RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 RCHY1Q96PM5 261 aa10.21□□□□□ -0.77
USF1-209ENST00000529476 DYNC2H1Q8NCM8 4307 aaKnown RBP10.2□□□□□ -0.78
USF1-209ENST00000529476 PAGE4O60829 102 aa10.2□□□□□ -0.78
USF1-209ENST00000529476 GOLT1AQ6ZVE7 132 aa10.2□□□□□ -0.78
USF1-209ENST00000529476 ARL6IP6Q8N6S5 226 aa10.2□□□□□ -0.78
USF1-209ENST00000529476 C5orf17Q8NAS9 161 aa10.2□□□□□ -0.78
USF1-209ENST00000529476 C1QTNF4Q9BXJ3 329 aa10.2□□□□□ -0.78
USF1-209ENST00000529476 EPDR1Q9UM22 224 aa10.2□□□□□ -0.78
USF1-209ENST00000529476 TP53TG1Q9Y2A0 90 aa10.2□□□□□ -0.78
USF1-209ENST00000529476 SACSQ9NZJ4 4579 aa10.19□□□□□ -0.78
USF1-209ENST00000529476 TRAV12-2A0A075B6T6 113 aa10.19□□□□□ -0.78
USF1-209ENST00000529476 RBAKDNA6NC62 111 aa10.19□□□□□ -0.78
USF1-209ENST00000529476 TEX46H3BTG2 121 aa10.19□□□□□ -0.78
USF1-209ENST00000529476 CRXO43186 299 aaPredicted RBP10.19□□□□□ -0.78
USF1-209ENST00000529476 HBE1P02100 147 aa10.19□□□□□ -0.78
USF1-209ENST00000529476 TCRAP04437 139 aa10.19□□□□□ -0.78
USF1-209ENST00000529476 TMEM78Q5T7P6 136 aa10.19□□□□□ -0.78
USF1-209ENST00000529476 CST9LP1Q5W188 147 aa10.19□□□□□ -0.78
USF1-209ENST00000529476 Q8TAT8 98 aa10.19□□□□□ -0.78
USF1-209ENST00000529476 LINC00477Q96M19 166 aa10.19□□□□□ -0.78
USF1-209ENST00000529476 U3KQK5 164 aa10.19□□□□□ -0.78
USF1-209ENST00000529476 J3KRW8 73 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 IFNA7P01567 189 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 AMBPP02760 352 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 CDKN1BP46527 198 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 ATP5G3P48201 142 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 PPT1P50897 306 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 BLOC1S1P78537 153 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 KIR3DS1Q14943 382 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 TEX261Q6UWH6 196 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 FAM19A4Q96LR4 140 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 IGF2BP2-AS1Q96M15 143 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 ODF3Q96PU9 254 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 NKX6-2Q9C056 277 aaPredicted RBP10.18□□□□□ -0.78
USF1-209ENST00000529476 ZNF492Q9P255 531 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 GNG13Q9P2W3 67 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 ARL2-SNX15V9GYD0 113 aa10.18□□□□□ -0.78
USF1-209ENST00000529476 TRAV8-1A0A0A6YYK1 113 aa10.17□□□□□ -0.78
USF1-209ENST00000529476 TSPOP30536 169 aa10.17□□□□□ -0.78
USF1-209ENST00000529476 LEPP41159 167 aa10.17□□□□□ -0.78
USF1-209ENST00000529476 ZNF138P52744 262 aa10.17□□□□□ -0.78
USF1-209ENST00000529476 CCDC28AQ8IWP9 274 aa10.17□□□□□ -0.78
USF1-209ENST00000529476 C1orf158Q8N1D5 194 aa10.17□□□□□ -0.78
USF1-209ENST00000529476 ZNF680Q8NEM1 530 aa10.17□□□□□ -0.78
USF1-209ENST00000529476 OR11H2Q8NH07 326 aa10.17□□□□□ -0.78
USF1-209ENST00000529476 SGK494Q96LW2 274 aa10.17□□□□□ -0.78
USF1-209ENST00000529476 RARRES2Q99969 163 aa10.17□□□□□ -0.78
USF1-209ENST00000529476 ATG101Q9BSB4 218 aa10.17□□□□□ -0.78
USF1-209ENST00000529476 IGHV3OR16-12A0A075B7B8 117 aa10.16□□□□□ -0.78
USF1-209ENST00000529476 SERTM2A0A1B0GWG4 89 aa10.16□□□□□ -0.78
USF1-209ENST00000529476 PEX7O00628 323 aa10.16□□□□□ -0.78
USF1-209ENST00000529476 INSP01308 110 aa10.16□□□□□ -0.78
USF1-209ENST00000529476 RBMY1A1P0DJD3 496 aaKnown RBP10.16□□□□□ -0.78
USF1-209ENST00000529476 RBMY1CP0DJD4 496 aa10.16□□□□□ -0.78
USF1-209ENST00000529476 RBMY1FQ15415 496 aaKnown RBP10.16□□□□□ -0.78
USF1-209ENST00000529476 CYB561D1Q8N8Q1 229 aa10.16□□□□□ -0.78
USF1-209ENST00000529476 MANBALQ9NQG1 85 aa10.16□□□□□ -0.78
USF1-209ENST00000529476 X6R8D5 127 aa10.16□□□□□ -0.78
USF1-209ENST00000529476 TENM2Q9NT68 2774 aa10.16□□□□□ -0.78
USF1-209ENST00000529476 HUWE1Q7Z6Z7 4374 aaKnown RBP10.16□□□□□ -0.78
USF1-209ENST00000529476 K7EQM0 130 aa10.15□□□□□ -0.78
USF1-209ENST00000529476 CRISP2P16562 243 aa10.15□□□□□ -0.78
USF1-209ENST00000529476 GFI1BQ5VTD9 330 aa10.15□□□□□ -0.78
USF1-209ENST00000529476 ZNF705AQ6ZN79 300 aaPredicted RBP10.15□□□□□ -0.78
USF1-209ENST00000529476 ZFAND2AQ8N6M9 145 aa10.15□□□□□ -0.78
USF1-209ENST00000529476 LINC00479Q96M42 142 aa10.15□□□□□ -0.78
USF1-209ENST00000529476 GOLT1BQ9Y3E0 138 aa10.15□□□□□ -0.78
USF1-209ENST00000529476 TRAV34A0A0B4J273 112 aa10.14□□□□□ -0.79
USF1-209ENST00000529476 KLLNB2CW77 178 aa10.14□□□□□ -0.79
USF1-209ENST00000529476 C11orf94C9JXX5 98 aa10.14□□□□□ -0.79
USF1-209ENST00000529476 IGLV2-11P01706 119 aa10.14□□□□□ -0.79
USF1-209ENST00000529476 PRR9Q5T870 116 aa10.14□□□□□ -0.79
USF1-209ENST00000529476 LYPD6BQ8NI32 183 aa10.14□□□□□ -0.79
USF1-209ENST00000529476 PCNPQ8WW12 178 aaKnown RBP10.14□□□□□ -0.79
USF1-209ENST00000529476 HIST1H2BAQ96A08 127 aa10.14□□□□□ -0.79
USF1-209ENST00000529476 TVP23CQ96ET8 276 aa10.14□□□□□ -0.79
USF1-209ENST00000529476 PSG8Q9UQ74 426 aa10.14□□□□□ -0.79
USF1-209ENST00000529476 TRAV12-3A0A0B4J271 114 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 TRBV7-9A0A0J9YWB2 115 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 SCO2A0A1W2PP80 73 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 C7orf71A4D174 169 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 IFNA1P01562 189 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 GPX1P07203 203 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 BCL2P10415 239 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 RNASE4P34096 147 aaKnown RBP10.13□□□□□ -0.79
USF1-209ENST00000529476 FLI1Q01543 452 aaPredicted RBP10.13□□□□□ -0.79
USF1-209ENST00000529476 BTN1A1Q13410 526 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 PMS2P11Q13670 270 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 PRNTQ86SH4 94 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 TMEM75Q8N9X5 138 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 TCEAL7Q9BRU2 100 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 TMEM208Q9BTX3 173 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 LENEPQ9Y5L5 61 aa10.13□□□□□ -0.79
USF1-209ENST00000529476 F6UZH7 168 aa10.12□□□□□ -0.79
USF1-209ENST00000529476 DEFB4AO15263 64 aa10.12□□□□□ -0.79
USF1-209ENST00000529476 NMBP08949 121 aa10.12□□□□□ -0.79
USF1-209ENST00000529476 AKR1C3P42330 323 aa10.12□□□□□ -0.79
USF1-209ENST00000529476 Q8NAQ8 132 aa10.12□□□□□ -0.79
USF1-209ENST00000529476 LINC01587Q99440 93 aa10.12□□□□□ -0.79
USF1-209ENST00000529476 STAB2Q8WWQ8 2551 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms