RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 A0A1B0GV50 99 aa9.32□□□□□ -0.92
SCN3B-205ENST00000528267 RAB19A4D1S5 217 aa9.32□□□□□ -0.92
SCN3B-205ENST00000528267 DUSP14O95147 198 aaKnown RBP9.32□□□□□ -0.92
SCN3B-205ENST00000528267 ZNF705AQ6ZN79 300 aaPredicted RBP9.32□□□□□ -0.92
SCN3B-205ENST00000528267 EIF4E3Q8N5X7 224 aaKnown RBP9.32□□□□□ -0.92
SCN3B-205ENST00000528267 FAM19A4Q96LR4 140 aa9.32□□□□□ -0.92
SCN3B-205ENST00000528267 VGLL1Q99990 258 aa9.32□□□□□ -0.92
SCN3B-205ENST00000528267 MAP1LC3B2A6NCE7 125 aa9.31□□□□□ -0.92
SCN3B-205ENST00000528267 GGTLC3B5MD39 225 aa9.31□□□□□ -0.92
SCN3B-205ENST00000528267 PRM2P04554 102 aa9.31□□□□□ -0.92
SCN3B-205ENST00000528267 S100A1P23297 94 aa9.31□□□□□ -0.92
SCN3B-205ENST00000528267 GNG5P63218 68 aa9.31□□□□□ -0.92
SCN3B-205ENST00000528267 Q8NAQ8 132 aa9.31□□□□□ -0.92
SCN3B-205ENST00000528267 OR11H2Q8NH07 326 aa9.31□□□□□ -0.92
SCN3B-205ENST00000528267 MAP1LC3BQ9GZQ8 125 aa9.31□□□□□ -0.92
SCN3B-205ENST00000528267 AGPAT4-IT1Q9H0P7 198 aa9.31□□□□□ -0.92
SCN3B-205ENST00000528267 PRELID1Q9Y255 219 aa9.31□□□□□ -0.92
SCN3B-205ENST00000528267 YTHDF2Q9Y5A9 579 aaKnown RBP9.31□□□□□ -0.92
SCN3B-205ENST00000528267 A0A0J9YWU9 116 aa9.3□□□□□ -0.92
SCN3B-205ENST00000528267 PGPA6NDG6 321 aa9.3□□□□□ -0.92
SCN3B-205ENST00000528267 DEFB4AO15263 64 aa9.3□□□□□ -0.92
SCN3B-205ENST00000528267 CXorf1O96002 111 aa9.3□□□□□ -0.92
SCN3B-205ENST00000528267 PRR9Q5T870 116 aa9.3□□□□□ -0.92
SCN3B-205ENST00000528267 UQCC3Q6UW78 93 aa9.3□□□□□ -0.92
SCN3B-205ENST00000528267 LYPD1Q8N2G4 141 aa9.3□□□□□ -0.92
SCN3B-205ENST00000528267 RARRES2Q99969 163 aa9.3□□□□□ -0.92
SCN3B-205ENST00000528267 AAMDCQ9H7C9 122 aa9.3□□□□□ -0.92
SCN3B-205ENST00000528267 OTORQ9NRC9 128 aa9.3□□□□□ -0.92
SCN3B-205ENST00000528267 DIRC3C9JPN6 131 aa9.29□□□□□ -0.92
SCN3B-205ENST00000528267 CCL20P78556 96 aa9.29□□□□□ -0.92
SCN3B-205ENST00000528267 Q6ZQT7 251 aa9.29□□□□□ -0.92
SCN3B-205ENST00000528267 C9orf47Q6ZRZ4 202 aa9.29□□□□□ -0.92
SCN3B-205ENST00000528267 Q8TAT8 98 aa9.29□□□□□ -0.92
SCN3B-205ENST00000528267 IGF2BP2-AS1Q96M15 143 aa9.29□□□□□ -0.92
SCN3B-205ENST00000528267 FAM210AQ96ND0 272 aa9.29□□□□□ -0.92
SCN3B-205ENST00000528267 WWC2-AS2Q96NR7 200 aa9.29□□□□□ -0.92
SCN3B-205ENST00000528267 SACSQ9NZJ4 4579 aa9.28□□□□□ -0.92
SCN3B-205ENST00000528267 IGHV4-28A0A0C4DH34 117 aa9.28□□□□□ -0.92
SCN3B-205ENST00000528267 NUTF2P61970 127 aaKnown RBP9.28□□□□□ -0.92
SCN3B-205ENST00000528267 GFI1BQ5VTD9 330 aa9.28□□□□□ -0.92
SCN3B-205ENST00000528267 OR10J6PQ8NGY7 276 aa9.28□□□□□ -0.92
SCN3B-205ENST00000528267 C1QTNF4Q9BXJ3 329 aa9.28□□□□□ -0.92
SCN3B-205ENST00000528267 TREM1Q9NP99 234 aa9.28□□□□□ -0.92
SCN3B-205ENST00000528267 TMEM167BQ9NRX6 74 aa9.28□□□□□ -0.92
SCN3B-205ENST00000528267 RPH3ALQ9UNE2 315 aa9.28□□□□□ -0.92
SCN3B-205ENST00000528267 KMT2CQ8NEZ4 4911 aaKnown RBP9.27□□□□□ -0.93
SCN3B-205ENST00000528267 IGHV3OR16-12A0A075B7B8 117 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 TRAV8-1A0A0A6YYK1 113 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 J3KRW8 73 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 IFNA1P01562 189 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 CDKN1BP46527 198 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 UBE2G2P60604 165 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 SRSF3P84103 164 aaKnown RBP9.27□□□□□ -0.93
SCN3B-205ENST00000528267 PEA15Q15121 130 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 TOR2AQ5JU69 321 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 IQCF2Q8IXL9 164 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 ZFAND2AQ8N6M9 145 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 TVP23CQ96ET8 276 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 ODF3Q96PU9 254 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 EIF5A2Q9GZV4 153 aaKnown RBP9.27□□□□□ -0.93
SCN3B-205ENST00000528267 ZNF492Q9P255 531 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 GNG13Q9P2W3 67 aa9.27□□□□□ -0.93
SCN3B-205ENST00000528267 RBFOX3A6NFN3 312 aa9.26□□□□□ -0.93
SCN3B-205ENST00000528267 FAM74A7A6NL05 159 aa9.26□□□□□ -0.93
SCN3B-205ENST00000528267 KLLNB2CW77 178 aa9.26□□□□□ -0.93
SCN3B-205ENST00000528267 INSP01308 110 aa9.26□□□□□ -0.93
SCN3B-205ENST00000528267 BTN1A1Q13410 526 aa9.26□□□□□ -0.93
SCN3B-205ENST00000528267 GOLT1AQ6ZVE7 132 aa9.26□□□□□ -0.93
SCN3B-205ENST00000528267 SGK494Q96LW2 274 aa9.26□□□□□ -0.93
SCN3B-205ENST00000528267 C11orf68Q9H3H3 251 aaKnown RBP9.26□□□□□ -0.93
SCN3B-205ENST00000528267 DNAH1Q9P2D7 4330 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 LOC102723971A0A1B0GUV8 181 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 A0A1W2PRE2 83 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 PLAC8L1A1L4L8 177 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 RBAKDNA6NC62 111 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 IGLV2-11P01706 119 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 AMBPP02760 352 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 TCRAP04437 139 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 SLC25A5P05141 298 aaKnown RBP9.25□□□□□ -0.93
SCN3B-205ENST00000528267 CRISP2P16562 243 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 ATP5G3P48201 142 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 PPT1P50897 306 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 SUMO1P63165 101 aaKnown RBP9.25□□□□□ -0.93
SCN3B-205ENST00000528267 PMS2P11Q13670 270 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 ZNF506Q5JVG8 444 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 CCDC28AQ8IWP9 274 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 LINC00477Q96M19 166 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 NEU1Q99519 415 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 CELA1Q9UNI1 258 aa9.25□□□□□ -0.93
SCN3B-205ENST00000528267 ZNF705GA8MUZ8 300 aaPredicted RBP9.24□□□□□ -0.93
SCN3B-205ENST00000528267 KRBOX1C9JBD0 128 aa9.24□□□□□ -0.93
SCN3B-205ENST00000528267 BCL2P10415 239 aa9.24□□□□□ -0.93
SCN3B-205ENST00000528267 MIFP14174 115 aa9.24□□□□□ -0.93
SCN3B-205ENST00000528267 AZU1P20160 251 aa9.24□□□□□ -0.93
SCN3B-205ENST00000528267 ZNF138P52744 262 aa9.24□□□□□ -0.93
SCN3B-205ENST00000528267 C5orf17Q8NAS9 161 aa9.24□□□□□ -0.93
SCN3B-205ENST00000528267 IL17DQ8TAD2 202 aa9.24□□□□□ -0.93
SCN3B-205ENST00000528267 RXFP4Q8TDU9 374 aa9.24□□□□□ -0.93
SCN3B-205ENST00000528267 LINC00479Q96M42 142 aa9.24□□□□□ -0.93
SCN3B-205ENST00000528267 SMDT1Q9H4I9 107 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms