RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 EEF1AKMT3Q96AZ1 226 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 AGPAT4-IT1Q9H0P7 198 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 MAP1LC3AQ9H492 121 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 NXT2Q9NPJ8 142 aaKnown RBP6.45□□□□□ -1.38
CSTF3-208ENST00000528865 CEP250Q9BV73 2442 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 IGLV2-18A0A075B6J9 118 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 SMKR1H3BMG3 65 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 H3BRM9 83 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 SMAD7O15105 426 aaKnown RBP6.44□□□□□ -1.38
CSTF3-208ENST00000528865 ATP6V0E1O15342 81 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 BRI3O95415 125 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 ORM1P02763 201 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 RBX1P62877 108 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 CACNG7P62955 275 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 NHLH1Q02575 133 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 KIR3DS1Q14943 382 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 Q8N8P6 123 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 RNASE8Q8TDE3 154 aaKnown RBP6.44□□□□□ -1.38
CSTF3-208ENST00000528865 CCDC140Q96MF4 163 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 COL25A1Q9BXS0 654 aaPredicted RBP6.44□□□□□ -1.38
CSTF3-208ENST00000528865 MSRB1Q9NZV6 116 aa6.44□□□□□ -1.38
CSTF3-208ENST00000528865 SPENQ96T58 3664 aaKnown RBP6.44□□□□□ -1.38
CSTF3-208ENST00000528865 A1L4Q6 167 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 LINC01548A6NM66 108 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 H0Y8G0 127 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 NPFFO15130 113 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 SNAI2O43623 268 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 TNFRSF6BO95407 300 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 CDKN1BP46527 198 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 HSD52Q0P140 79 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 AMMECR1LQ6DCA0 310 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 PRSS57Q6UWY2 283 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 ADAMTSL5Q6ZMM2 481 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 C5orf56Q8N8D9 126 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 OR4C5Q8NGB2 326 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 METTL26Q96S19 204 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 HIGD1BQ9P298 99 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 C11orf21Q9P2W6 132 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 PEF1Q9UBV8 284 aaKnown RBP6.43□□□□□ -1.38
CSTF3-208ENST00000528865 SMPXQ9UHP9 88 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 TIMM8BQ9Y5J9 83 aaPredicted RBP6.43□□□□□ -1.38
CSTF3-208ENST00000528865 LENEPQ9Y5L5 61 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 WDFY4Q6ZS81 3184 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 BSNQ9UPA5 3926 aa6.43□□□□□ -1.38
CSTF3-208ENST00000528865 LOC400499M0QZD8 3231 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 TRAV8-6A0A0B4J262 113 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 IGHV7-4-1A0A0J9YVY3 117 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 C9orf118A6NHY6 69 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 CBY3A6NI87 242 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 G3V318 75 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 GAS8-AS1O95177 125 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 EVI2AP22794 236 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 SAA4P35542 130 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 LEPP41159 167 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 ATP5G2Q06055 141 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 ECSCRQ19T08 205 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 CLEC19AQ6UXS0 136 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 IL17RELQ6ZVW7 336 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 ITLN2Q8WWU7 325 aaPredicted RBP6.42□□□□□ -1.38
CSTF3-208ENST00000528865 DKK2Q9UBU2 259 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 HHLA3Q9XRX5 114 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 RAXQ9Y2V3 346 aa6.42□□□□□ -1.38
CSTF3-208ENST00000528865 MAP1BP46821 2468 aaKnown RBP6.42□□□□□ -1.38
CSTF3-208ENST00000528865 RIF1Q5UIP0 2472 aaKnown RBP6.42□□□□□ -1.38
CSTF3-208ENST00000528865 PTPRQQ9UMZ3 2332 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 FAM223BA6NKX1 122 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 ATP5LO75964 103 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 HLA-DRB4P13762 266 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 ODF1Q14990 250 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 UFSP1Q6NVU6 142 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 C8orf86Q6ZUL3 223 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 FAM223AQ8IWN6 122 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 RNF182Q8N6D2 247 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 NRACQ8N912 160 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 OR2K2Q8NGT1 345 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 GLMPQ8WWB7 406 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 MEGF9Q9H1U4 602 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 HLA-DRB4X5D2U9 266 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 ABCA4P78363 2273 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 ZFHX4Q86UP3 3567 aa6.41□□□□□ -1.38
CSTF3-208ENST00000528865 IGHV3OR16-8A0A075B7F1 116 aa6.4□□□□□ -1.38
CSTF3-208ENST00000528865 TRAV41A0A0B4J266 112 aa6.4□□□□□ -1.38
CSTF3-208ENST00000528865 IGHV3-35A0A0C4DH35 117 aa6.4□□□□□ -1.38
CSTF3-208ENST00000528865 C7orf71A4D174 169 aa6.4□□□□□ -1.38
CSTF3-208ENST00000528865 A6NDN8 102 aa6.4□□□□□ -1.38
CSTF3-208ENST00000528865 FXYD7P58549 80 aa6.4□□□□□ -1.38
CSTF3-208ENST00000528865 TMEM78Q5T7P6 136 aa6.4□□□□□ -1.38
CSTF3-208ENST00000528865 C9orf139Q6ZV77 190 aa6.4□□□□□ -1.38
CSTF3-208ENST00000528865 LINC00477Q96M19 166 aa6.4□□□□□ -1.38
CSTF3-208ENST00000528865 MOB4Q9Y3A3 225 aa6.4□□□□□ -1.38
CSTF3-208ENST00000528865 H3BUA1 57 aa6.39□□□□□ -1.39
CSTF3-208ENST00000528865 SOCS3O14543 225 aa6.39□□□□□ -1.39
CSTF3-208ENST00000528865 OVOL1O14753 267 aa6.39□□□□□ -1.39
CSTF3-208ENST00000528865 MED14OSP0DP75 135 aa6.39□□□□□ -1.39
CSTF3-208ENST00000528865 GATA1P15976 413 aaPredicted RBP6.39□□□□□ -1.39
CSTF3-208ENST00000528865 PPIFP30405 207 aaKnown RBP6.39□□□□□ -1.39
CSTF3-208ENST00000528865 SRSF1Q07955 248 aaKnown RBP eCLIP6.39□□□□□ -1.39
CSTF3-208ENST00000528865 SMIM15Q7Z3B0 74 aa6.39□□□□□ -1.39
CSTF3-208ENST00000528865 PCP2Q8IVA1 136 aa6.39□□□□□ -1.39
CSTF3-208ENST00000528865 APRG1Q8IVJ8 170 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms