RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 REG1BP48304 166 aa8.84□□□□□ -0.99
VPS11-202ENST00000526829 TTC32Q5I0X7 151 aa8.84□□□□□ -0.99
VPS11-202ENST00000526829 ZNF502Q8TBZ5 544 aa8.84□□□□□ -0.99
VPS11-202ENST00000526829 ITLN1Q8WWA0 313 aa8.84□□□□□ -0.99
VPS11-202ENST00000526829 HSPB6O14558 160 aa8.83□□□□□ -1
VPS11-202ENST00000526829 MPDU1O75352 247 aa8.83□□□□□ -1
VPS11-202ENST00000526829 HSPE1P61604 102 aaKnown RBP8.83□□□□□ -1
VPS11-202ENST00000526829 CX3CL1P78423 397 aa8.83□□□□□ -1
VPS11-202ENST00000526829 TMEM136Q6ZRR5 245 aa8.83□□□□□ -1
VPS11-202ENST00000526829 ZC2HC1AQ96GY0 325 aa8.83□□□□□ -1
VPS11-202ENST00000526829 C20orf173Q96LM9 149 aa8.83□□□□□ -1
VPS11-202ENST00000526829 VGLL1Q99990 258 aa8.83□□□□□ -1
VPS11-202ENST00000526829 FGF23Q9GZV9 251 aaPredicted RBP8.83□□□□□ -1
VPS11-202ENST00000526829 IL36RNQ9UBH0 155 aa8.83□□□□□ -1
VPS11-202ENST00000526829 V9GYV3 84 aa8.83□□□□□ -1
VPS11-202ENST00000526829 PRSS29PA6NIE9 313 aa8.82□□□□□ -1
VPS11-202ENST00000526829 GATA2P23769 480 aaPredicted RBP8.82□□□□□ -1
VPS11-202ENST00000526829 ZFP36P26651 326 aaKnown RBP8.82□□□□□ -1
VPS11-202ENST00000526829 OPRK1P41145 380 aa8.82□□□□□ -1
VPS11-202ENST00000526829 SPRNQ5BIV9 151 aa8.82□□□□□ -1
VPS11-202ENST00000526829 WNT10AQ9GZT5 417 aa8.82□□□□□ -1
VPS11-202ENST00000526829 FCGR3BO75015 233 aa8.82□□□□□ -1
VPS11-202ENST00000526829 HLA-DQA1P01909 254 aa8.82□□□□□ -1
VPS11-202ENST00000526829 ARL14EPLP0DKL9 152 aa8.82□□□□□ -1
VPS11-202ENST00000526829 SPATA12Q7Z6I5 190 aa8.82□□□□□ -1
VPS11-202ENST00000526829 DRAM1Q8N682 238 aa8.82□□□□□ -1
VPS11-202ENST00000526829 TSKUQ8WUA8 353 aa8.82□□□□□ -1
VPS11-202ENST00000526829 IL1F10Q8WWZ1 152 aa8.82□□□□□ -1
VPS11-202ENST00000526829 RASL10AQ92737 203 aa8.82□□□□□ -1
VPS11-202ENST00000526829 C20orf78Q9BR46 151 aa8.82□□□□□ -1
VPS11-202ENST00000526829 PKD1L1Q8TDX9 2849 aa8.82□□□□□ -1
VPS11-202ENST00000526829 CGB1A6NKQ9 187 aa8.81□□□□□ -1
VPS11-202ENST00000526829 TMEM178BH3BS89 294 aa8.81□□□□□ -1
VPS11-202ENST00000526829 AMY1AP04745 511 aa8.81□□□□□ -1
VPS11-202ENST00000526829 DEFA4P12838 97 aa8.81□□□□□ -1
VPS11-202ENST00000526829 TAL2Q16559 108 aa8.81□□□□□ -1
VPS11-202ENST00000526829 Q6ZR03 302 aa8.81□□□□□ -1
VPS11-202ENST00000526829 DEFB108BQ8NET1 73 aa8.81□□□□□ -1
VPS11-202ENST00000526829 ZNF747Q9BV97 191 aa8.81□□□□□ -1
VPS11-202ENST00000526829 CLEC7AQ9BXN2 247 aa8.81□□□□□ -1
VPS11-202ENST00000526829 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.81□□□□□ -1
VPS11-202ENST00000526829 FRMD6-AS1P0C7T7 363 aa8.81□□□□□ -1
VPS11-202ENST00000526829 GPR183P32249 361 aa8.81□□□□□ -1
VPS11-202ENST00000526829 GAGE2BQ13066 116 aa8.81□□□□□ -1
VPS11-202ENST00000526829 GAGE2EQ4V326 116 aa8.81□□□□□ -1
VPS11-202ENST00000526829 TEX36Q5VZQ5 186 aa8.81□□□□□ -1
VPS11-202ENST00000526829 STHQ8IWL8 128 aa8.81□□□□□ -1
VPS11-202ENST00000526829 SSBP3Q9BWW4 388 aaPredicted RBP8.81□□□□□ -1
VPS11-202ENST00000526829 OSTCQ9NRP0 149 aa8.81□□□□□ -1
VPS11-202ENST00000526829 TECRQ9NZ01 308 aaKnown RBP8.81□□□□□ -1
VPS11-202ENST00000526829 GAGE2DQ9UEU5 116 aa8.81□□□□□ -1
VPS11-202ENST00000526829 BMPR1BO00238 502 aa8.8□□□□□ -1
VPS11-202ENST00000526829 EDDM3BP56851 147 aa8.8□□□□□ -1
VPS11-202ENST00000526829 RPL31P62899 125 aaKnown RBP8.8□□□□□ -1
VPS11-202ENST00000526829 ANXA2RQ3ZCQ2 193 aa8.8□□□□□ -1
VPS11-202ENST00000526829 OR8B3Q8NGG8 313 aa8.8□□□□□ -1
VPS11-202ENST00000526829 OR8B2Q96RD0 313 aa8.8□□□□□ -1
VPS11-202ENST00000526829 EDA2RQ9HAV5 297 aa8.8□□□□□ -1
VPS11-202ENST00000526829 ARL2-SNX15V9GYD0 113 aa8.8□□□□□ -1
VPS11-202ENST00000526829 C15orf62A8K5M9 175 aa8.79□□□□□ -1
VPS11-202ENST00000526829 OR9G9P0C7N8 305 aa8.79□□□□□ -1
VPS11-202ENST00000526829 IGLC6P0CF74 106 aa8.79□□□□□ -1
VPS11-202ENST00000526829 MYOD1P15172 320 aa8.79□□□□□ -1
VPS11-202ENST00000526829 GCHFRP30047 84 aa8.79□□□□□ -1
VPS11-202ENST00000526829 KIR2DS2P43631 304 aa8.79□□□□□ -1
VPS11-202ENST00000526829 KLF17Q5JT82 389 aaPredicted RBP8.79□□□□□ -1
VPS11-202ENST00000526829 DNAJC9-AS1A6NH13 148 aa8.79□□□□□ -1
VPS11-202ENST00000526829 SH2D7A6NKC9 451 aaPredicted RBP8.79□□□□□ -1
VPS11-202ENST00000526829 TMEM262E9PQX1 116 aa8.79□□□□□ -1
VPS11-202ENST00000526829 ATP5LO75964 103 aa8.79□□□□□ -1
VPS11-202ENST00000526829 PAX8Q06710 450 aa8.79□□□□□ -1
VPS11-202ENST00000526829 EIF4EBP1Q13541 118 aaPredicted RBP8.79□□□□□ -1
VPS11-202ENST00000526829 C1orf195Q5TG92 126 aa8.79□□□□□ -1
VPS11-202ENST00000526829 ZNF645Q8N7E2 425 aa8.79□□□□□ -1
VPS11-202ENST00000526829 TRRAPQ9Y4A5 3859 aa8.78□□□□□ -1
VPS11-202ENST00000526829 IQCF6A8MYZ5 107 aa8.78□□□□□ -1
VPS11-202ENST00000526829 RRHO14718 337 aa8.78□□□□□ -1
VPS11-202ENST00000526829 APCSP02743 223 aa8.78□□□□□ -1
VPS11-202ENST00000526829 CNTFRP26992 372 aa8.78□□□□□ -1
VPS11-202ENST00000526829 WFDC2Q14508 124 aa8.78□□□□□ -1
VPS11-202ENST00000526829 Q6P435 159 aa8.78□□□□□ -1
VPS11-202ENST00000526829 ZNF497Q6ZNH5 498 aa8.78□□□□□ -1
VPS11-202ENST00000526829 ATOH7Q8N100 152 aa8.78□□□□□ -1
VPS11-202ENST00000526829 C1RLQ9NZP8 487 aa8.78□□□□□ -1
VPS11-202ENST00000526829 TP53TG1Q9Y2A0 90 aa8.78□□□□□ -1
VPS11-202ENST00000526829 SMIM27A0A1W2PRY6 76 aa8.77□□□□□ -1
VPS11-202ENST00000526829 FAM181BA6NEQ2 426 aa8.77□□□□□ -1
VPS11-202ENST00000526829 FSTL3O95633 263 aa8.77□□□□□ -1
VPS11-202ENST00000526829 RNASE1P07998 156 aaKnown RBP8.77□□□□□ -1
VPS11-202ENST00000526829 UBE2G1P62253 170 aa8.77□□□□□ -1
VPS11-202ENST00000526829 KLF5Q13887 457 aaPredicted RBP8.77□□□□□ -1
VPS11-202ENST00000526829 LCN12Q6JVE5 192 aa8.77□□□□□ -1
VPS11-202ENST00000526829 BCL6BQ8N143 479 aaPredicted RBP8.77□□□□□ -1
VPS11-202ENST00000526829 FAM19A2Q8N3H0 131 aa8.77□□□□□ -1
VPS11-202ENST00000526829 IGHV3OR16-10A0A075B7F0 116 aa8.77□□□□□ -1.01
VPS11-202ENST00000526829 IGHV3-64DA0A0J9YX35 117 aa8.77□□□□□ -1.01
VPS11-202ENST00000526829 IZUMO1RA6ND01 250 aa8.77□□□□□ -1.01
VPS11-202ENST00000526829 ZNF816Q0VGE8 651 aaPredicted RBP8.77□□□□□ -1.01
VPS11-202ENST00000526829 KHDC1LQ5JSQ8 128 aa8.77□□□□□ -1.01
VPS11-202ENST00000526829 SAMD5Q5TGI4 173 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms