RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 RNF182Q8N6D2 247 aa12.18□□□□□ -0.46
USH1C-204ENST00000526313 PRRC2AP48634 2157 aaKnown RBP12.18□□□□□ -0.46
USH1C-204ENST00000526313 PSMB8P28062 276 aa12.17□□□□□ -0.46
USH1C-204ENST00000526313 PKIAP61925 76 aa12.17□□□□□ -0.46
USH1C-204ENST00000526313 RIGQ13278 110 aa12.17□□□□□ -0.46
USH1C-204ENST00000526313 Q8TAT8 98 aa12.17□□□□□ -0.46
USH1C-204ENST00000526313 NDFIP1Q9BT67 221 aa12.17□□□□□ -0.46
USH1C-204ENST00000526313 PPP1R14DQ9NXH3 145 aa12.17□□□□□ -0.46
USH1C-204ENST00000526313 TMEM189A5PLL7 270 aa12.17□□□□□ -0.46
USH1C-204ENST00000526313 SMAD7O15105 426 aaKnown RBP12.17□□□□□ -0.46
USH1C-204ENST00000526313 IGHV3-11P01762 117 aa12.17□□□□□ -0.46
USH1C-204ENST00000526313 ARMS2P0C7Q2 107 aa12.17□□□□□ -0.46
USH1C-204ENST00000526313 BMI1P35226 326 aa12.17□□□□□ -0.46
USH1C-204ENST00000526313 Q6YL49 198 aa12.17□□□□□ -0.46
USH1C-204ENST00000526313 LOC102724200A0A096LPH7 203 aaPredicted RBP12.16□□□□□ -0.46
USH1C-204ENST00000526313 ZNF324O75467 553 aaPredicted RBP12.16□□□□□ -0.46
USH1C-204ENST00000526313 ERCC8Q13216 396 aa12.16□□□□□ -0.46
USH1C-204ENST00000526313 SIGLECL1Q8N7X8 197 aa12.16□□□□□ -0.46
USH1C-204ENST00000526313 SAMD10Q9BYL1 202 aa12.16□□□□□ -0.46
USH1C-204ENST00000526313 RPS20P60866 119 aaKnown RBP12.16□□□□□ -0.46
USH1C-204ENST00000526313 C9orf47Q6ZRZ4 202 aa12.16□□□□□ -0.46
USH1C-204ENST00000526313 LCNL1Q6ZST4 164 aa12.16□□□□□ -0.46
USH1C-204ENST00000526313 GPHB5Q86YW7 130 aa12.16□□□□□ -0.46
USH1C-204ENST00000526313 NPFFR1Q9GZQ6 430 aa12.16□□□□□ -0.46
USH1C-204ENST00000526313 AGPAT4-IT1Q9H0P7 198 aa12.16□□□□□ -0.46
USH1C-204ENST00000526313 NAGKQ9UJ70 344 aa12.16□□□□□ -0.46
USH1C-204ENST00000526313 ZANQ9Y493 2812 aa12.15□□□□□ -0.46
USH1C-204ENST00000526313 TSTD3H0UI37 97 aa12.15□□□□□ -0.46
USH1C-204ENST00000526313 ZNF493Q6ZR52 646 aa12.15□□□□□ -0.46
USH1C-204ENST00000526313 LINC00469Q8N7U9 141 aa12.15□□□□□ -0.46
USH1C-204ENST00000526313 VPREB3Q9UKI3 123 aa12.15□□□□□ -0.46
USH1C-204ENST00000526313 NAV2Q8IVL1 2488 aa12.14□□□□□ -0.47
USH1C-204ENST00000526313 SOCS3O14543 225 aa12.14□□□□□ -0.47
USH1C-204ENST00000526313 TMEM95Q3KNT9 176 aa12.14□□□□□ -0.47
USH1C-204ENST00000526313 ZNF664Q8N3J9 261 aa12.14□□□□□ -0.47
USH1C-204ENST00000526313 FABP5P3A8MUU1 101 aa12.14□□□□□ -0.47
USH1C-204ENST00000526313 SCGB1D1O95968 90 aa12.14□□□□□ -0.47
USH1C-204ENST00000526313 NIT1Q86X76 327 aa12.14□□□□□ -0.47
USH1C-204ENST00000526313 NRN1Q9NPD7 142 aa12.14□□□□□ -0.47
USH1C-204ENST00000526313 K7EMT4 169 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 IGLC6P0CF74 106 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 CD33P20138 364 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 CTRLP40313 264 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 AMTP48728 403 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 LYZL1Q6UWQ5 148 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 URB1-AS1Q96HZ7 61 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 Q96MF0 132 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 PEF1Q9UBV8 284 aaKnown RBP12.13□□□□□ -0.47
USH1C-204ENST00000526313 RNF114Q9Y508 228 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 ABCA12Q86UK0 2595 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 ZNF138P52744 262 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 DMRTA1Q5VZB9 504 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 C16orf92Q96LL3 132 aa12.13□□□□□ -0.47
USH1C-204ENST00000526313 IGHV7-4-1A0A0J9YVY3 117 aa12.12□□□□□ -0.47
USH1C-204ENST00000526313 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
USH1C-204ENST00000526313 PRR31Q5SQ13 230 aa12.12□□□□□ -0.47
USH1C-204ENST00000526313 IL17RELQ6ZVW7 336 aa12.12□□□□□ -0.47
USH1C-204ENST00000526313 C20orf173Q96LM9 149 aa12.12□□□□□ -0.47
USH1C-204ENST00000526313 APCP25054 2843 aa12.12□□□□□ -0.47
USH1C-204ENST00000526313 CYB5R2Q6BCY4 276 aa12.11□□□□□ -0.47
USH1C-204ENST00000526313 BORCS7Q96B45 105 aa12.11□□□□□ -0.47
USH1C-204ENST00000526313 PRO1933Q9H354 126 aa12.11□□□□□ -0.47
USH1C-204ENST00000526313 TMSB15BA0A087X1C1 80 aa12.11□□□□□ -0.47
USH1C-204ENST00000526313 PMCHP20382 165 aa12.11□□□□□ -0.47
USH1C-204ENST00000526313 DDTP30046 118 aa12.11□□□□□ -0.47
USH1C-204ENST00000526313 TMEM78Q5T7P6 136 aa12.11□□□□□ -0.47
USH1C-204ENST00000526313 Q8N976 141 aa12.11□□□□□ -0.47
USH1C-204ENST00000526313 MYOZ3Q8TDC0 251 aa12.11□□□□□ -0.47
USH1C-204ENST00000526313 CNFNQ9BYD5 112 aa12.11□□□□□ -0.47
USH1C-204ENST00000526313 DAZ1Q9NQZ3 744 aaKnown RBP12.11□□□□□ -0.47
USH1C-204ENST00000526313 HIST1H1AQ02539 215 aaPredicted RBP12.1□□□□□ -0.47
USH1C-204ENST00000526313 FAM19A2Q8N3H0 131 aa12.1□□□□□ -0.47
USH1C-204ENST00000526313 ZNF702PQ9H963 129 aa12.1□□□□□ -0.47
USH1C-204ENST00000526313 SMPXQ9UHP9 88 aa12.1□□□□□ -0.47
USH1C-204ENST00000526313 LENEPQ9Y5L5 61 aa12.1□□□□□ -0.47
USH1C-204ENST00000526313 TM4SF20Q53R12 229 aa12.1□□□□□ -0.47
USH1C-204ENST00000526313 C10orf99Q6UWK7 81 aa12.1□□□□□ -0.47
USH1C-204ENST00000526313 TEX43Q6ZNM6 134 aa12.1□□□□□ -0.47
USH1C-204ENST00000526313 CHCHD1Q96BP2 118 aaKnown RBP12.1□□□□□ -0.47
USH1C-204ENST00000526313 C14orf144Q96I85 54 aa12.1□□□□□ -0.47
USH1C-204ENST00000526313 RHPN1-AS1Q9BWJ2 59 aa12.1□□□□□ -0.47
USH1C-204ENST00000526313 HSBP1O75506 76 aa12.09□□□□□ -0.47
USH1C-204ENST00000526313 FAM106AQ4KMX7 169 aa12.09□□□□□ -0.47
USH1C-204ENST00000526313 REC114Q7Z4M0 266 aa12.09□□□□□ -0.47
USH1C-204ENST00000526313 FER1L6-AS1Q8NA97 138 aa12.09□□□□□ -0.47
USH1C-204ENST00000526313 FOXE3Q13461 319 aa12.08□□□□□ -0.47
USH1C-204ENST00000526313 RNF152Q8N8N0 203 aa12.08□□□□□ -0.47
USH1C-204ENST00000526313 LINC00477Q96M19 166 aa12.08□□□□□ -0.47
USH1C-204ENST00000526313 TPPP3Q9BW30 176 aa12.08□□□□□ -0.47
USH1C-204ENST00000526313 U3KQK5 164 aa12.08□□□□□ -0.47
USH1C-204ENST00000526313 OVOL1O14753 267 aa12.08□□□□□ -0.48
USH1C-204ENST00000526313 HOXA3O43365 443 aaPredicted RBP12.08□□□□□ -0.48
USH1C-204ENST00000526313 ORM1P02763 201 aa12.08□□□□□ -0.48
USH1C-204ENST00000526313 ELANEP08246 267 aa12.08□□□□□ -0.48
USH1C-204ENST00000526313 MXRA5Q9NR99 2828 aa12.08□□□□□ -0.48
USH1C-204ENST00000526313 IGKV3D-20A0A0C4DH25 116 aa12.07□□□□□ -0.48
USH1C-204ENST00000526313 TMEM213A2RRL7 107 aa12.07□□□□□ -0.48
USH1C-204ENST00000526313 FAM104BQ5XKR9 115 aa12.07□□□□□ -0.48
USH1C-204ENST00000526313 RNASEKQ6P5S7 137 aaKnown RBP12.07□□□□□ -0.48
USH1C-204ENST00000526313 Q8N2B8 174 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms