RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 FAM3BP58499 235 aaPredicted RBP9.47□□□□□ -0.89
CAPN1-207ENST00000527189 TMEM88Q6PEY1 159 aa9.47□□□□□ -0.89
CAPN1-207ENST00000527189 UBE2DNLQ8IWF7 75 aa9.47□□□□□ -0.89
CAPN1-207ENST00000527189 C16orf74Q96GX8 76 aa9.47□□□□□ -0.89
CAPN1-207ENST00000527189 SLC39A9Q9NUM3 307 aa9.47□□□□□ -0.89
CAPN1-207ENST00000527189 TIMM8BQ9Y5J9 83 aaPredicted RBP9.47□□□□□ -0.89
CAPN1-207ENST00000527189 IGSF23A1L1A6 192 aa9.46□□□□□ -0.9
CAPN1-207ENST00000527189 LINC00862A6NCI5 91 aa9.46□□□□□ -0.9
CAPN1-207ENST00000527189 H3BQ15 152 aa9.46□□□□□ -0.9
CAPN1-207ENST00000527189 PRM2P04554 102 aa9.46□□□□□ -0.9
CAPN1-207ENST00000527189 DEFB130BP0DP73 79 aa9.46□□□□□ -0.9
CAPN1-207ENST00000527189 DEFB130AP0DP74 79 aa9.46□□□□□ -0.9
CAPN1-207ENST00000527189 BLOC1S1P78537 153 aa9.46□□□□□ -0.9
CAPN1-207ENST00000527189 SCGB1C1Q8TD33 95 aa9.46□□□□□ -0.9
CAPN1-207ENST00000527189 GNPNAT1Q96EK6 184 aaPredicted RBP9.46□□□□□ -0.9
CAPN1-207ENST00000527189 MRPL53Q96EL3 112 aaKnown RBP9.46□□□□□ -0.9
CAPN1-207ENST00000527189 ODF3Q96PU9 254 aa9.46□□□□□ -0.9
CAPN1-207ENST00000527189 SMIM3Q9BZL3 60 aa9.46□□□□□ -0.9
CAPN1-207ENST00000527189 TMEM14CQ9P0S9 112 aa9.46□□□□□ -0.9
CAPN1-207ENST00000527189 UBE2L5PA0A1B0GUS4 154 aa9.45□□□□□ -0.9
CAPN1-207ENST00000527189 SLC17A3O00476 420 aa9.45□□□□□ -0.9
CAPN1-207ENST00000527189 ATP5G1P05496 136 aa9.45□□□□□ -0.9
CAPN1-207ENST00000527189 SNRPCP09234 159 aaKnown RBP9.45□□□□□ -0.9
CAPN1-207ENST00000527189 ATP5G3P48201 142 aa9.45□□□□□ -0.9
CAPN1-207ENST00000527189 RAB5CP51148 216 aa9.45□□□□□ -0.9
CAPN1-207ENST00000527189 RAB2AP61019 212 aa9.45□□□□□ -0.9
CAPN1-207ENST00000527189 COMMD7Q86VX2 200 aa9.45□□□□□ -0.9
CAPN1-207ENST00000527189 RNASE8Q8TDE3 154 aaKnown RBP9.45□□□□□ -0.9
CAPN1-207ENST00000527189 TMEM263Q8WUH6 116 aaKnown RBP9.45□□□□□ -0.9
CAPN1-207ENST00000527189 DNAH17Q9UFH2 4485 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 TRBV19A0A075B6N1 114 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 TRAV5A0A0B4J249 113 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 PRAC2D3DTV9 90 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 TEX46H3BTG2 121 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 HIST1H1EP10412 219 aaKnown RBP9.44□□□□□ -0.9
CAPN1-207ENST00000527189 HTN1P15515 57 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 FGF7P21781 194 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 PDE6HQ13956 83 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 CCDC28AQ8IWP9 274 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 SLC7A5P1Q8MH63 180 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 ATP5SQ99766 215 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 MED9Q9NWA0 146 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 ZNF586Q9NXT0 402 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 PRELID1Q9Y255 219 aa9.44□□□□□ -0.9
CAPN1-207ENST00000527189 NPIPB6E9PJ23 425 aa9.43□□□□□ -0.9
CAPN1-207ENST00000527189 H3BTX0 84 aa9.43□□□□□ -0.9
CAPN1-207ENST00000527189 SEC11BP0C7V7 166 aa9.43□□□□□ -0.9
CAPN1-207ENST00000527189 LEPP41159 167 aa9.43□□□□□ -0.9
CAPN1-207ENST00000527189 RPL7L1Q6DKI1 246 aaKnown RBP9.43□□□□□ -0.9
CAPN1-207ENST00000527189 Q6ZR54 194 aa9.43□□□□□ -0.9
CAPN1-207ENST00000527189 OR5C1Q8NGR4 320 aa9.43□□□□□ -0.9
CAPN1-207ENST00000527189 TMED6Q8WW62 240 aa9.43□□□□□ -0.9
CAPN1-207ENST00000527189 NPCDR1Q9BY65 106 aa9.43□□□□□ -0.9
CAPN1-207ENST00000527189 HSPG2P98160 4391 aa9.43□□□□□ -0.9
CAPN1-207ENST00000527189 UMAD1C9J7I0 102 aa9.42□□□□□ -0.9
CAPN1-207ENST00000527189 F5H768 121 aa9.42□□□□□ -0.9
CAPN1-207ENST00000527189 M0R2N4 97 aa9.42□□□□□ -0.9
CAPN1-207ENST00000527189 CT45A10P0DMU9 189 aa9.42□□□□□ -0.9
CAPN1-207ENST00000527189 NHLH2Q02577 135 aa9.42□□□□□ -0.9
CAPN1-207ENST00000527189 CLINT1Q14677 625 aa9.42□□□□□ -0.9
CAPN1-207ENST00000527189 SOHLH1Q5JUK2 328 aa9.42□□□□□ -0.9
CAPN1-207ENST00000527189 GFI1BQ5VTD9 330 aa9.42□□□□□ -0.9
CAPN1-207ENST00000527189 LINC00477Q96M19 166 aa9.42□□□□□ -0.9
CAPN1-207ENST00000527189 PYGO2Q9BRQ0 406 aa9.42□□□□□ -0.9
CAPN1-207ENST00000527189 NOP10Q9NPE3 64 aaKnown RBP9.42□□□□□ -0.9
CAPN1-207ENST00000527189 A0A1B0GVY2 172 aa9.41□□□□□ -0.9
CAPN1-207ENST00000527189 PRSS29PA6NIE9 313 aa9.41□□□□□ -0.9
CAPN1-207ENST00000527189 RTL8CO15255 209 aa9.41□□□□□ -0.9
CAPN1-207ENST00000527189 NMBP08949 121 aa9.41□□□□□ -0.9
CAPN1-207ENST00000527189 KIR3DS1Q14943 382 aa9.41□□□□□ -0.9
CAPN1-207ENST00000527189 AKR1C8PQ5T2L2 129 aa9.41□□□□□ -0.9
CAPN1-207ENST00000527189 LINC00612Q8N6U2 182 aa9.41□□□□□ -0.9
CAPN1-207ENST00000527189 ATG101Q9BSB4 218 aa9.41□□□□□ -0.9
CAPN1-207ENST00000527189 CYTL1Q9NRR1 136 aa9.41□□□□□ -0.9
CAPN1-207ENST00000527189 KCNIP2Q9NS61 270 aa9.41□□□□□ -0.9
CAPN1-207ENST00000527189 TIMM9Q9Y5J7 89 aa9.41□□□□□ -0.9
CAPN1-207ENST00000527189 PKD1P98161 4303 aa9.41□□□□□ -0.9
CAPN1-207ENST00000527189 IGLV2-18A0A075B6J9 118 aa9.4□□□□□ -0.9
CAPN1-207ENST00000527189 SNURFLB1AK76 121 aa9.4□□□□□ -0.9
CAPN1-207ENST00000527189 C17orf112F2Z3M2 114 aa9.4□□□□□ -0.9
CAPN1-207ENST00000527189 NDUFB4O95168 129 aa9.4□□□□□ -0.9
CAPN1-207ENST00000527189 SLC25A5P05141 298 aaKnown RBP9.4□□□□□ -0.9
CAPN1-207ENST00000527189 PRB4P10163 310 aaPredicted RBP9.4□□□□□ -0.9
CAPN1-207ENST00000527189 SULT1A2P50226 295 aa9.4□□□□□ -0.9
CAPN1-207ENST00000527189 PARD6GQ9BYG4 376 aaPredicted RBP9.4□□□□□ -0.9
CAPN1-207ENST00000527189 AAMDCQ9H7C9 122 aa9.4□□□□□ -0.9
CAPN1-207ENST00000527189 TRAV12-3A0A0B4J271 114 aa9.39□□□□□ -0.91
CAPN1-207ENST00000527189 CCL18P55774 89 aa9.39□□□□□ -0.91
CAPN1-207ENST00000527189 DAZ2Q13117 558 aaKnown RBP9.39□□□□□ -0.91
CAPN1-207ENST00000527189 FAM74A1Q5RGS3 127 aa9.39□□□□□ -0.91
CAPN1-207ENST00000527189 UQCC3Q6UW78 93 aa9.39□□□□□ -0.91
CAPN1-207ENST00000527189 DPPA3Q6W0C5 159 aa9.39□□□□□ -0.91
CAPN1-207ENST00000527189 C9orf47Q6ZRZ4 202 aa9.39□□□□□ -0.91
CAPN1-207ENST00000527189 HSD17B11Q8NBQ5 300 aa9.39□□□□□ -0.91
CAPN1-207ENST00000527189 OR2G3Q8NGZ4 309 aa9.39□□□□□ -0.91
CAPN1-207ENST00000527189 ZNF503Q96F45 646 aa9.39□□□□□ -0.91
CAPN1-207ENST00000527189 LINC00467Q9BRT7 94 aa9.39□□□□□ -0.91
CAPN1-207ENST00000527189 WDR61Q9GZS3 305 aaKnown RBP9.39□□□□□ -0.91
CAPN1-207ENST00000527189 KLLNB2CW77 178 aa9.38□□□□□ -0.91
CAPN1-207ENST00000527189 H3BNG1 76 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms