RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 IGHG4P01861 327 aa13.29□□□□□ -0.28
PCDHA6-202ENST00000527624 C3orf79P0CE67 100 aa13.29□□□□□ -0.28
PCDHA6-202ENST00000527624 KRTAP1-3Q8IUG1 177 aa13.29□□□□□ -0.28
PCDHA6-202ENST00000527624 C8orf49Q96NF6 230 aa13.29□□□□□ -0.28
PCDHA6-202ENST00000527624 H3BUA1 57 aa13.29□□□□□ -0.28
PCDHA6-202ENST00000527624 RAB9AP51151 201 aa13.29□□□□□ -0.28
PCDHA6-202ENST00000527624 C16orf54Q6UWD8 224 aa13.29□□□□□ -0.28
PCDHA6-202ENST00000527624 UNQ9165/PRO28630Q6UXU0 137 aa13.29□□□□□ -0.28
PCDHA6-202ENST00000527624 MIEN1Q9BRT3 115 aa13.29□□□□□ -0.28
PCDHA6-202ENST00000527624 HSBP1O75506 76 aa13.28□□□□□ -0.28
PCDHA6-202ENST00000527624 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.28□□□□□ -0.28
PCDHA6-202ENST00000527624 RNF182Q8N6D2 247 aa13.28□□□□□ -0.28
PCDHA6-202ENST00000527624 USMG5Q96IX5 58 aa13.28□□□□□ -0.28
PCDHA6-202ENST00000527624 ATP6V0BQ99437 205 aa13.28□□□□□ -0.28
PCDHA6-202ENST00000527624 FSHBP01225 129 aa13.28□□□□□ -0.28
PCDHA6-202ENST00000527624 IGLV1-40P01703 118 aa13.28□□□□□ -0.28
PCDHA6-202ENST00000527624 PLA2G2AP14555 144 aa13.28□□□□□ -0.28
PCDHA6-202ENST00000527624 PRR31Q5SQ13 230 aa13.28□□□□□ -0.28
PCDHA6-202ENST00000527624 BORCS7Q96B45 105 aa13.28□□□□□ -0.28
PCDHA6-202ENST00000527624 M0R143 59 aa13.27□□□□□ -0.28
PCDHA6-202ENST00000527624 RAB4AP20338 218 aa13.27□□□□□ -0.28
PCDHA6-202ENST00000527624 FOXA3P55318 350 aaPredicted RBP13.27□□□□□ -0.28
PCDHA6-202ENST00000527624 CFHR3Q02985 330 aa13.27□□□□□ -0.28
PCDHA6-202ENST00000527624 ZNF705AQ6ZN79 300 aaPredicted RBP13.27□□□□□ -0.28
PCDHA6-202ENST00000527624 OR4X2Q8NGF9 303 aa13.27□□□□□ -0.28
PCDHA6-202ENST00000527624 Q8TAT8 98 aa13.27□□□□□ -0.28
PCDHA6-202ENST00000527624 VGLL1Q99990 258 aa13.27□□□□□ -0.28
PCDHA6-202ENST00000527624 TEX15Q9BXT5 2789 aa13.27□□□□□ -0.29
PCDHA6-202ENST00000527624 A0A087X0K7 114 aa13.27□□□□□ -0.29
PCDHA6-202ENST00000527624 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.27□□□□□ -0.29
PCDHA6-202ENST00000527624 CRIP1P50238 77 aa13.27□□□□□ -0.29
PCDHA6-202ENST00000527624 LCN12Q6JVE5 192 aa13.27□□□□□ -0.29
PCDHA6-202ENST00000527624 BRI3O95415 125 aa13.26□□□□□ -0.29
PCDHA6-202ENST00000527624 U3KQE9 123 aa13.26□□□□□ -0.29
PCDHA6-202ENST00000527624 MXRA5Q9NR99 2828 aa13.26□□□□□ -0.29
PCDHA6-202ENST00000527624 PRRC2AP48634 2157 aaKnown RBP13.26□□□□□ -0.29
PCDHA6-202ENST00000527624 CCDC168Q8NDH2 2452 aa13.25□□□□□ -0.29
PCDHA6-202ENST00000527624 SERTM2A0A1B0GWG4 89 aa13.25□□□□□ -0.29
PCDHA6-202ENST00000527624 RNASEKQ6P5S7 137 aaKnown RBP13.25□□□□□ -0.29
PCDHA6-202ENST00000527624 C10orf99Q6UWK7 81 aa13.25□□□□□ -0.29
PCDHA6-202ENST00000527624 PRAC2D3DTV9 90 aa13.25□□□□□ -0.29
PCDHA6-202ENST00000527624 J3QKU1 62 aa13.25□□□□□ -0.29
PCDHA6-202ENST00000527624 M0R2Z0 102 aa13.25□□□□□ -0.29
PCDHA6-202ENST00000527624 HAX1O00165 279 aa13.25□□□□□ -0.29
PCDHA6-202ENST00000527624 CTRLP40313 264 aa13.25□□□□□ -0.29
PCDHA6-202ENST00000527624 URB1-AS1Q96HZ7 61 aa13.25□□□□□ -0.29
PCDHA6-202ENST00000527624 VPREB3Q9UKI3 123 aa13.25□□□□□ -0.29
PCDHA6-202ENST00000527624 CT45A10P0DMU9 189 aa13.24□□□□□ -0.29
PCDHA6-202ENST00000527624 TLN2Q9Y4G6 2542 aa13.24□□□□□ -0.29
PCDHA6-202ENST00000527624 HELZ2Q9BYK8 2649 aaKnown RBP13.24□□□□□ -0.29
PCDHA6-202ENST00000527624 A0A0G2JLM5 398 aa13.24□□□□□ -0.29
PCDHA6-202ENST00000527624 FAM181BA6NEQ2 426 aa13.24□□□□□ -0.29
PCDHA6-202ENST00000527624 NDUFA4O00483 81 aa13.24□□□□□ -0.29
PCDHA6-202ENST00000527624 FAM162BQ5T6X4 162 aa13.24□□□□□ -0.29
PCDHA6-202ENST00000527624 CYB5R2Q6BCY4 276 aa13.24□□□□□ -0.29
PCDHA6-202ENST00000527624 Q6YL49 198 aa13.24□□□□□ -0.29
PCDHA6-202ENST00000527624 WFDC11Q8NEX6 87 aa13.24□□□□□ -0.29
PCDHA6-202ENST00000527624 LOC102724200A0A096LPH7 203 aaPredicted RBP13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 SMAD7O15105 426 aaKnown RBP13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 HOXA3O43365 443 aaPredicted RBP13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 SSTP61278 116 aa13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 NUTF2P61970 127 aaKnown RBP13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 ERCC8Q13216 396 aa13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 C8orf86Q6ZUL3 223 aa13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 C9orf139Q6ZV77 190 aa13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 MRPL52Q86TS9 123 aaKnown RBP13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 NDFIP1Q9BT67 221 aa13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 ITPR3Q14573 2671 aa13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 ZNF469Q96JG9 3925 aaPredicted RBP13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 TRAV8-2A0A0B4J237 113 aa13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 PRSS57Q6UWY2 283 aa13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 PRR25Q96S07 402 aa13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 SLC50A1Q9BRV3 221 aa13.23□□□□□ -0.29
PCDHA6-202ENST00000527624 SPATA45Q537H7 98 aa13.22□□□□□ -0.29
PCDHA6-202ENST00000527624 EBLN2Q6P2I7 272 aa13.22□□□□□ -0.29
PCDHA6-202ENST00000527624 ARL6IP6Q8N6S5 226 aa13.22□□□□□ -0.29
PCDHA6-202ENST00000527624 PSMG3-AS1Q96PY0 264 aa13.22□□□□□ -0.29
PCDHA6-202ENST00000527624 A0A1B0GUT8 65 aa13.21□□□□□ -0.29
PCDHA6-202ENST00000527624 PSMB8P28062 276 aa13.21□□□□□ -0.29
PCDHA6-202ENST00000527624 GLMPQ8WWB7 406 aa13.21□□□□□ -0.29
PCDHA6-202ENST00000527624 DUX5Q96PT3 197 aa13.21□□□□□ -0.29
PCDHA6-202ENST00000527624 TMSB15BA0A087X1C1 80 aa13.21□□□□□ -0.29
PCDHA6-202ENST00000527624 C2orf70A6NJV1 201 aa13.21□□□□□ -0.29
PCDHA6-202ENST00000527624 SH2D1AO60880 128 aa13.21□□□□□ -0.29
PCDHA6-202ENST00000527624 SAPCD1Q5SSQ6 148 aa13.21□□□□□ -0.29
PCDHA6-202ENST00000527624 IL17RELQ6ZVW7 336 aa13.21□□□□□ -0.29
PCDHA6-202ENST00000527624 NPFFR1Q9GZQ6 430 aa13.21□□□□□ -0.29
PCDHA6-202ENST00000527624 SELENOKQ9Y6D0 94 aa13.21□□□□□ -0.29
PCDHA6-202ENST00000527624 ARMS2P0C7Q2 107 aa13.2□□□□□ -0.3
PCDHA6-202ENST00000527624 BTF3P20290 206 aaKnown RBP13.2□□□□□ -0.3
PCDHA6-202ENST00000527624 CHCHD1Q96BP2 118 aaKnown RBP13.2□□□□□ -0.3
PCDHA6-202ENST00000527624 TPPP3Q9BW30 176 aa13.2□□□□□ -0.3
PCDHA6-202ENST00000527624 ZNF580Q9UK33 172 aa13.2□□□□□ -0.3
PCDHA6-202ENST00000527624 M0QZ24 198 aa13.2□□□□□ -0.3
PCDHA6-202ENST00000527624 PMCHL1Q16048 86 aa13.2□□□□□ -0.3
PCDHA6-202ENST00000527624 ZNF80P51504 273 aaPredicted RBP13.19□□□□□ -0.3
PCDHA6-202ENST00000527624 RIGQ13278 110 aa13.19□□□□□ -0.3
PCDHA6-202ENST00000527624 TM4SF20Q53R12 229 aa13.19□□□□□ -0.3
PCDHA6-202ENST00000527624 C16orf92Q96LL3 132 aa13.19□□□□□ -0.3
PCDHA6-202ENST00000527624 LINC00614P0C842 121 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms