RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 WFDC1Q9HC57 220 aa10.99□□□□□ -0.65
CAPN1-213ENST00000527897 RNASE4P34096 147 aaKnown RBP10.98□□□□□ -0.65
CAPN1-213ENST00000527897 RANP62826 216 aaKnown RBP10.98□□□□□ -0.65
CAPN1-213ENST00000527897 BTN1A1Q13410 526 aa10.98□□□□□ -0.65
CAPN1-213ENST00000527897 TMEM78Q5T7P6 136 aa10.98□□□□□ -0.65
CAPN1-213ENST00000527897 RNASE8Q8TDE3 154 aaKnown RBP10.98□□□□□ -0.65
CAPN1-213ENST00000527897 LINC00477Q96M19 166 aa10.98□□□□□ -0.65
CAPN1-213ENST00000527897 VGLL1Q99990 258 aa10.98□□□□□ -0.65
CAPN1-213ENST00000527897 C7orf71A4D174 169 aa10.97□□□□□ -0.65
CAPN1-213ENST00000527897 SNURFLB1AK76 121 aa10.97□□□□□ -0.65
CAPN1-213ENST00000527897 M0R2N4 97 aa10.97□□□□□ -0.65
CAPN1-213ENST00000527897 SLC25A5P05141 298 aaKnown RBP10.97□□□□□ -0.65
CAPN1-213ENST00000527897 ATP5G1P05496 136 aa10.97□□□□□ -0.65
CAPN1-213ENST00000527897 ATP5G3P48201 142 aa10.97□□□□□ -0.65
CAPN1-213ENST00000527897 TAS2R45P59539 299 aa10.97□□□□□ -0.65
CAPN1-213ENST00000527897 ACOT6Q3I5F7 207 aaPredicted RBP10.97□□□□□ -0.65
CAPN1-213ENST00000527897 KHDC3LQ587J8 217 aa10.97□□□□□ -0.65
CAPN1-213ENST00000527897 CBY3A6NI87 242 aa10.96□□□□□ -0.65
CAPN1-213ENST00000527897 GPX1P07203 203 aa10.96□□□□□ -0.65
CAPN1-213ENST00000527897 CSN1S1P47710 185 aa10.96□□□□□ -0.65
CAPN1-213ENST00000527897 CD300CQ08708 224 aa10.96□□□□□ -0.65
CAPN1-213ENST00000527897 ZNF503Q96F45 646 aa10.96□□□□□ -0.65
CAPN1-213ENST00000527897 PYGO2Q9BRQ0 406 aa10.96□□□□□ -0.65
CAPN1-213ENST00000527897 Q9H3A6 140 aa10.96□□□□□ -0.65
CAPN1-213ENST00000527897 IGLV2-18A0A075B6J9 118 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 A0A1W2PPV4 95 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 GAGE12BA1L429 117 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 HMGB3O15347 200 aaKnown RBP10.95□□□□□ -0.66
CAPN1-213ENST00000527897 GAGE7O76087 117 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 NUDT3O95989 172 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 GAGE12FP0CL80 117 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 GAGE12GP0CL81 117 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 GAGE12IP0CL82 117 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 C9orf47Q6ZRZ4 202 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 C15orf53Q8NAA6 179 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 HSD17B11Q8NBQ5 300 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 Q8TAT8 98 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 HYLS1Q96M11 299 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 RPH3ALQ9UNE2 315 aa10.95□□□□□ -0.66
CAPN1-213ENST00000527897 M6PRP20645 277 aa10.94□□□□□ -0.66
CAPN1-213ENST00000527897 RAB2AP61019 212 aa10.94□□□□□ -0.66
CAPN1-213ENST00000527897 ATG101Q9BSB4 218 aa10.94□□□□□ -0.66
CAPN1-213ENST00000527897 KLLNB2CW77 178 aa10.93□□□□□ -0.66
CAPN1-213ENST00000527897 ZNF138P52744 262 aa10.93□□□□□ -0.66
CAPN1-213ENST00000527897 OR5I1Q13606 314 aa10.93□□□□□ -0.66
CAPN1-213ENST00000527897 Q5BKY6 102 aa10.93□□□□□ -0.66
CAPN1-213ENST00000527897 PRR9Q5T870 116 aa10.93□□□□□ -0.66
CAPN1-213ENST00000527897 OR10G4Q8NGN3 311 aa10.93□□□□□ -0.66
CAPN1-213ENST00000527897 OR10G9Q8NGN4 311 aa10.93□□□□□ -0.66
CAPN1-213ENST00000527897 OR10G7Q8NGN6 311 aa10.93□□□□□ -0.66
CAPN1-213ENST00000527897 FAM19A4Q96LR4 140 aa10.93□□□□□ -0.66
CAPN1-213ENST00000527897 GSN-AS1Q9NRJ2 163 aa10.93□□□□□ -0.66
CAPN1-213ENST00000527897 ZNF492Q9P255 531 aa10.93□□□□□ -0.66
CAPN1-213ENST00000527897 RGS13O14921 159 aa10.92□□□□□ -0.66
CAPN1-213ENST00000527897 GIPP09681 153 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-213ENST00000527897 ZNF266Q14584 549 aa10.92□□□□□ -0.66
CAPN1-213ENST00000527897 LYPD1Q8N2G4 141 aa10.92□□□□□ -0.66
CAPN1-213ENST00000527897 EIF4E3Q8N5X7 224 aaKnown RBP10.92□□□□□ -0.66
CAPN1-213ENST00000527897 ZFAND2AQ8N6M9 145 aa10.92□□□□□ -0.66
CAPN1-213ENST00000527897 FXYD6-FXYD2A0A087WZ82 144 aa10.91□□□□□ -0.66
CAPN1-213ENST00000527897 PGPA6NDG6 321 aa10.91□□□□□ -0.66
CAPN1-213ENST00000527897 ZNF324O75467 553 aaPredicted RBP10.91□□□□□ -0.66
CAPN1-213ENST00000527897 CRISP2P16562 243 aa10.91□□□□□ -0.66
CAPN1-213ENST00000527897 RGS21Q2M5E4 152 aa10.91□□□□□ -0.66
CAPN1-213ENST00000527897 Q6ZQT7 251 aa10.91□□□□□ -0.66
CAPN1-213ENST00000527897 Q6ZTI0 123 aa10.91□□□□□ -0.66
CAPN1-213ENST00000527897 INO80EQ8NBZ0 244 aaPredicted RBP10.91□□□□□ -0.66
CAPN1-213ENST00000527897 ZNF680Q8NEM1 530 aa10.91□□□□□ -0.66
CAPN1-213ENST00000527897 CMTM2Q8TAZ6 248 aa10.91□□□□□ -0.66
CAPN1-213ENST00000527897 AQP10Q96PS8 301 aa10.91□□□□□ -0.66
CAPN1-213ENST00000527897 NACAE9PAV3 2078 aa10.9□□□□□ -0.66
CAPN1-213ENST00000527897 A0A0J9YY99 117 aa10.9□□□□□ -0.66
CAPN1-213ENST00000527897 CDC34P49427 236 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-213ENST00000527897 RNF212Q495C1 297 aa10.9□□□□□ -0.66
CAPN1-213ENST00000527897 FAM74A1Q5RGS3 127 aa10.9□□□□□ -0.66
CAPN1-213ENST00000527897 PQLC2Q6ZP29 291 aa10.9□□□□□ -0.66
CAPN1-213ENST00000527897 ARPC5LQ9BPX5 153 aa10.9□□□□□ -0.66
CAPN1-213ENST00000527897 TP53TG3Q9ULZ0 132 aa10.9□□□□□ -0.66
CAPN1-213ENST00000527897 TRGV2A0A075B6R0 118 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 TRAV26-1A0A087WT03 109 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 TRGV1A0A0A0MS02 117 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 DIRC3C9JPN6 131 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 NMBP08949 121 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 ARL14EPLP0DKL9 152 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 ATP6V0CP27449 155 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 MUC21Q5SSG8 566 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 RXFP4Q8TDU9 374 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 GNPNAT1Q96EK6 184 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-213ENST00000527897 SH3BGRL3Q9H299 93 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 TMPRSS5Q9H3S3 457 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 OTORQ9NRC9 128 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 KLF12Q9Y4X4 402 aa10.89□□□□□ -0.67
CAPN1-213ENST00000527897 IGHV1OR15-1A0A075B7D0 117 aa10.88□□□□□ -0.67
CAPN1-213ENST00000527897 RBAKDNA6NC62 111 aa10.88□□□□□ -0.67
CAPN1-213ENST00000527897 DAZ2Q13117 558 aaKnown RBP10.88□□□□□ -0.67
CAPN1-213ENST00000527897 ANXA2RQ3ZCQ2 193 aa10.88□□□□□ -0.67
CAPN1-213ENST00000527897 GOLT1AQ6ZVE7 132 aa10.88□□□□□ -0.67
CAPN1-213ENST00000527897 LINC00612Q8N6U2 182 aa10.88□□□□□ -0.67
CAPN1-213ENST00000527897 C11orf72Q8NBR9 251 aa10.88□□□□□ -0.67
CAPN1-213ENST00000527897 OR2T35Q8NGX2 323 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms