RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 OR11H12B2RN74 326 aa9.02□□□□□ -0.97
TRAF3IP2-211ENST00000528599 PRAC2D3DTV9 90 aa9.02□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ATP5G3P48201 142 aa9.02□□□□□ -0.97
TRAF3IP2-211ENST00000528599 CST9LP1Q5W188 147 aa9.02□□□□□ -0.97
TRAF3IP2-211ENST00000528599 GTSCR1Q86UQ5 136 aa9.02□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ZNF738Q8NE65 137 aa9.02□□□□□ -0.97
TRAF3IP2-211ENST00000528599 FAM110AQ9BQ89 295 aa9.02□□□□□ -0.97
TRAF3IP2-211ENST00000528599 CLEC5AQ9NY25 188 aa9.02□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ZMAT5Q9UDW3 170 aaKnown RBP9.02□□□□□ -0.97
TRAF3IP2-211ENST00000528599 F6UB75 175 aa9.01□□□□□ -0.97
TRAF3IP2-211ENST00000528599 RAB5AP20339 215 aa9.01□□□□□ -0.97
TRAF3IP2-211ENST00000528599 CMC4P56277 68 aaPredicted RBP9.01□□□□□ -0.97
TRAF3IP2-211ENST00000528599 RPL23P62829 140 aaKnown RBP9.01□□□□□ -0.97
TRAF3IP2-211ENST00000528599 C11orf52Q96A22 123 aa9.01□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ISOC2Q96AB3 205 aa9.01□□□□□ -0.97
TRAF3IP2-211ENST00000528599 RPUSD4Q96CM3 377 aaKnown RBP9.01□□□□□ -0.97
TRAF3IP2-211ENST00000528599 KNCNA6PVL3 124 aa9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 SLC25A5P05141 298 aaKnown RBP9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ZNF705DP0CH99 300 aaPredicted RBP9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ZNF705BP0CI00 300 aaPredicted RBP9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 GNG5P63218 68 aa9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 GDF5OSQ5U4N7 250 aa9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 DEFB125Q8N687 156 aa9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ANAPC16Q96DE5 110 aa9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 MRPL53Q96EL3 112 aaKnown RBP9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ELOBQ15370 118 aa9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 C5orf17Q8NAS9 161 aa9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 EPDR1Q9UM22 224 aa9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 LY96Q9Y6Y9 160 aa9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 TGP01266 2768 aa9□□□□□ -0.97
TRAF3IP2-211ENST00000528599 A0A0J9YX75 114 aa8.99□□□□□ -0.97
TRAF3IP2-211ENST00000528599 C1orf196B1AJZ1 125 aa8.99□□□□□ -0.97
TRAF3IP2-211ENST00000528599 DIRC3C9JPN6 131 aa8.99□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ZNF674Q2M3X9 581 aa8.99□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ACTL10Q5JWF8 245 aa8.99□□□□□ -0.97
TRAF3IP2-211ENST00000528599 OR8A1Q8NGG7 326 aa8.99□□□□□ -0.97
TRAF3IP2-211ENST00000528599 CMTM2Q8TAZ6 248 aa8.99□□□□□ -0.97
TRAF3IP2-211ENST00000528599 SAV1Q9H4B6 383 aaPredicted RBP8.99□□□□□ -0.97
TRAF3IP2-211ENST00000528599 RPH3ALQ9UNE2 315 aa8.99□□□□□ -0.97
TRAF3IP2-211ENST00000528599 TRBV24-1A0A075B6N3 115 aa8.98□□□□□ -0.97
TRAF3IP2-211ENST00000528599 IGKV2-40A0A087WW87 121 aaPredicted RBP8.98□□□□□ -0.97
TRAF3IP2-211ENST00000528599 C9JCJ5 164 aa8.98□□□□□ -0.97
TRAF3IP2-211ENST00000528599 IGKV2D-40P01614 121 aaPredicted RBP8.98□□□□□ -0.97
TRAF3IP2-211ENST00000528599 TCRAP04437 139 aa8.98□□□□□ -0.97
TRAF3IP2-211ENST00000528599 CSN1S1P47710 185 aa8.98□□□□□ -0.97
TRAF3IP2-211ENST00000528599 RAB5BP61020 215 aa8.98□□□□□ -0.97
TRAF3IP2-211ENST00000528599 FOXI2Q6ZQN5 318 aa8.98□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ARL6IP6Q8N6S5 226 aa8.98□□□□□ -0.97
TRAF3IP2-211ENST00000528599 H3BMM0 161 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 HIST1H1AQ02539 215 aaPredicted RBP8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ERCC8Q13216 396 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ADIRFQ15847 76 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 EBLN2Q6P2I7 272 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 GOLT1AQ6ZVE7 132 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 LINC01551Q86U37 167 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 VGLL1Q99990 258 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 PYGO2Q9BRQ0 406 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 TCEAL7Q9BRU2 100 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 AURKAIP1Q9NWT8 199 aaPredicted RBP8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 AGRNO00468 2067 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 SCO2A0A1W2PP80 73 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 PEX7O00628 323 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 PPP1R2P9O14990 202 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 PFN1P07737 140 aaKnown RBP8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 HLA-DRB4P13762 266 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 CNN1P51911 297 aaKnown RBP8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 LINC00479Q96M42 142 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 IMMP2LQ96T52 175 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 ATG101Q9BSB4 218 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 SRD5A3Q9H8P0 318 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 BIN3Q9NQY0 253 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 HLA-DRB4X5D2U9 266 aa8.97□□□□□ -0.97
TRAF3IP2-211ENST00000528599 COL7A1Q02388 2944 aa8.96□□□□□ -0.97
TRAF3IP2-211ENST00000528599 TRAV8-1A0A0A6YYK1 113 aa8.96□□□□□ -0.98
TRAF3IP2-211ENST00000528599 RBMY1BA6NDE4 496 aaKnown RBP8.96□□□□□ -0.98
TRAF3IP2-211ENST00000528599 RBMY1EA6NEQ0 496 aaKnown RBP8.96□□□□□ -0.98
TRAF3IP2-211ENST00000528599 NPIPB6E9PJ23 425 aa8.96□□□□□ -0.98
TRAF3IP2-211ENST00000528599 IGKV3-20P01619 116 aa8.96□□□□□ -0.98
TRAF3IP2-211ENST00000528599 RBMY1DP0C7P1 496 aaKnown RBP8.96□□□□□ -0.98
TRAF3IP2-211ENST00000528599 OR10J6PQ8NGY7 276 aa8.96□□□□□ -0.98
TRAF3IP2-211ENST00000528599 AGPAT4-IT1Q9H0P7 198 aa8.96□□□□□ -0.98
TRAF3IP2-211ENST00000528599 H7BYZ3 331 aa8.95□□□□□ -0.98
TRAF3IP2-211ENST00000528599 K7EIL1 84 aa8.95□□□□□ -0.98
TRAF3IP2-211ENST00000528599 IGHV4-30-4P0DP06 118 aa8.95□□□□□ -0.98
TRAF3IP2-211ENST00000528599 C9orf47Q6ZRZ4 202 aa8.95□□□□□ -0.98
TRAF3IP2-211ENST00000528599 TRPT1Q86TN4 253 aaKnown RBP8.95□□□□□ -0.98
TRAF3IP2-211ENST00000528599 STHQ8IWL8 128 aa8.95□□□□□ -0.98
TRAF3IP2-211ENST00000528599 OR4B1Q8NGF8 309 aa8.95□□□□□ -0.98
TRAF3IP2-211ENST00000528599 SGK494Q96LW2 274 aa8.95□□□□□ -0.98
TRAF3IP2-211ENST00000528599 TRAV34A0A0B4J273 112 aa8.94□□□□□ -0.98
TRAF3IP2-211ENST00000528599 RBAKDNA6NC62 111 aa8.94□□□□□ -0.98
TRAF3IP2-211ENST00000528599 A8MTW9 85 aa8.94□□□□□ -0.98
TRAF3IP2-211ENST00000528599 DUSP14O95147 198 aaKnown RBP8.94□□□□□ -0.98
TRAF3IP2-211ENST00000528599 IGLV2-11P01706 119 aa8.94□□□□□ -0.98
TRAF3IP2-211ENST00000528599 CXCL1P09341 107 aa8.94□□□□□ -0.98
TRAF3IP2-211ENST00000528599 CT45A10P0DMU9 189 aa8.94□□□□□ -0.98
TRAF3IP2-211ENST00000528599 S100PP25815 95 aa8.94□□□□□ -0.98
TRAF3IP2-211ENST00000528599 AMTNQ6UX39 209 aa8.94□□□□□ -0.98
TRAF3IP2-211ENST00000528599 Q8TAT8 98 aa8.94□□□□□ -0.98
TRAF3IP2-211ENST00000528599 C2CD4CQ8TF44 421 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms