RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 PDE6HQ13956 83 aa17.88■□□□□ 0.45
TRIM3-206ENST00000528227 ATP6V1FQ16864 119 aa17.88■□□□□ 0.45
TRIM3-206ENST00000528227 ZNF680Q8NEM1 530 aa17.88■□□□□ 0.45
TRIM3-206ENST00000528227 LINC00467Q9BRT7 94 aa17.88■□□□□ 0.45
TRIM3-206ENST00000528227 PRELID1Q9Y255 219 aa17.88■□□□□ 0.45
TRIM3-206ENST00000528227 MRPS16Q9Y3D3 137 aaKnown RBP17.88■□□□□ 0.45
TRIM3-206ENST00000528227 TIMM9Q9Y5J7 89 aa17.88■□□□□ 0.45
TRIM3-206ENST00000528227 ZNF324O75467 553 aaPredicted RBP17.87■□□□□ 0.45
TRIM3-206ENST00000528227 PYYP10082 97 aa17.87■□□□□ 0.45
TRIM3-206ENST00000528227 LINC00477Q96M19 166 aa17.87■□□□□ 0.45
TRIM3-206ENST00000528227 C18orf15Q96N68 181 aa17.87■□□□□ 0.45
TRIM3-206ENST00000528227 AGPAT4-IT1Q9H0P7 198 aa17.87■□□□□ 0.45
TRIM3-206ENST00000528227 GSN-AS1Q9NRJ2 163 aa17.87■□□□□ 0.45
TRIM3-206ENST00000528227 CD300CQ08708 224 aa17.86■□□□□ 0.45
TRIM3-206ENST00000528227 BTN1A1Q13410 526 aa17.86■□□□□ 0.45
TRIM3-206ENST00000528227 GCSAMLQ5JQS6 135 aa17.86■□□□□ 0.45
TRIM3-206ENST00000528227 EXOC3-AS1Q8N2X6 119 aa17.86■□□□□ 0.45
TRIM3-206ENST00000528227 VSIG2Q96IQ7 327 aa17.86■□□□□ 0.45
TRIM3-206ENST00000528227 CCDC32Q9BV29 185 aa17.86■□□□□ 0.45
TRIM3-206ENST00000528227 GPN1Q9HCN4 374 aaPredicted RBP17.86■□□□□ 0.45
TRIM3-206ENST00000528227 LRP1BQ9NZR2 4599 aa17.85■□□□□ 0.45
TRIM3-206ENST00000528227 A0A1W2PPQ1 181 aa17.85■□□□□ 0.45
TRIM3-206ENST00000528227 MPDU1O75352 247 aa17.85■□□□□ 0.45
TRIM3-206ENST00000528227 ANXA2RQ3ZCQ2 193 aa17.85■□□□□ 0.45
TRIM3-206ENST00000528227 BLNKQ8WV28 456 aa17.85■□□□□ 0.45
TRIM3-206ENST00000528227 NPCDR1Q9BY65 106 aa17.85■□□□□ 0.45
TRIM3-206ENST00000528227 TRGV2A0A075B6R0 118 aa17.84■□□□□ 0.45
TRIM3-206ENST00000528227 C9orf47Q6ZRZ4 202 aa17.84■□□□□ 0.45
TRIM3-206ENST00000528227 SPATA12Q7Z6I5 190 aa17.84■□□□□ 0.45
TRIM3-206ENST00000528227 EIF4E3Q8N5X7 224 aaKnown RBP17.84■□□□□ 0.45
TRIM3-206ENST00000528227 SLC25A2Q9BXI2 301 aa17.84■□□□□ 0.45
TRIM3-206ENST00000528227 A0A096LPF7 62 aa17.83■□□□□ 0.44
TRIM3-206ENST00000528227 FAM240BA0A1B0GVZ2 78 aa17.83■□□□□ 0.44
TRIM3-206ENST00000528227 CRISP2P16562 243 aa17.83■□□□□ 0.44
TRIM3-206ENST00000528227 RNASE4P34096 147 aaKnown RBP17.83■□□□□ 0.44
TRIM3-206ENST00000528227 AAMDCQ9H7C9 122 aa17.83■□□□□ 0.44
TRIM3-206ENST00000528227 NDUFA13Q9P0J0 144 aa17.83■□□□□ 0.44
TRIM3-206ENST00000528227 TRGV1A0A0A0MS02 117 aa17.82■□□□□ 0.44
TRIM3-206ENST00000528227 FUT9Q9Y231 359 aa17.82■□□□□ 0.44
TRIM3-206ENST00000528227 KLF12Q9Y4X4 402 aa17.82■□□□□ 0.44
TRIM3-206ENST00000528227 SPINK4O60575 86 aa17.81■□□□□ 0.44
TRIM3-206ENST00000528227 GPX1P07203 203 aa17.81■□□□□ 0.44
TRIM3-206ENST00000528227 NMBP08949 121 aa17.81■□□□□ 0.44
TRIM3-206ENST00000528227 BTF3P20290 206 aaKnown RBP17.81■□□□□ 0.44
TRIM3-206ENST00000528227 TCL1AP56279 114 aa17.81■□□□□ 0.44
TRIM3-206ENST00000528227 NHLH2Q02577 135 aa17.81■□□□□ 0.44
TRIM3-206ENST00000528227 ICAM4Q14773 271 aa17.81■□□□□ 0.44
TRIM3-206ENST00000528227 MAPKAPK5-AS1Q8N8E1 139 aa17.81■□□□□ 0.44
TRIM3-206ENST00000528227 THAP6Q8TBB0 222 aa17.81■□□□□ 0.44
TRIM3-206ENST00000528227 FAM167A-AS1Q96KT0 104 aa17.81■□□□□ 0.44
TRIM3-206ENST00000528227 IGKV2-40A0A087WW87 121 aaPredicted RBP17.8■□□□□ 0.44
TRIM3-206ENST00000528227 IGKV2D-40P01614 121 aaPredicted RBP17.8■□□□□ 0.44
TRIM3-206ENST00000528227 MIR17HGQ75NE6 70 aa17.8■□□□□ 0.44
TRIM3-206ENST00000528227 ZFAND2AQ8N6M9 145 aa17.8■□□□□ 0.44
TRIM3-206ENST00000528227 VGLL1Q99990 258 aa17.8■□□□□ 0.44
TRIM3-206ENST00000528227 IBA57Q5T440 356 aaKnown RBP17.79■□□□□ 0.44
TRIM3-206ENST00000528227 TMEM78Q5T7P6 136 aa17.79■□□□□ 0.44
TRIM3-206ENST00000528227 PRR9Q5T870 116 aa17.79■□□□□ 0.44
TRIM3-206ENST00000528227 FAM122CQ6P4D5 195 aa17.79■□□□□ 0.44
TRIM3-206ENST00000528227 OR5C1Q8NGR4 320 aa17.79■□□□□ 0.44
TRIM3-206ENST00000528227 NBEAP1P0C6P0 100 aa17.78■□□□□ 0.44
TRIM3-206ENST00000528227 MZT2BQ6NZ67 158 aa17.78■□□□□ 0.44
TRIM3-206ENST00000528227 ZNF492Q9P255 531 aa17.78■□□□□ 0.44
TRIM3-206ENST00000528227 TP53TG3Q9ULZ0 132 aa17.78■□□□□ 0.44
TRIM3-206ENST00000528227 RGS13O14921 159 aa17.77■□□□□ 0.44
TRIM3-206ENST00000528227 KRTAP10-2P60368 255 aa17.77■□□□□ 0.44
TRIM3-206ENST00000528227 Q6ZQT7 251 aa17.77■□□□□ 0.44
TRIM3-206ENST00000528227 OR51M1Q9H341 326 aa17.77■□□□□ 0.44
TRIM3-206ENST00000528227 ASAH1Q13510 395 aa17.76■□□□□ 0.43
TRIM3-206ENST00000528227 ST6GAL2Q96JF0 529 aa17.76■□□□□ 0.43
TRIM3-206ENST00000528227 SLC25A31Q9H0C2 315 aa17.76■□□□□ 0.43
TRIM3-206ENST00000528227 IGHV1OR15-1A0A075B7D0 117 aa17.75■□□□□ 0.43
TRIM3-206ENST00000528227 E5RGE8 158 aa17.75■□□□□ 0.43
TRIM3-206ENST00000528227 SIX6O95475 246 aa17.75■□□□□ 0.43
TRIM3-206ENST00000528227 FXYD5Q96DB9 178 aa17.75■□□□□ 0.43
TRIM3-206ENST00000528227 MRPL32Q9BYC8 188 aaKnown RBP17.75■□□□□ 0.43
TRIM3-206ENST00000528227 OR5AC2Q9NZP5 309 aa17.75■□□□□ 0.43
TRIM3-206ENST00000528227 OR10J4P0C629 311 aa17.74■□□□□ 0.43
TRIM3-206ENST00000528227 LINC00315P59091 139 aa17.74■□□□□ 0.43
TRIM3-206ENST00000528227 PAXXQ9BUH6 204 aa17.74■□□□□ 0.43
TRIM3-206ENST00000528227 WDR61Q9GZS3 305 aaKnown RBP17.74■□□□□ 0.43
TRIM3-206ENST00000528227 MRPL16Q9NX20 251 aaKnown RBP17.74■□□□□ 0.43
TRIM3-206ENST00000528227 ICOSQ9Y6W8 199 aa17.74■□□□□ 0.43
TRIM3-206ENST00000528227 SIVA1O15304 175 aa17.73■□□□□ 0.43
TRIM3-206ENST00000528227 PAX4O43316 350 aa17.73■□□□□ 0.43
TRIM3-206ENST00000528227 ZNF138P52744 262 aa17.73■□□□□ 0.43
TRIM3-206ENST00000528227 LINC00299Q6ZSB3 139 aa17.73■□□□□ 0.43
TRIM3-206ENST00000528227 PHYHIPLQ96FC7 376 aa17.73■□□□□ 0.43
TRIM3-206ENST00000528227 NMES1Q9C002 83 aa17.73■□□□□ 0.43
TRIM3-206ENST00000528227 KCNIP2Q9NS61 270 aa17.73■□□□□ 0.43
TRIM3-206ENST00000528227 TRBV7-9A0A0J9YWB2 115 aa17.72■□□□□ 0.43
TRIM3-206ENST00000528227 H0YIZ8 118 aa17.72■□□□□ 0.43
TRIM3-206ENST00000528227 IGHV3-53P01767 116 aa17.72■□□□□ 0.43
TRIM3-206ENST00000528227 LRRC37A5PQ49AS3 106 aa17.72■□□□□ 0.43
TRIM3-206ENST00000528227 Q6ZRN7 208 aaPredicted RBP17.72■□□□□ 0.43
TRIM3-206ENST00000528227 Q8N1X5 172 aa17.72■□□□□ 0.43
TRIM3-206ENST00000528227 Q8TAT8 98 aa17.72■□□□□ 0.43
TRIM3-206ENST00000528227 ARPC5LQ9BPX5 153 aa17.72■□□□□ 0.43
TRIM3-206ENST00000528227 APOBP04114 4563 aaKnown RBP17.72■□□□□ 0.43
TRIM3-206ENST00000528227 PRO0255Q9UI72 69 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms