RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 GCSAMLQ5JQS6 135 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 Q6ZTI0 123 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 EXOC3-AS1Q8N2X6 119 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 ODF3Q96PU9 254 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 PYGO2Q9BRQ0 406 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 NMES1Q9C002 83 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 TMPRSS5Q9H3S3 457 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 GSN-AS1Q9NRJ2 163 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 TRGV1A0A0A0MS02 117 aa9.03□□□□□ -0.96
CPSF1-204ENST00000529288 PTTG1O95997 202 aa9.03□□□□□ -0.96
CPSF1-204ENST00000529288 SLC25A5P05141 298 aaKnown RBP9.03□□□□□ -0.96
CPSF1-204ENST00000529288 HIST1H1EP10412 219 aaKnown RBP9.03□□□□□ -0.96
CPSF1-204ENST00000529288 CD300CQ08708 224 aa9.03□□□□□ -0.96
CPSF1-204ENST00000529288 ESRGQ1W209 222 aa9.03□□□□□ -0.96
CPSF1-204ENST00000529288 FAM122CQ6P4D5 195 aa9.03□□□□□ -0.96
CPSF1-204ENST00000529288 LINC00612Q8N6U2 182 aa9.03□□□□□ -0.96
CPSF1-204ENST00000529288 THAP6Q8TBB0 222 aa9.03□□□□□ -0.96
CPSF1-204ENST00000529288 AAMDCQ9H7C9 122 aa9.03□□□□□ -0.96
CPSF1-204ENST00000529288 OR5AC2Q9NZP5 309 aa9.03□□□□□ -0.96
CPSF1-204ENST00000529288 NACAE9PAV3 2078 aa9.03□□□□□ -0.96
CPSF1-204ENST00000529288 IGKV2-40A0A087WW87 121 aaPredicted RBP9.02□□□□□ -0.97
CPSF1-204ENST00000529288 ZNF253O75346 499 aa9.02□□□□□ -0.97
CPSF1-204ENST00000529288 NDUFB4O95168 129 aa9.02□□□□□ -0.97
CPSF1-204ENST00000529288 IGKV2D-40P01614 121 aaPredicted RBP9.02□□□□□ -0.97
CPSF1-204ENST00000529288 GPX1P07203 203 aa9.02□□□□□ -0.97
CPSF1-204ENST00000529288 NHLH2Q02577 135 aa9.02□□□□□ -0.97
CPSF1-204ENST00000529288 ICAM4Q14773 271 aa9.02□□□□□ -0.97
CPSF1-204ENST00000529288 MIR17HGQ75NE6 70 aa9.02□□□□□ -0.97
CPSF1-204ENST00000529288 MRPL53Q96EL3 112 aaKnown RBP9.02□□□□□ -0.97
CPSF1-204ENST00000529288 LINC00477Q96M19 166 aa9.02□□□□□ -0.97
CPSF1-204ENST00000529288 AGPAT4-IT1Q9H0P7 198 aa9.02□□□□□ -0.97
CPSF1-204ENST00000529288 TMEM14CQ9P0S9 112 aa9.02□□□□□ -0.97
CPSF1-204ENST00000529288 PRELID1Q9Y255 219 aa9.02□□□□□ -0.97
CPSF1-204ENST00000529288 IGHV3-53P01767 116 aa9.01□□□□□ -0.97
CPSF1-204ENST00000529288 DAZ2Q13117 558 aaKnown RBP9.01□□□□□ -0.97
CPSF1-204ENST00000529288 LRRC37A5PQ49AS3 106 aa9.01□□□□□ -0.97
CPSF1-204ENST00000529288 TTC32Q5I0X7 151 aa9.01□□□□□ -0.97
CPSF1-204ENST00000529288 TMEM78Q5T7P6 136 aa9.01□□□□□ -0.97
CPSF1-204ENST00000529288 SPATA12Q7Z6I5 190 aa9.01□□□□□ -0.97
CPSF1-204ENST00000529288 EIF4E3Q8N5X7 224 aaKnown RBP9.01□□□□□ -0.97
CPSF1-204ENST00000529288 ZNF680Q8NEM1 530 aa9.01□□□□□ -0.97
CPSF1-204ENST00000529288 NPCDR1Q9BY65 106 aa9.01□□□□□ -0.97
CPSF1-204ENST00000529288 FUT9Q9Y231 359 aa9.01□□□□□ -0.97
CPSF1-204ENST00000529288 KLF12Q9Y4X4 402 aa9.01□□□□□ -0.97
CPSF1-204ENST00000529288 ALG5Q9Y673 324 aa9.01□□□□□ -0.97
CPSF1-204ENST00000529288 RGS13O14921 159 aa9□□□□□ -0.97
CPSF1-204ENST00000529288 MPDU1O75352 247 aa9□□□□□ -0.97
CPSF1-204ENST00000529288 OR5C1Q8NGR4 320 aa9□□□□□ -0.97
CPSF1-204ENST00000529288 PPP1R1CQ8WVI7 109 aa9□□□□□ -0.97
CPSF1-204ENST00000529288 ZNF503Q96F45 646 aa9□□□□□ -0.97
CPSF1-204ENST00000529288 VGLL1Q99990 258 aa9□□□□□ -0.97
CPSF1-204ENST00000529288 SLC25A2Q9BXI2 301 aa9□□□□□ -0.97
CPSF1-204ENST00000529288 KRTAP4-5Q9BYR2 181 aa9□□□□□ -0.97
CPSF1-204ENST00000529288 KRTAP1-5Q9BYS1 174 aa9□□□□□ -0.97
CPSF1-204ENST00000529288 SLC25A31Q9H0C2 315 aa9□□□□□ -0.97
CPSF1-204ENST00000529288 SSNA1O43805 119 aa8.99□□□□□ -0.97
CPSF1-204ENST00000529288 ZNF324O75467 553 aaPredicted RBP8.99□□□□□ -0.97
CPSF1-204ENST00000529288 OR10J4P0C629 311 aa8.99□□□□□ -0.97
CPSF1-204ENST00000529288 NBEAP1P0C6P0 100 aa8.99□□□□□ -0.97
CPSF1-204ENST00000529288 PDE6HQ13956 83 aa8.99□□□□□ -0.97
CPSF1-204ENST00000529288 CHAC2Q8WUX2 184 aa8.99□□□□□ -0.97
CPSF1-204ENST00000529288 ARPC5LQ9BPX5 153 aa8.99□□□□□ -0.97
CPSF1-204ENST00000529288 OR51M1Q9H341 326 aa8.99□□□□□ -0.97
CPSF1-204ENST00000529288 TP53TG3Q9ULZ0 132 aa8.99□□□□□ -0.97
CPSF1-204ENST00000529288 MRPS16Q9Y3D3 137 aaKnown RBP8.99□□□□□ -0.97
CPSF1-204ENST00000529288 A0A096LPF7 62 aa8.98□□□□□ -0.97
CPSF1-204ENST00000529288 KLLNB2CW77 178 aa8.98□□□□□ -0.97
CPSF1-204ENST00000529288 E5RGE8 158 aa8.98□□□□□ -0.97
CPSF1-204ENST00000529288 H3BNG1 76 aa8.98□□□□□ -0.97
CPSF1-204ENST00000529288 MPC2O95563 127 aa8.98□□□□□ -0.97
CPSF1-204ENST00000529288 CYCSP99999 105 aaKnown RBP8.98□□□□□ -0.97
CPSF1-204ENST00000529288 ANXA2RQ3ZCQ2 193 aa8.98□□□□□ -0.97
CPSF1-204ENST00000529288 Q6ZQT7 251 aa8.98□□□□□ -0.97
CPSF1-204ENST00000529288 MAPKAPK5-AS1Q8N8E1 139 aa8.98□□□□□ -0.97
CPSF1-204ENST00000529288 C11orf72Q8NBR9 251 aa8.98□□□□□ -0.97
CPSF1-204ENST00000529288 VSIG2Q96IQ7 327 aa8.98□□□□□ -0.97
CPSF1-204ENST00000529288 PAXXQ9BUH6 204 aa8.98□□□□□ -0.97
CPSF1-204ENST00000529288 Q9H3A6 140 aa8.98□□□□□ -0.97
CPSF1-204ENST00000529288 MRPL16Q9NX20 251 aaKnown RBP8.98□□□□□ -0.97
CPSF1-204ENST00000529288 IGHV1OR15-1A0A075B7D0 117 aa8.97□□□□□ -0.97
CPSF1-204ENST00000529288 PAX4O43316 350 aa8.97□□□□□ -0.97
CPSF1-204ENST00000529288 OR7C2O60412 319 aa8.97□□□□□ -0.97
CPSF1-204ENST00000529288 TCL1AP56279 114 aa8.97□□□□□ -0.97
CPSF1-204ENST00000529288 PRR9Q5T870 116 aa8.97□□□□□ -0.97
CPSF1-204ENST00000529288 C9orf47Q6ZRZ4 202 aa8.97□□□□□ -0.97
CPSF1-204ENST00000529288 Q8TAT8 98 aa8.97□□□□□ -0.97
CPSF1-204ENST00000529288 FAM167A-AS1Q96KT0 104 aa8.97□□□□□ -0.97
CPSF1-204ENST00000529288 FAM19A4Q96LR4 140 aa8.97□□□□□ -0.97
CPSF1-204ENST00000529288 UPK3BQ9BT76 320 aa8.97□□□□□ -0.97
CPSF1-204ENST00000529288 ABCA13Q86UQ4 5058 aa8.97□□□□□ -0.97
CPSF1-204ENST00000529288 C17orf112F2Z3M2 114 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 SPINK4O60575 86 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 CRISP2P16562 243 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 CSN1S1P47710 185 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 ZNF138P52744 262 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 RANP62826 216 aaKnown RBP8.96□□□□□ -0.98
CPSF1-204ENST00000529288 MUC21Q5SSG8 566 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 ZFAND2AQ8N6M9 145 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 PHYHIPLQ96FC7 376 aa8.96□□□□□ -0.98
CPSF1-204ENST00000529288 LINC00467Q9BRT7 94 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms