RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 HLA-DRB4P13762 266 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 MYCNOSP40205 109 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 CA7P43166 264 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 CCL23P55773 120 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 KRTAP10-1P60331 282 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 NPC2P61916 151 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 RPS11P62280 158 aaKnown RBP eCLIP2.46□□□□□ -2.02
SOX6-212ENST00000529469 FAM222AQ5U5X8 452 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 RPL7L1Q6DKI1 246 aaKnown RBP2.46□□□□□ -2.02
SOX6-212ENST00000529469 WDR86Q86TI4 376 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 AMN1Q8IY45 258 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 DRAM1Q8N682 238 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 OR8B3Q8NGG8 313 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 SHANK2-AS3Q9BTD1 123 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 SCRT1Q9BWW7 348 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 SLC25A2Q9BXI2 301 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 IMUPQ9GZP8 106 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 LINC00597Q9H2U6 94 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 DNAJC15Q9Y5T4 150 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 SERP1Q9Y6X1 66 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 ARL2-SNX15V9GYD0 113 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 HLA-DRB4X5D2U9 266 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 DOCK8Q8NF50 2099 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 TICRRQ7Z2Z1 1910 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 UBR2Q8IWV8 1755 aa2.46□□□□□ -2.02
SOX6-212ENST00000529469 C1orf167Q5SNV9 1468 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 AFDNP55196 1824 aaKnown RBP2.45□□□□□ -2.02
SOX6-212ENST00000529469 TRAV2A0A0B4J234 112 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 TRAV1-1A0A0B4J248 108 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 TRAV41A0A0B4J266 112 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 NDUFC2-KCTD14E9PQ53 114 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 SYNGR2O43760 224 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 OR1I1O60431 355 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 CST7O76096 145 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 IGKCP01834 107 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 PRH1P02810 166 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 TLX1NBP0CAT3 122 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 C3orf79P0CE67 100 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 INAFM2P0DMQ5 153 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 COX6A1P12074 109 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 CD70P32970 193 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 SSR2P43308 183 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 UBE2G1P62253 170 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 SNRPD3P62318 126 aaKnown RBP2.45□□□□□ -2.02
SOX6-212ENST00000529469 ZNF816Q0VGE8 651 aaPredicted RBP2.45□□□□□ -2.02
SOX6-212ENST00000529469 ERCC8Q13216 396 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 CST6Q15828 149 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 LGALS9BQ3B8N2 356 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 ORMDL2Q53FV1 153 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 C1orf140Q5VVS0 124 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 UNQ9165/PRO28630Q6UXU0 137 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 MSRB3Q8IXL7 192 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 C15orf53Q8NAA6 179 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 RPS4Y2Q8TD47 263 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 DCANP1Q8TF63 244 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 CCL17Q92583 94 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 PRSS27Q9BQR3 290 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 TM2D3Q9BRN9 247 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 HHLA3Q9XRX5 114 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 HILPDAQ9Y5L2 63 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 TULP4Q9NRJ4 1543 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 GPATCH8Q9UKJ3 1502 aaKnown RBP2.45□□□□□ -2.02
SOX6-212ENST00000529469 RGPD3A6NKT7 1758 aaPredicted RBP2.45□□□□□ -2.02
SOX6-212ENST00000529469 TMEM131Q92545 1883 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 C2orf16Q68DN1 1984 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 PXDNLA1KZ92 1463 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 ADGRL1O94910 1474 aa2.45□□□□□ -2.02
SOX6-212ENST00000529469 ABCC8Q09428 1581 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 MYLKQ15746 1914 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 C10orf71Q711Q0 1435 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 DNMT1P26358 1616 aaKnown RBP2.44□□□□□ -2.02
SOX6-212ENST00000529469 AHDC1Q5TGY3 1603 aaPredicted RBP2.44□□□□□ -2.02
SOX6-212ENST00000529469 TRAV9-1A0A075B6T8 112 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 TRAV8-1A0A0A6YYK1 113 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 IGHV3-74A0A0B4J1X5 117 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 IGHV1-58A0A0C4DH39 117 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 IGKV1-8A0A0C4DH67 115 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 TRBV7-6A0A0J9YX20 115 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 A0A0J9YXV3 536 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 MDFIC2A0A1B0GVS7 189 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 hADV29S1A0JD25 119 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 IRGMA1A4Y4 181 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 C4orf51C9J302 202 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 LGALS9O00182 355 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 UBE2L6O14933 153 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 TCL1BO95988 128 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 SOD1P00441 154 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 PIPP12273 146 aaPredicted RBP2.44□□□□□ -2.02
SOX6-212ENST00000529469 LGALS3P17931 250 aaKnown RBP2.44□□□□□ -2.02
SOX6-212ENST00000529469 HLA-DMBP28068 263 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 CAV3P56539 151 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 QRFPP83859 136 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 CDK5R1Q15078 307 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 ZNF791Q3KP31 576 aaPredicted RBP2.44□□□□□ -2.02
SOX6-212ENST00000529469 CEMP1Q6PRD7 247 aaPredicted RBP2.44□□□□□ -2.02
SOX6-212ENST00000529469 CLEC19AQ6UXS0 136 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 Q6ZQT7 251 aa2.44□□□□□ -2.02
SOX6-212ENST00000529469 FAM19A3Q7Z5A8 133 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms