RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 RPP21Q9H633 154 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 ZANQ9Y493 2812 aa12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 A0A1B0GXF2 115 aa12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 ZNF207O43670 478 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 HSBP1O75506 76 aa12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 PSMB8P28062 276 aa12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 TDRG1Q3Y452 100 aa12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 SPATA45Q537H7 98 aa12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 PRR27Q6MZM9 219 aa12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 TMEM75Q8N9X5 138 aa12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 MLST8Q9BVC4 326 aa12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 TRBV6-1A0A0K0K1D8 114 aa12.46□□□□□ -0.41
SNRNP35-204ENST00000527158 HIGD1CA8MV81 97 aa12.46□□□□□ -0.41
SNRNP35-204ENST00000527158 CA1P00915 261 aaPredicted RBP12.46□□□□□ -0.41
SNRNP35-204ENST00000527158 C3orf79P0CE67 100 aa12.46□□□□□ -0.41
SNRNP35-204ENST00000527158 HBBP68871 147 aa12.46□□□□□ -0.41
SNRNP35-204ENST00000527158 IL17RELQ6ZVW7 336 aa12.46□□□□□ -0.41
SNRNP35-204ENST00000527158 TRAV8-1A0A0A6YYK1 113 aa12.46□□□□□ -0.42
SNRNP35-204ENST00000527158 IGHV3-66A0A0C4DH42 116 aa12.46□□□□□ -0.42
SNRNP35-204ENST00000527158 SERTM2A0A1B0GWG4 89 aa12.46□□□□□ -0.42
SNRNP35-204ENST00000527158 M0R3E3 92 aa12.46□□□□□ -0.42
SNRNP35-204ENST00000527158 COL5A1-AS1Q5SY13 56 aa12.46□□□□□ -0.42
SNRNP35-204ENST00000527158 PRNTQ86SH4 94 aa12.46□□□□□ -0.42
SNRNP35-204ENST00000527158 Q86TA4 180 aa12.46□□□□□ -0.42
SNRNP35-204ENST00000527158 ARL6IP6Q8N6S5 226 aa12.46□□□□□ -0.42
SNRNP35-204ENST00000527158 ALKBH7Q9BT30 221 aaPredicted RBP12.46□□□□□ -0.42
SNRNP35-204ENST00000527158 U3KQE9 123 aa12.46□□□□□ -0.42
SNRNP35-204ENST00000527158 IGHV3OR16-13A0A075B7E8 117 aa12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 NBPF19A0A087WUL8 3843 aa12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 A0A087X0K7 114 aa12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 IGHV3-74A0A0B4J1X5 117 aa12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 IGLV2-11P01706 119 aa12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 APOHP02749 345 aaPredicted RBP12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 DAZAP1Q96EP5 407 aaKnown RBP12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 ZNF702PQ9H963 129 aa12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 IGHV3-49A0A0A0MS15 119 aa12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 P01737 135 aa12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 PSG3Q16557 428 aa12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 PEF1Q9UBV8 284 aaKnown RBP12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 ZFP30Q9Y2G7 519 aa12.45□□□□□ -0.42
SNRNP35-204ENST00000527158 C19orf71A6NCJ1 209 aa12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 CD5LO43866 347 aa12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 IGLC3P0DOY3 106 aa12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 ZNF25P17030 456 aaPredicted RBP12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 NTF3P20783 257 aa12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 UNQ9165/PRO28630Q6UXU0 137 aa12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 TMEM86BQ8N661 226 aa12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 CHCHD1Q96BP2 118 aaKnown RBP12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 DUX5Q96PT3 197 aa12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 SLC50A1Q9BRV3 221 aa12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 PSG8Q9UQ74 426 aa12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 M0R2Z0 102 aa12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 BTF3P20290 206 aaKnown RBP12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 RBPMS2Q6ZRY4 209 aaKnown RBP12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 RNF114Q9Y508 228 aa12.43□□□□□ -0.42
SNRNP35-204ENST00000527158 TEX15Q9BXT5 2789 aa12.42□□□□□ -0.42
SNRNP35-204ENST00000527158 FAM181BA6NEQ2 426 aa12.42□□□□□ -0.42
SNRNP35-204ENST00000527158 FOXE3Q13461 319 aa12.42□□□□□ -0.42
SNRNP35-204ENST00000527158 GDF5OSQ5U4N7 250 aa12.42□□□□□ -0.42
SNRNP35-204ENST00000527158 C16orf54Q6UWD8 224 aa12.42□□□□□ -0.42
SNRNP35-204ENST00000527158 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.42□□□□□ -0.42
SNRNP35-204ENST00000527158 YAE1D1Q9NRH1 226 aa12.42□□□□□ -0.42
SNRNP35-204ENST00000527158 DLEU1O43261 78 aa12.42□□□□□ -0.42
SNRNP35-204ENST00000527158 ELANEP08246 267 aa12.42□□□□□ -0.42
SNRNP35-204ENST00000527158 C10orf99Q6UWK7 81 aa12.42□□□□□ -0.42
SNRNP35-204ENST00000527158 ITPR3Q14573 2671 aa12.41□□□□□ -0.42
SNRNP35-204ENST00000527158 FBLL1A6NHQ2 334 aaKnown RBP12.41□□□□□ -0.42
SNRNP35-204ENST00000527158 NPIPB6E9PJ23 425 aa12.41□□□□□ -0.42
SNRNP35-204ENST00000527158 CHEK1O14757 476 aa12.41□□□□□ -0.42
SNRNP35-204ENST00000527158 HNRNPA3P51991 378 aaKnown RBP12.41□□□□□ -0.42
SNRNP35-204ENST00000527158 FAM106AQ4KMX7 169 aa12.41□□□□□ -0.42
SNRNP35-204ENST00000527158 FAM19A2Q8N3H0 131 aa12.41□□□□□ -0.42
SNRNP35-204ENST00000527158 LINC00614P0C842 121 aa12.4□□□□□ -0.42
SNRNP35-204ENST00000527158 CAMPP49913 170 aa12.4□□□□□ -0.42
SNRNP35-204ENST00000527158 IGFL4Q6B9Z1 124 aa12.4□□□□□ -0.42
SNRNP35-204ENST00000527158 LCN12Q6JVE5 192 aa12.4□□□□□ -0.42
SNRNP35-204ENST00000527158 Q8N2B8 174 aa12.4□□□□□ -0.42
SNRNP35-204ENST00000527158 MRPS16Q9Y3D3 137 aaKnown RBP12.4□□□□□ -0.42
SNRNP35-204ENST00000527158 PDZD2O15018 2839 aa12.4□□□□□ -0.42
SNRNP35-204ENST00000527158 TRAV9-2A0A087WT02 112 aa12.4□□□□□ -0.42
SNRNP35-204ENST00000527158 RNASEKQ6P5S7 137 aaKnown RBP12.4□□□□□ -0.42
SNRNP35-204ENST00000527158 GLMPQ8WWB7 406 aa12.4□□□□□ -0.42
SNRNP35-204ENST00000527158 TMEM208Q9BTX3 173 aa12.4□□□□□ -0.42
SNRNP35-204ENST00000527158 OR5AL1P0C617 328 aa12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 PRB4P10163 310 aaPredicted RBP12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 G0S2P27469 103 aa12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 KRTAP1-1Q07627 177 aa12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 LINC00322Q6ZN03 302 aaPredicted RBP12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 Q6ZN92 141 aa12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 NDFIP1Q9BT67 221 aa12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 CCDC168Q8NDH2 2452 aa12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 IGKV2-40A0A087WW87 121 aaPredicted RBP12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 A0A1B0GW15 77 aa12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 IGKV2D-40P01614 121 aaPredicted RBP12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 HLA-DMBP28068 263 aa12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 GPHB5Q86YW7 130 aa12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 OR2D3Q8NGH3 330 aa12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 DAZ1Q9NQZ3 744 aaKnown RBP12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 GOLT1BQ9Y3E0 138 aa12.39□□□□□ -0.43
SNRNP35-204ENST00000527158 HAX1O00165 279 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms