1.87□□□□□ -2.11
AMBRA1-208ENST00000529558 LAMTOR2Q9Y2Q5 125 aa1.87□□□□□ -2.11
AMBRA1-208ENST00000529558 MED31Q9Y3C7 131 aa1.87□□□□□ -2.11
AMBRA1-208ENST00000529558 SHANK1Q9Y566 2161 aa1.87□□□□□ -2.11
AMBRA1-208ENST00000529558 NUMA1Q14980 2115 aa1.87□□□□□ -2.11
AMBRA1-208ENST00000529558 REV3LO60673 3130 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 OTOGLQ3ZCN5 2332 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 CITO14578 2027 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 DNAH14Q0VDD8 3507 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 TRGV10A0A0A0MS01 117 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 A0A0D9SG52 128 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 RFPL4AA6NLU0 287 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 RFPL4AL1F8VTS6 287 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 J3KT08 172 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 GADD45GO95257 159 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 APODP05090 189 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 HTR1AP08908 422 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 RNASE2P10153 161 aaKnown RBP1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 BCL2P10415 239 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 LGALS3P17931 250 aaKnown RBP1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 FUSP35637 526 aaKnown RBP eCLIP1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 SPINT3P49223 89 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 DYNLT3P51808 116 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 RPL26P61254 145 aaKnown RBP1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 RHOGP84095 191 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 CCSMST1Q4G0I0 132 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 HRCT1Q6UXD1 115 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 C4orf22Q6V702 233 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 DPPA3Q6W0C5 159 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 ZCCHC23Q6ZST2 131 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 RPS27LQ71UM5 84 aaKnown RBP1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 CTAGE3PQ8IX95 158 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 CCL4L1Q8NHW4 92 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 BORCS5Q969J3 196 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 COX14Q96I36 57 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 SLC25A21Q9BQT8 299 aaPredicted RBP1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 TMEM126AQ9H061 195 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 TCEAL2Q9H3H9 227 aaPredicted RBP1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 RPL26L1Q9UNX3 145 aaKnown RBP1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 C5orf42Q9H799 3197 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 PIEZO1Q92508 2521 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 CNOT1A5YKK6 2376 aaKnown RBP1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 HEATR5AQ86XA9 2040 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 CEP250Q9BV73 2442 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 AHCTF1Q8WYP5 2266 aa1.86□□□□□ -2.11
AMBRA1-208ENST00000529558 PTPRDP23468 1912 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 BDP1A6H8Y1 2624 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 TMSB15BA0A087X1C1 80 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 A0A1B0GX51 115 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 ODAMA1E959 279 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 C7orf71A4D174 169 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 E7EQL1 145 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 GABARAPH6UMI1 98 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 DEGS1O15121 323 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 CRYGAP11844 174 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 FKBP2P26885 142 aaKnown RBP1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 S100A11P31949 105 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 HINT1P49773 126 aaPredicted RBP1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 KRTAP12-2P59991 146 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 RPS28P62857 69 aaKnown RBP1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 SS18Q15532 418 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 OR8B8Q15620 311 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 NDUFA5Q16718 116 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 DEFB119Q8N690 84 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 LINC00304Q8N9R0 145 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 OR4E2Q8NGC2 313 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 OR4D11Q8NGI4 311 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 LZICQ8WZA0 190 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 C20orf166-AS1Q96NR2 134 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 YIPF3Q9GZM5 350 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 OTORQ9NRC9 128 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 NDUFB11Q9NX14 153 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 SPANXCQ9NY87 97 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 RASL12Q9NYN1 266 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 PRO2289Q9P1D8 64 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 PLXNA3P51805 1871 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 PDCD11Q14690 1871 aaKnown RBP1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 NUP210Q8TEM1 1887 aaPredicted RBP1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 NCOR2Q9Y618 2525 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 CACNA1GO43497 2377 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 MYH10P35580 1976 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 TRIOO75962 3097 aa1.85□□□□□ -2.11
AMBRA1-208ENST00000529558 MYO15AQ9UKN7 3530 aa1.84□□□□□ -2.11
AMBRA1-208ENST00000529558 TRAV36DV7A0A075B6V5 113 aa1.84□□□□□ -2.11
AMBRA1-208ENST00000529558 HMSDA8MTL9 139 aa1.84□□□□□ -2.11
AMBRA1-208ENST00000529558 NDUFB3O43676 98 aa1.84□□□□□ -2.11
AMBRA1-208ENST00000529558 C1QCP02747 245 aa1.84□□□□□ -2.11
AMBRA1-208ENST00000529558 CXCL1P09341 107 aa1.84□□□□□ -2.11
AMBRA1-208ENST00000529558 METTL15P1P0C7V9 234 aa1.84□□□□□ -2.11
AMBRA1-208ENST00000529558 P0C880 135 aa1.84□□□□□ -2.11
AMBRA1-208ENST00000529558 TRGC1P0CF51 173 aa1.84□□□□□ -2.11
AMBRA1-208ENST00000529558 GPX2P18283 190 aa1.84□□□□□ -2.11
AMBRA1-208ENST00000529558 PEBP1P30086 187 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 822.7 ms