RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 A0A096LPF7 62 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 CDK2AP2O75956 126 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 PLXNA4Q9HCM2 1894 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 CACNA1DQ01668 2161 aa6.48□□□□□ -1.37
CTNND1-220ENST00000529526 I3L3M4 83 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 PFN2P35080 140 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 Q0VG73 95 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 TCTEX1D4Q5JR98 221 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 IGFL3Q6UXB1 125 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 C2orf66Q6UXQ4 117 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 GTSF1LQ9H1H1 148 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 FAM215AQ9Y5M1 114 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 DAD1P61803 113 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 CR1LQ2VPA4 569 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 ADAMTSL5Q6ZMM2 481 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 MRPL52Q86TS9 123 aaKnown RBP6.47□□□□□ -1.37
CTNND1-220ENST00000529526 Q8N8P6 123 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 V9GYV3 84 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 NLRC5Q86WI3 1866 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 GATA3P23771 443 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 ZC2HC1AQ96GY0 325 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 IGHV1OR15-1A0A075B7D0 117 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 GAGE6Q13070 117 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 PMVKQ15126 192 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 KIAA2026Q5HYC2 2103 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 IGHV1-24A0A0C4DH33 117 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 SPRNQ5BIV9 151 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 ZNRF2Q8NHG8 242 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 KIAA1671Q9BY89 1806 aa6.47□□□□□ -1.37
CTNND1-220ENST00000529526 F8WEM9 126 aa6.46□□□□□ -1.37
CTNND1-220ENST00000529526 IGLV1-44P01699 117 aa6.46□□□□□ -1.37
CTNND1-220ENST00000529526 TCF15Q12870 199 aa6.46□□□□□ -1.37
CTNND1-220ENST00000529526 PLA2G2CQ5R387 149 aa6.46□□□□□ -1.37
CTNND1-220ENST00000529526 TRBV25-1A0A075B6N4 114 aa6.46□□□□□ -1.37
CTNND1-220ENST00000529526 SMIM27A0A1W2PRY6 76 aa6.46□□□□□ -1.37
CTNND1-220ENST00000529526 UBE2V1Q13404 147 aa6.46□□□□□ -1.37
CTNND1-220ENST00000529526 C17orf77Q96MU5 243 aa6.46□□□□□ -1.37
CTNND1-220ENST00000529526 PRR25Q96S07 402 aa6.46□□□□□ -1.37
CTNND1-220ENST00000529526 PLXNA2O75051 1894 aa6.46□□□□□ -1.38
CTNND1-220ENST00000529526 RNASE13Q5GAN3 156 aaKnown RBP6.46□□□□□ -1.38
CTNND1-220ENST00000529526 HLA-DMBP28068 263 aa6.46□□□□□ -1.38
CTNND1-220ENST00000529526 GRNP28799 593 aaKnown RBP6.46□□□□□ -1.38
CTNND1-220ENST00000529526 SPTA1P02549 2419 aa6.46□□□□□ -1.38
CTNND1-220ENST00000529526 WIPF3A6NGB9 483 aa6.46□□□□□ -1.38
CTNND1-220ENST00000529526 NDUFA4O00483 81 aa6.46□□□□□ -1.38
CTNND1-220ENST00000529526 SDHAF1A6NFY7 115 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 E9PQ18 207 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 TMEM141Q96I45 108 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 FRMPD3Q5JV73 1810 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 HEATR1Q9H583 2144 aaKnown RBP6.45□□□□□ -1.38
CTNND1-220ENST00000529526 FAM231BA6NCW3 169 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 CD5LO43866 347 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 HOXB4P17483 251 aaPredicted RBP6.45□□□□□ -1.38
CTNND1-220ENST00000529526 CDKN1BP46527 198 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 Q6ZWC4 215 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 FXYD5Q96DB9 178 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 PLXND1Q9Y4D7 1925 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 ZNF561-AS1K7EIQ3 104 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 K7EM74 188 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 NDUFS7O75251 213 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 CLPSL2Q6UWE3 100 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 NXPH4O95158 308 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 NPYP01303 97 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 LINC00311Q8N616 119 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 KLF12Q9Y4X4 402 aa6.45□□□□□ -1.38
CTNND1-220ENST00000529526 CT83Q5H943 113 aa6.44□□□□□ -1.38
CTNND1-220ENST00000529526 SIGLEC8Q9NYZ4 499 aa6.44□□□□□ -1.38
CTNND1-220ENST00000529526 A8MWP6 167 aa6.44□□□□□ -1.38
CTNND1-220ENST00000529526 F6UB75 175 aa6.44□□□□□ -1.38
CTNND1-220ENST00000529526 TMEM14CQ9P0S9 112 aa6.44□□□□□ -1.38
CTNND1-220ENST00000529526 HLA-DRB4P13762 266 aa6.44□□□□□ -1.38
CTNND1-220ENST00000529526 OVOL2Q9BRP0 275 aa6.44□□□□□ -1.38
CTNND1-220ENST00000529526 HLA-DRB4X5D2U9 266 aa6.44□□□□□ -1.38
CTNND1-220ENST00000529526 MYO7BQ6PIF6 2116 aa6.44□□□□□ -1.38
CTNND1-220ENST00000529526 SPRY2O43597 315 aa6.44□□□□□ -1.38
CTNND1-220ENST00000529526 IGLC1P0CG04 106 aa6.44□□□□□ -1.38
CTNND1-220ENST00000529526 K7EN84 100 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 RHODO00212 210 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 SPINK8P0C7L1 97 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 NCOR1P1Q9H4R4 102 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 IGHV7-4-1A0A0J9YVY3 117 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 SHISA9B4DS77 424 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 THAP8Q8NA92 274 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 VOPP1Q96AW1 172 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 CTSZQ9UBR2 303 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 C22orf46C9J442 243 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 TMEM243Q9BU79 118 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 GNRH2O43555 120 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 IGLV3-1P01715 115 aa6.43□□□□□ -1.38
CTNND1-220ENST00000529526 WT1P19544 449 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-220ENST00000529526 MORN5Q5VZ52 161 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 IGF2BP2-AS1Q96M15 143 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 DEFB136Q30KP8 78 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 PRSS33Q8NF86 280 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 VWC2Q2TAL6 325 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 DYNAPQ8N1N2 210 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 DNAJC30Q96LL9 226 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 MRPL35Q9NZE8 188 aaKnown RBP6.42□□□□□ -1.38
CTNND1-220ENST00000529526 IGHV4-59P01825 116 aa6.42□□□□□ -1.38
CTNND1-220ENST00000529526 FOXE3Q13461 319 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms