RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 GRAMD2BQ96HH9 432 aa14.27□□□□□ -0.12
SMPD1-203ENST00000527275 TRAPPC1Q9Y5R8 145 aa14.27□□□□□ -0.12
SMPD1-203ENST00000527275 A0A087X0K7 114 aa14.27□□□□□ -0.13
SMPD1-203ENST00000527275 TCL1AP56279 114 aa14.27□□□□□ -0.13
SMPD1-203ENST00000527275 LINC00322Q6ZN03 302 aaPredicted RBP14.27□□□□□ -0.13
SMPD1-203ENST00000527275 CITED1Q99966 193 aa14.27□□□□□ -0.13
SMPD1-203ENST00000527275 ZNF331Q9NQX6 463 aaPredicted RBP14.27□□□□□ -0.13
SMPD1-203ENST00000527275 PSG8Q9UQ74 426 aa14.27□□□□□ -0.13
SMPD1-203ENST00000527275 STAB1Q9NY15 2570 aa14.27□□□□□ -0.13
SMPD1-203ENST00000527275 KLF5Q13887 457 aaPredicted RBP14.26□□□□□ -0.13
SMPD1-203ENST00000527275 TM4SF20Q53R12 229 aa14.26□□□□□ -0.13
SMPD1-203ENST00000527275 ARL6IP6Q8N6S5 226 aa14.26□□□□□ -0.13
SMPD1-203ENST00000527275 ZNF492Q9P255 531 aa14.26□□□□□ -0.13
SMPD1-203ENST00000527275 ZFP30Q9Y2G7 519 aa14.26□□□□□ -0.13
SMPD1-203ENST00000527275 SERTM2A0A1B0GWG4 89 aa14.26□□□□□ -0.13
SMPD1-203ENST00000527275 HOXA5P20719 270 aa14.26□□□□□ -0.13
SMPD1-203ENST00000527275 FHL3Q13643 280 aa14.26□□□□□ -0.13
SMPD1-203ENST00000527275 IGFL4Q6B9Z1 124 aa14.26□□□□□ -0.13
SMPD1-203ENST00000527275 LURAP1LQ8IV03 231 aa14.26□□□□□ -0.13
SMPD1-203ENST00000527275 DAZ1Q9NQZ3 744 aaKnown RBP14.26□□□□□ -0.13
SMPD1-203ENST00000527275 RPL19P84098 196 aaKnown RBP14.25□□□□□ -0.13
SMPD1-203ENST00000527275 TMEM158Q8WZ71 300 aa14.25□□□□□ -0.13
SMPD1-203ENST00000527275 DAZAP1Q96EP5 407 aaKnown RBP14.25□□□□□ -0.13
SMPD1-203ENST00000527275 C19orf71A6NCJ1 209 aa14.24□□□□□ -0.13
SMPD1-203ENST00000527275 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.24□□□□□ -0.13
SMPD1-203ENST00000527275 DLX4Q92988 240 aaPredicted RBP14.24□□□□□ -0.13
SMPD1-203ENST00000527275 SPINK4O60575 86 aa14.24□□□□□ -0.13
SMPD1-203ENST00000527275 EDN2P20800 178 aa14.24□□□□□ -0.13
SMPD1-203ENST00000527275 LGALS9O00182 355 aa14.23□□□□□ -0.13
SMPD1-203ENST00000527275 P01737 135 aa14.23□□□□□ -0.13
SMPD1-203ENST00000527275 HLA-DMBP28068 263 aa14.23□□□□□ -0.13
SMPD1-203ENST00000527275 C16orf54Q6UWD8 224 aa14.23□□□□□ -0.13
SMPD1-203ENST00000527275 TMEM213A2RRL7 107 aa14.23□□□□□ -0.13
SMPD1-203ENST00000527275 IZUMO1RA6ND01 250 aa14.23□□□□□ -0.13
SMPD1-203ENST00000527275 CHEK1O14757 476 aa14.23□□□□□ -0.13
SMPD1-203ENST00000527275 FRMD6-AS1P0C7T7 363 aa14.23□□□□□ -0.13
SMPD1-203ENST00000527275 REC114Q7Z4M0 266 aa14.23□□□□□ -0.13
SMPD1-203ENST00000527275 TSKUQ8WUA8 353 aa14.23□□□□□ -0.13
SMPD1-203ENST00000527275 ASCL2Q99929 193 aa14.23□□□□□ -0.13
SMPD1-203ENST00000527275 RPP21Q9H633 154 aaKnown RBP14.23□□□□□ -0.13
SMPD1-203ENST00000527275 UFC1Q9Y3C8 167 aa14.23□□□□□ -0.13
SMPD1-203ENST00000527275 K7EMT4 169 aa14.22□□□□□ -0.13
SMPD1-203ENST00000527275 CBLN1P23435 193 aa14.22□□□□□ -0.13
SMPD1-203ENST00000527275 LCN12Q6JVE5 192 aa14.22□□□□□ -0.13
SMPD1-203ENST00000527275 SLC50A1Q9BRV3 221 aa14.22□□□□□ -0.13
SMPD1-203ENST00000527275 IGKV2-40A0A087WW87 121 aaPredicted RBP14.22□□□□□ -0.13
SMPD1-203ENST00000527275 ZNF705FA8MVS1 300 aaPredicted RBP14.22□□□□□ -0.13
SMPD1-203ENST00000527275 A8MWP6 167 aa14.22□□□□□ -0.13
SMPD1-203ENST00000527275 IGKV2D-40P01614 121 aaPredicted RBP14.22□□□□□ -0.13
SMPD1-203ENST00000527275 S100A8P05109 93 aa14.22□□□□□ -0.13
SMPD1-203ENST00000527275 GBGT1Q8N5D6 347 aa14.22□□□□□ -0.13
SMPD1-203ENST00000527275 ZC2HC1AQ96GY0 325 aa14.22□□□□□ -0.13
SMPD1-203ENST00000527275 NAT8BQ9UHF3 227 aa14.21□□□□□ -0.13
SMPD1-203ENST00000527275 VWFP04275 2813 aa14.21□□□□□ -0.14
SMPD1-203ENST00000527275 IGHV7-4-1A0A0J9YVY3 117 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 CT83Q5H943 113 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 NUP35Q8NFH5 326 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 OR9G4Q8NGQ1 327 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 GLMPQ8WWB7 406 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 GNB1LQ9BYB4 327 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 A8MWL6 223 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 SNURFLB1AK76 121 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 GFI1BQ5VTD9 330 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 MRPL54Q6P161 138 aaKnown RBP14.2□□□□□ -0.14
SMPD1-203ENST00000527275 C3orf56Q8N813 242 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 NEU1Q99519 415 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 RHPN1-AS1Q9BWJ2 59 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 MRPL18Q9H0U6 180 aaKnown RBP14.2□□□□□ -0.14
SMPD1-203ENST00000527275 SMPXQ9UHP9 88 aa14.2□□□□□ -0.14
SMPD1-203ENST00000527275 FBLL1A6NHQ2 334 aaKnown RBP14.19□□□□□ -0.14
SMPD1-203ENST00000527275 SMIM6P0DI80 62 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 COX19Q49B96 90 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 RNF182Q8N6D2 247 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 SELENOKQ9Y6D0 94 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 TRRAPQ9Y4A5 3859 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 XKRY2A2RUG3 117 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 C2orf70A6NJV1 201 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 HIGD1CA8MV81 97 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 NPIPB6E9PJ23 425 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 WDR73Q6P4I2 378 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 C8orf49Q96NF6 230 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 VGLL1Q99990 258 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 ZNF747Q9BV97 191 aa14.19□□□□□ -0.14
SMPD1-203ENST00000527275 TRAV8-2A0A0B4J237 113 aa14.18□□□□□ -0.14
SMPD1-203ENST00000527275 A0A1W2PS18 150 aa14.18□□□□□ -0.14
SMPD1-203ENST00000527275 SAPCD1Q5SSQ6 148 aa14.18□□□□□ -0.14
SMPD1-203ENST00000527275 C12orf54Q6X4T0 127 aa14.18□□□□□ -0.14
SMPD1-203ENST00000527275 OR4B1Q8NGF8 309 aa14.18□□□□□ -0.14
SMPD1-203ENST00000527275 PEMTQ9UBM1 199 aa14.18□□□□□ -0.14
SMPD1-203ENST00000527275 CRIP1P50238 77 aa14.17□□□□□ -0.14
SMPD1-203ENST00000527275 HIST3H2BBQ8N257 126 aa14.17□□□□□ -0.14
SMPD1-203ENST00000527275 IFITM10A6NMD0 228 aa14.17□□□□□ -0.14
SMPD1-203ENST00000527275 PRAC2D3DTV9 90 aa14.17□□□□□ -0.14
SMPD1-203ENST00000527275 S100A12P80511 92 aa14.17□□□□□ -0.14
SMPD1-203ENST00000527275 ADAMTSL5Q6ZMM2 481 aa14.17□□□□□ -0.14
SMPD1-203ENST00000527275 TMEM136Q6ZRR5 245 aa14.17□□□□□ -0.14
SMPD1-203ENST00000527275 TCF24Q7RTU0 167 aa14.17□□□□□ -0.14
SMPD1-203ENST00000527275 OR2D3Q8NGH3 330 aa14.17□□□□□ -0.14
SMPD1-203ENST00000527275 PRR25Q96S07 402 aa14.17□□□□□ -0.14
SMPD1-203ENST00000527275 OVOL1O14753 267 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms