RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 RAB24Q969Q5 203 aa12□□□□□ -0.49
HIF3A-211ENST00000528563 HMGB3O15347 200 aaKnown RBP11.99□□□□□ -0.49
HIF3A-211ENST00000528563 STAG3L2P0CL84 134 aa11.99□□□□□ -0.49
HIF3A-211ENST00000528563 STAG3L3P0CL85 134 aa11.99□□□□□ -0.49
HIF3A-211ENST00000528563 CDC34P49427 236 aaPredicted RBP11.99□□□□□ -0.49
HIF3A-211ENST00000528563 TCTAP57738 103 aa11.99□□□□□ -0.49
HIF3A-211ENST00000528563 NIPSNAP3BQ9BS92 247 aa11.99□□□□□ -0.49
HIF3A-211ENST00000528563 CYTL1Q9NRR1 136 aa11.99□□□□□ -0.49
HIF3A-211ENST00000528563 DEFB131BA0A096LNP1 70 aa11.98□□□□□ -0.49
HIF3A-211ENST00000528563 KLLNB2CW77 178 aa11.98□□□□□ -0.49
HIF3A-211ENST00000528563 IGLL5B9A064 214 aa11.98□□□□□ -0.49
HIF3A-211ENST00000528563 SLC25A5P05141 298 aaKnown RBP11.98□□□□□ -0.49
HIF3A-211ENST00000528563 NMBP08949 121 aa11.98□□□□□ -0.49
HIF3A-211ENST00000528563 CRISP2P16562 243 aa11.98□□□□□ -0.49
HIF3A-211ENST00000528563 CSN1S1P47710 185 aa11.98□□□□□ -0.49
HIF3A-211ENST00000528563 ZNF493Q6ZR52 646 aa11.98□□□□□ -0.49
HIF3A-211ENST00000528563 OR11H4Q8NGC9 324 aa11.98□□□□□ -0.49
HIF3A-211ENST00000528563 ZNF492Q9P255 531 aa11.98□□□□□ -0.49
HIF3A-211ENST00000528563 APLNQ9ULZ1 77 aa11.98□□□□□ -0.49
HIF3A-211ENST00000528563 TRAV12-3A0A0B4J271 114 aa11.97□□□□□ -0.49
HIF3A-211ENST00000528563 RBAKDNA6NC62 111 aa11.97□□□□□ -0.49
HIF3A-211ENST00000528563 PGPA6NDG6 321 aa11.97□□□□□ -0.49
HIF3A-211ENST00000528563 J3KRW8 73 aa11.97□□□□□ -0.49
HIF3A-211ENST00000528563 ARL14EPLP0DKL9 152 aa11.97□□□□□ -0.49
HIF3A-211ENST00000528563 HTN1P15515 57 aa11.97□□□□□ -0.49
HIF3A-211ENST00000528563 TMEM78Q5T7P6 136 aa11.97□□□□□ -0.49
HIF3A-211ENST00000528563 ZFAND2AQ8N6M9 145 aa11.97□□□□□ -0.49
HIF3A-211ENST00000528563 SUN5Q8TC36 379 aa11.97□□□□□ -0.49
HIF3A-211ENST00000528563 RXFP4Q8TDU9 374 aa11.97□□□□□ -0.49
HIF3A-211ENST00000528563 OTORQ9NRC9 128 aa11.97□□□□□ -0.49
HIF3A-211ENST00000528563 PLECQ15149 4684 aaKnown RBP11.97□□□□□ -0.49
HIF3A-211ENST00000528563 RYR2Q92736 4967 aa11.97□□□□□ -0.49
HIF3A-211ENST00000528563 LYRM9A8MSI8 78 aa11.96□□□□□ -0.49
HIF3A-211ENST00000528563 HMSDA8MTL9 139 aa11.96□□□□□ -0.49
HIF3A-211ENST00000528563 DIRC3C9JPN6 131 aa11.96□□□□□ -0.49
HIF3A-211ENST00000528563 ZNF324O75467 553 aaPredicted RBP11.96□□□□□ -0.49
HIF3A-211ENST00000528563 ZNF138P52744 262 aa11.96□□□□□ -0.49
HIF3A-211ENST00000528563 CD300CQ08708 224 aa11.96□□□□□ -0.49
HIF3A-211ENST00000528563 KCNRGQ8N5I3 272 aa11.96□□□□□ -0.49
HIF3A-211ENST00000528563 ARL6IP6Q8N6S5 226 aa11.96□□□□□ -0.49
HIF3A-211ENST00000528563 RNASE8Q8TDE3 154 aaKnown RBP11.96□□□□□ -0.49
HIF3A-211ENST00000528563 ACTR3CQ9C0K3 210 aaPredicted RBP11.96□□□□□ -0.49
HIF3A-211ENST00000528563 TRBV7-9A0A0J9YWB2 115 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 C7orf71A4D174 169 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 LY6G6CO95867 125 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 RNASE4P34096 147 aaKnown RBP11.95□□□□□ -0.5
HIF3A-211ENST00000528563 ZNF345Q14585 488 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 C16orf74Q96GX8 76 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 HYLS1Q96M11 299 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 SACSQ9NZJ4 4579 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 IGHV4-4A0A075B6R2 117 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 GPX1P07203 203 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 GCHFRP30047 84 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 DAD1P61803 113 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 FAM74A1Q5RGS3 127 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 LGALS9CQ6DKI2 356 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 SSX7Q7RTT5 188 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 TMEM263Q8WUH6 116 aaKnown RBP11.95□□□□□ -0.5
HIF3A-211ENST00000528563 PYGO2Q9BRQ0 406 aa11.95□□□□□ -0.5
HIF3A-211ENST00000528563 CXorf1O96002 111 aa11.94□□□□□ -0.5
HIF3A-211ENST00000528563 ZNF726P1Q15940 193 aa11.94□□□□□ -0.5
HIF3A-211ENST00000528563 Q6ZNX1 250 aa11.94□□□□□ -0.5
HIF3A-211ENST00000528563 CCDC28AQ8IWP9 274 aa11.94□□□□□ -0.5
HIF3A-211ENST00000528563 LINC00467Q9BRT7 94 aa11.94□□□□□ -0.5
HIF3A-211ENST00000528563 TIMM8BQ9Y5J9 83 aaPredicted RBP11.94□□□□□ -0.5
HIF3A-211ENST00000528563 BTN1A1Q13410 526 aa11.93□□□□□ -0.5
HIF3A-211ENST00000528563 PRR9Q5T870 116 aa11.93□□□□□ -0.5
HIF3A-211ENST00000528563 Q8TAT8 98 aa11.93□□□□□ -0.5
HIF3A-211ENST00000528563 CMTM2Q8TAZ6 248 aa11.93□□□□□ -0.5
HIF3A-211ENST00000528563 ARPC5LQ9BPX5 153 aa11.93□□□□□ -0.5
HIF3A-211ENST00000528563 DNAH1Q9P2D7 4330 aa11.93□□□□□ -0.5
HIF3A-211ENST00000528563 A0A0D9SG52 128 aa11.92□□□□□ -0.5
HIF3A-211ENST00000528563 DEFB130BP0DP73 79 aa11.92□□□□□ -0.5
HIF3A-211ENST00000528563 DEFB130AP0DP74 79 aa11.92□□□□□ -0.5
HIF3A-211ENST00000528563 TMED6Q8WW62 240 aa11.92□□□□□ -0.5
HIF3A-211ENST00000528563 ST6GAL2Q96JF0 529 aa11.92□□□□□ -0.5
HIF3A-211ENST00000528563 FAM210BQ96KR6 192 aa11.92□□□□□ -0.5
HIF3A-211ENST00000528563 NOP10Q9NPE3 64 aaKnown RBP11.92□□□□□ -0.5
HIF3A-211ENST00000528563 LENEPQ9Y5L5 61 aa11.92□□□□□ -0.5
HIF3A-211ENST00000528563 ALMS1Q8TCU4 4167 aa11.92□□□□□ -0.5
HIF3A-211ENST00000528563 CTXND1A0A1B0GTU2 59 aa11.91□□□□□ -0.5
HIF3A-211ENST00000528563 AKR1C8PQ5T2L2 129 aa11.91□□□□□ -0.5
HIF3A-211ENST00000528563 Q6ZQT7 251 aa11.91□□□□□ -0.5
HIF3A-211ENST00000528563 TMEM167BQ9NRX6 74 aa11.91□□□□□ -0.5
HIF3A-211ENST00000528563 CBY3A6NI87 242 aa11.9□□□□□ -0.5
HIF3A-211ENST00000528563 ANXA2RQ3ZCQ2 193 aa11.9□□□□□ -0.5
HIF3A-211ENST00000528563 GOLT1AQ6ZVE7 132 aa11.9□□□□□ -0.5
HIF3A-211ENST00000528563 NDUFAF3Q9BU61 184 aa11.9□□□□□ -0.5
HIF3A-211ENST00000528563 HTN3P15516 51 aa11.89□□□□□ -0.51
HIF3A-211ENST00000528563 SUMO1P63165 101 aaKnown RBP11.89□□□□□ -0.51
HIF3A-211ENST00000528563 LINC00612Q8N6U2 182 aa11.89□□□□□ -0.51
HIF3A-211ENST00000528563 GNG5P63218 68 aa11.89□□□□□ -0.51
HIF3A-211ENST00000528563 DAZ2Q13117 558 aaKnown RBP11.89□□□□□ -0.51
HIF3A-211ENST00000528563 EIF4E3Q8N5X7 224 aaKnown RBP11.89□□□□□ -0.51
HIF3A-211ENST00000528563 C5orf17Q8NAS9 161 aa11.89□□□□□ -0.51
HIF3A-211ENST00000528563 C11orf72Q8NBR9 251 aa11.89□□□□□ -0.51
HIF3A-211ENST00000528563 TVP23CQ96ET8 276 aa11.89□□□□□ -0.51
HIF3A-211ENST00000528563 TMPRSS5Q9H3S3 457 aa11.89□□□□□ -0.51
HIF3A-211ENST00000528563 RPH3ALQ9UNE2 315 aa11.89□□□□□ -0.51
HIF3A-211ENST00000528563 GGTLC3B5MD39 225 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 329.5 ms